Dracocephalum fragile chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV200169.1 · 56–129 bp · −
psbA · PV200169.1 · 503–1,561 bp · −
trnK-UUU · PV200169.1 · 1,793–4,381 bp · −
matK · PV200169.1 · 2,082–3,641 bp · −
rps16 · PV200169.1 · 4,637–5,770 bp · −
trnQ-UUG · PV200169.1 · 6,683–6,754 bp · −
trnS-GCU · PV200169.1 · 7,911–7,998 bp · −
atpA · PV200169.1 · 9,783–11,306 bp · −
atpF · PV200169.1 · 11,415–12,662 bp · −
atpH · PV200169.1 · 12,932–13,177 bp · −
atpI · PV200169.1 · 13,950–14,693 bp · −
rps2 · PV200169.1 · 14,917–15,537 bp · −
rpoC2 · PV200169.1 · 15,829–20,022 bp · −
rpoC1 · PV200169.1 · 20,183–22,987 bp · −
rpoB · PV200169.1 · 23,014–26,226 bp · −
psbM · PV200169.1 · 28,528–28,632 bp · −
trnD-GUC · PV200169.1 · 29,148–29,221 bp · −
trnY-GUA · PV200169.1 · 29,338–29,421 bp · −
trnE-UUC · PV200169.1 · 29,489–29,561 bp · −
trnS-UGA · PV200169.1 · 34,072–34,164 bp · −
trnfM-CAU · PV200169.1 · 35,191–35,264 bp · −
rps14 · PV200169.1 · 35,424–35,726 bp · −
psaB · PV200169.1 · 35,854–38,058 bp · −
psaA · PV200169.1 · 38,084–40,336 bp · −
ycf3 · PV200169.1 · 41,135–43,082 bp · −
rps4 · PV200169.1 · 43,971–44,576 bp · −
trnT-UGU · PV200169.1 · 44,988–45,060 bp · −
ndhJ · PV200169.1 · 47,332–47,808 bp · −
ndhK · PV200169.1 · 47,920–48,597 bp · −
ndhC · PV200169.1 · 48,649–49,011 bp · −
trnV-UAC · PV200169.1 · 49,962–50,610 bp · −
atpE · PV200169.1 · 51,068–51,469 bp · −
atpB · PV200169.1 · 51,466–52,962 bp · −
psbJ · PV200169.1 · 62,509–62,631 bp · −
psbL · PV200169.1 · 62,766–62,882 bp · −
psbF · PV200169.1 · 62,906–63,025 bp · −
psbE · PV200169.1 · 63,040–63,291 bp · −
trnW-CCA · PV200169.1 · 64,678–64,751 bp · −
trnP-UGG · PV200169.1 · 64,923–64,996 bp · −
rpl20 · PV200169.1 · 66,737–67,099 bp · −
rps12 · PV200169.1 · 67,919–68,032 bp · −
rps12 · PV200169.1 · 95,389–96,172 bp · −
clpP · PV200169.1 · 68,159–70,072 bp · −
psbN · PV200169.1 · 72,426–72,557 bp · −
rpoA · PV200169.1 · 75,956–76,963 bp · −
rps11 · PV200169.1 · 77,228–77,455 bp · −
rpl36 · PV200169.1 · 77,564–77,677 bp · −
infA · PV200169.1 · 77,773–78,006 bp · −
rps8 · PV200169.1 · 78,132–78,536 bp · −
rpl14 · PV200169.1 · 78,725–79,093 bp · −
rpl16 · PV200169.1 · 79,239–80,530 bp · −
rps3 · PV200169.1 · 80,681–81,343 bp · −
rpl22 · PV200169.1 · 81,328–81,801 bp · −
rps19 · PV200169.1 · 81,878–82,156 bp · −
rpl2 · PV200169.1 · 82,213–83,698 bp · −
trnI-CAU · PV200169.1 · 84,160–84,233 bp · −
trnL-CAA · PV200169.1 · 91,746–91,826 bp · −
ndhB · PV200169.1 · 92,394–94,603 bp · −
rps7 · PV200169.1 · 94,869–95,336 bp · −
trnN-GUU · PV200169.1 · 106,270–106,341 bp · −
ndhF · PV200169.1 · 107,695–109,926 bp · −
ndhD · PV200169.1 · 112,480–114,009 bp · −
psaC · PV200169.1 · 114,101–114,346 bp · −
ndhE · PV200169.1 · 114,599–114,904 bp · −
ndhG · PV200169.1 · 115,126–115,656 bp · −
ndhI · PV200169.1 · 115,769–116,275 bp · −
ndhA · PV200169.1 · 116,356–118,455 bp · −
ndhH · PV200169.1 · 118,457–119,692 bp · −
rps15 · PV200169.1 · 119,738–120,010 bp · −
trnR-ACG · PV200169.1 · 126,884–126,957 bp · −
rrn5 · PV200169.1 · 127,206–127,326 bp · −
rrn4.5 · PV200169.1 · 127,593–127,695 bp · −
rrn23 · PV200169.1 · 127,794–130,604 bp · −
trnA-UGC · PV200169.1 · 130,757–131,630 bp · −
trnI-GAU · PV200169.1 · 131,695–132,719 bp · −
rrn16 · PV200169.1 · 133,018–134,508 bp · −
trnV-GAC · PV200169.1 · 134,737–134,808 bp · −
ycf15 · PV200169.1 · 141,128–141,376 bp · −
ycf2 · PV200169.1 · 141,467–148,291 bp · −
psbK · PV200169.1 · 7,151–7,336 bp · +
psbI · PV200169.1 · 7,684–7,794 bp · +
trnG-UCC · PV200169.1 · 8,662–9,421 bp · +
trnR-UCU · PV200169.1 · 9,607–9,678 bp · +
trnC-GCA · PV200169.1 · 27,243–27,313 bp · +
petN · PV200169.1 · 27,491–27,580 bp · +
