Bibliography
Published sources
Construction of a Multi-Omics database for Paeonia lactiflora: A resource for comprehensive data integration and analysis
Lu et al. · BMC Plant Biology
Provides a recent medicinal-plant multi-omics example with modular pages for genome, transcriptome, tools, pathways, and publications.
Plant norgDB: Plant Nuclear Organelle DNA Database
Noutsos Lab · Website resource
A plant nuclear-organelle DNA database that informs how organelle-related genomic resources can be organized.
Repeat-mediated recombination results in Complex DNA structure of the mitochondrial genome of Trachelospermum jasminoides
Cai et al. · BMC Plant Biology
Demonstrates how repeat-mediated recombination can produce complex plant mitogenome structures.
Advances in plastid transformation for metabolic engineering in higher plants
Yang et al. · aBIOTECH
Reviews plastid transformation and its importance for metabolic engineering in higher plants.
CpGDB : A Comprehensive Database of Chloroplast Genomes
Sajjad et al. · Database
Shows how a large chloroplast-genome collection can support search, download, and marker-oriented exploration.
15 years of GDR: New data and functionality in the Genome Database for Rosaceae
Jung et al. · Nucleic Acids Research
Highlights how a mature published database integrates BLAST, pathway views, comparative modules, and user-facing exploration tools.
A review of the prevalence, utility, and caveats of using chloroplast simple sequence repeats for studies of plant biology
Wheeler et al. · Applications in Plant Sciences
Summarizes the strengths and caveats of chloroplast SSRs as markers in plant biology.
ChloroSSRdb: a repository of perfect and imperfect chloroplastic simple sequence repeats (cpSSRs) of green plants
Sablok et al. · Database
A dedicated cpSSR repository useful for thinking about chloroplast repeat mining and marker development.
Excision of plastid marker genes using directly repeated DNA sequences
Mudd et al. · Methods in Molecular Biology
Useful for understanding direct-repeat behavior in plastid engineering and sequence excision strategies.
Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction
Ye et al. · BMC Bioinformatics
A classic reference for target-specific primer design workflows that combine similarity filtering with primer selection.
ChloroplastDB: the Chloroplast Genome Database
Cui et al. · Nucleic Acids Research
An early chloroplast-genome database that illustrates how plastome resources can be aggregated and browsed systematically.
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Citation
Citing the database
LamiOmicsDB Consortium. LamiOmicsDB: Lamiaceae Multi-Omics Database, v1.
Evidence boundary
How references are used
A cited paper can support a method, source record or family-level interpretation without creating a stable candidate locus. Reference-only evidence remains distinct from accession-backed records throughout the interface.