Coordinate-aware organelle record

Callicarpa rubella f. crenata chloroplast genome

Available OR548043.1 154,067 bp 129 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features

Gene	Type	Group	Strand	Start	End	Length
trnN-GUU	gene	translation-rna	+	1400	1472	72
trnR-ACG	gene	translation-rna	−	2041	2115	74
rrn5	gene	ribosomal-rna	−	2358	2479	121
rrn4.5	gene	ribosomal-rna	−	2734	2837	103
rrn23	gene	ribosomal-rna	−	2936	5745	2809
trnA-UGC	gene	translation-rna	−	5913	6798	885
trnI-GAU	gene	translation-rna	−	6862	7883	1021
rrn16	gene	ribosomal-rna	−	8181	9672	1491
trnV-GAC	gene	translation-rna	−	9917	9989	72
rps7	gene	ribosomal-protein	+	12443	12911	468
ndhB	gene	nad-dehydrogenase	+	13185	15397	2212
trnL-CAA	gene	translation-rna	+	15944	16025	81
ycf15	gene	other	−	16285	16534	249
ycf2	gene	other	−	16615	23476	6861
trnI-CAU	gene	translation-rna	+	23574	23648	74
rpl23	gene	ribosomal-protein	+	23813	24095	282
rpl2	gene	ribosomal-protein	+	24113	25605	1492
trnH-GUG	gene	translation-rna	−	25703	25777	74
psbA	gene	photosystem-ii	−	26127	27186	1059
trnK-UUU	gene	translation-rna	−	27438	30011	2573
matK	gene	other	−	27745	29269	1524
rps16	gene	ribosomal-protein	−	30877	32011	1134
trnQ-UUG	gene	translation-rna	−	33149	33221	72
psbK	gene	photosystem-ii	+	33554	33740	186
psbI	gene	photosystem-ii	+	34131	34242	111
trnS-GCU	gene	translation-rna	−	34359	34447	88
trnG-UCC	gene	translation-rna	+	35154	35915	761
trnR-UCU	gene	translation-rna	+	36091	36163	72
atpA	gene	atp-synthase	−	36267	37791	1524
atpF	gene	atp-synthase	−	37858	39105	1247
atpH	gene	atp-synthase	−	39475	39721	246
atpI	gene	atp-synthase	−	40729	41473	744
rps2	gene	ribosomal-protein	−	41703	42414	711
rpoC	gene	rna-polymerase	−	42630	46812	4182
rpoC1	gene	rna-polymerase	−	46966	49771	2805
rpoB	gene	rna-polymerase	−	49797	53010	3213
trnC-GCA	gene	translation-rna	+	54185	54256	71
petN	gene	cytochrome	+	55087	55177	90
psbM	gene	photosystem-ii	−	56099	56204	105
trnD-GUC	gene	translation-rna	−	56725	56799	74
trnY-GUA	gene	translation-rna	−	56907	56991	84
trnE-UUC	gene	translation-rna	−	57050	57123	73
trnT-GGU	gene	translation-rna	+	57679	57751	72
psbD	gene	photosystem-ii	+	59130	60192	1062
psbC	gene	photosystem-ii	+	60139	60787	648
trnS-UGA	gene	translation-rna	−	61802	61895	93
psbZ	gene	photosystem-ii	+	62224	62413	189
trnG-GCC	gene	translation-rna	+	62688	62759	71
rps14	gene	ribosomal-protein	−	63129	63432	303
psaB	gene	photosystem-i	−	63554	65759	2205
psaA	gene	photosystem-i	−	65784	68031	2247
ycf3	gene	other	−	68739	70694	1955
trnS-GGA	gene	translation-rna	+	71528	71615	87
rps4	gene	ribosomal-protein	−	71895	72501	606
trnT-UGU	gene	translation-rna	−	72867	72940	73
trnL-UAA	gene	translation-rna	+	73609	74187	578
trnF-GAA	gene	translation-rna	+	74527	74600	73
ndhJ	gene	nad-dehydrogenase	−	75249	75726	477
ndhK	gene	nad-dehydrogenase	−	75826	76504	678
ndhC	gene	nad-dehydrogenase	−	76557	76920	363
trnV-UAC	gene	translation-rna	−	78108	78761	653
trnM-CAU	gene	translation-rna	+	78942	79015	73
atpE	gene	atp-synthase	−	79222	79624	402
atpB	gene	atp-synthase	−	79620	81117	1497
rbcL	gene	other	+	81902	83342	1440
accD	gene	other	+	83957	85502	1545
psaI	gene	photosystem-i	+	86204	86315	111
ycf4	gene	other	+	86754	87309	555
cemA	gene	other	+	87956	88646	690
petA	gene	cytochrome	+	88835	89798	963
psbJ	gene	photosystem-ii	−	90724	90847	123
psbL	gene	photosystem-ii	−	90980	91097	117
psbF	gene	photosystem-ii	−	91120	91240	120
psbE	gene	photosystem-ii	−	91254	91506	252
petL	gene	cytochrome	+	92437	92533	96
petG	gene	cytochrome	+	92707	92821	114
trnW-CCA	gene	translation-rna	−	92943	93017	74
trnP-UGG	gene	translation-rna	−	93178	93252	74
psaJ	gene	photosystem-i	+	93643	93778	135
rpl33	gene	ribosomal-protein	+	94257	94458	201
rps18	gene	ribosomal-protein	+	94628	94934	306
rpl20	gene	ribosomal-protein	−	95168	95555	387
rps12	gene	ribosomal-protein	−	96370	124665	28295
clpP	gene	other	−	96629	98573	1944
psbB	gene	photosystem-ii	+	99027	100554	1527
psbT	gene	photosystem-ii	+	100746	100854	108
psbN	gene	photosystem-ii	−	100914	101046	132
psbH	gene	photosystem-ii	+	101133	101373	240
petB	gene	cytochrome	+	101497	102877	1380
petD	gene	cytochrome	+	103065	104290	1225
rpoA	gene	rna-polymerase	−	104466	105480	1014
rps11	gene	ribosomal-protein	−	105551	105968	417
rpl36	gene	ribosomal-protein	−	106069	106183	114
infA	gene	other	−	106278	106512	234
rps8	gene	ribosomal-protein	−	106636	107041	405
rpl14	gene	ribosomal-protein	−	107213	107582	369
rpl16	gene	ribosomal-protein	−	107708	109011	1303
rps3	gene	ribosomal-protein	−	109153	109816	663
rpl22	gene	ribosomal-protein	−	109825	110263	438
rps19	gene	ribosomal-protein	−	110322	110601	279
rpl2	gene	ribosomal-protein	−	110656	112148	1492
rpl23	gene	ribosomal-protein	−	112166	112448	282
trnI-CAU	gene	translation-rna	−	112613	112687	74
ycf2	gene	other	+	112785	119646	6861
ycf15	gene	other	+	119727	119976	249
trnL-CAA	gene	translation-rna	−	120236	120317	81
ndhB	gene	nad-dehydrogenase	−	120864	123076	2212
rps7	gene	ribosomal-protein	−	123350	123818	468
trnV-GAC	gene	translation-rna	+	126272	126344	72
rrn16	gene	ribosomal-rna	+	126589	128080	1491
trnI-GAU	gene	translation-rna	+	128378	129399	1021
trnA-UGC	gene	translation-rna	+	129463	130348	885
rrn23	gene	ribosomal-rna	+	130516	133325	2809
rrn4.5	gene	ribosomal-rna	+	133424	133527	103
rrn5	gene	ribosomal-rna	+	133782	133903	121
trnR-ACG	gene	translation-rna	+	134146	134220	74
trnN-GUU	gene	translation-rna	−	134789	134861	72
ndhF	gene	nad-dehydrogenase	−	136265	138509	2244
rpl32	gene	ribosomal-protein	+	139027	139204	177
trnL-UAG	gene	translation-rna	+	139985	140065	80
ccsA	gene	other	+	140149	141121	972
ndhD	gene	nad-dehydrogenase	−	141387	142776	1389
psaC	gene	photosystem-i	−	143010	143256	246
ndhE	gene	nad-dehydrogenase	−	143486	143792	306
ndhG	gene	nad-dehydrogenase	−	144005	144536	531
ndhI	gene	nad-dehydrogenase	−	144885	145392	507
ndhA	gene	nad-dehydrogenase	−	145467	147652	2185
ndhH	gene	nad-dehydrogenase	−	147653	148835	1182
rps15	gene	ribosomal-protein	−	148931	149204	273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR548043.1DNA · accDOR548043DNA · atpBOR548043DNA · matKOR548043DNA · ndhFOR548043DNA · psbAOR548043DNA · rbcLOR548043DNA · rps12OR548043