trnT-GGU · PV200169.1 · 30,113–30,184 bp · +
psbD · PV200169.1 · 31,391–32,452 bp · +
psbC · PV200169.1 · 32,400–33,821 bp · +
psbZ · PV200169.1 · 34,499–34,687 bp · +
trnG-GCC · PV200169.1 · 34,955–35,025 bp · +
trnS-GGA · PV200169.1 · 43,587–43,673 bp · +
trnL-UAA · PV200169.1 · 45,771–46,361 bp · +
trnF-GAA · PV200169.1 · 46,642–46,714 bp · +
trnM-CAU · PV200169.1 · 50,791–50,863 bp · +
rbcL · PV200169.1 · 53,759–55,192 bp · +
accD · PV200169.1 · 55,898–57,364 bp · +
psaI · PV200169.1 · 57,824–57,934 bp · +
ycf4 · PV200169.1 · 58,391–58,945 bp · +
cemA · PV200169.1 · 59,598–60,287 bp · +
petA · PV200169.1 · 60,512–61,474 bp · +
petL · PV200169.1 · 64,174–64,269 bp · +
petG · PV200169.1 · 64,446–64,559 bp · +
psaJ · PV200169.1 · 65,276–65,410 bp · +
rpl33 · PV200169.1 · 65,820–66,020 bp · +
rps12 · PV200169.1 · 136,441–137,224 bp · +
psbB · PV200169.1 · 70,544–72,070 bp · +
psbT · PV200169.1 · 72,258–72,365 bp · +
psbH · PV200169.1 · 72,663–72,884 bp · +
petB · PV200169.1 · 73,010–74,393 bp · +
petD · PV200169.1 · 74,582–75,772 bp · +
ycf2 · PV200169.1 · 84,322–91,146 bp · +
ycf15 · PV200169.1 · 91,237–91,485 bp · +
trnV-GAC · PV200169.1 · 97,805–97,876 bp · +
rrn16 · PV200169.1 · 98,105–99,595 bp · +
trnI-GAU · PV200169.1 · 99,894–100,918 bp · +
trnA-UGC · PV200169.1 · 100,983–101,856 bp · +
rrn23 · PV200169.1 · 102,009–104,819 bp · +
rrn4.5 · PV200169.1 · 104,918–105,020 bp · +
rrn5 · PV200169.1 · 105,287–105,407 bp · +
trnR-ACG · PV200169.1 · 105,656–105,729 bp · +
rpl32 · PV200169.1 · 110,398–110,568 bp · +
trnL-UAG · PV200169.1 · 111,093–111,172 bp · +
ccsA · PV200169.1 · 111,266–112,243 bp · +
trnN-GUU · PV200169.1 · 126,272–126,343 bp · +
rps7 · PV200169.1 · 137,277–137,744 bp · +
ndhB · PV200169.1 · 138,010–140,219 bp · +
trnL-CAA · PV200169.1 · 140,787–140,867 bp · +
trnI-CAU · PV200169.1 · 148,380–148,453 bp · +
rpl23 · PV200169.1 · 148,615–148,896 bp · +
rpl2 · PV200169.1 · 148,915–150,400 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Dracocephalum fragile
ANNOTATED PLASTOME
PV200169.1
150,549 bp · 129 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37637 75274 112912 150549 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
130 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 56 129 74 Locate
psbA gene − 503 1561 1059 Locate
trnK-UUU gene − 1793 4381 2589 Locate
matK gene − 2082 3641 1560 Locate
rps16 gene − 4637 5770 1134 Locate
trnQ-UUG gene − 6683 6754 72 Locate
psbK gene + 7151 7336 186 Locate
psbI gene + 7684 7794 111 Locate
trnS-GCU gene − 7911 7998 88 Locate
trnG-UCC gene + 8662 9421 760 Locate
trnR-UCU gene + 9607 9678 72 Locate
atpA gene − 9783 11306 1524 Locate
atpF gene − 11415 12662 1248 Locate
atpH gene − 12932 13177 246 Locate
atpI gene − 13950 14693 744 Locate
rps2 gene − 14917 15537 621 Locate
rpoC2 gene − 15829 20022 4194 Locate
rpoC1 gene − 20183 22987 2805 Locate
rpoB gene − 23014 26226 3213 Locate
trnC-GCA gene + 27243 27313 71 Locate
petN gene + 27491 27580 90 Locate
psbM gene − 28528 28632 105 Locate
trnD-GUC gene − 29148 29221 74 Locate
trnY-GUA gene − 29338 29421 84 Locate
trnE-UUC gene − 29489 29561 73 Locate
trnT-GGU gene + 30113 30184 72 Locate
psbD gene + 31391 32452 1062 Locate
psbC gene + 32400 33821 1422 Locate
trnS-UGA gene − 34072 34164 93 Locate
psbZ gene + 34499 34687 189 Locate
trnG-GCC gene + 34955 35025 71 Locate
trnfM-CAU gene − 35191 35264 74 Locate
rps14 gene − 35424 35726 303 Locate
psaB gene − 35854 38058 2205 Locate
psaA gene − 38084 40336 2253 Locate
ycf3 gene − 41135 43082 1948 Locate
trnS-GGA gene + 43587 43673 87 Locate
rps4 gene − 43971 44576 606 Locate
trnT-UGU gene − 44988 45060 73 Locate
trnL-UAA gene + 45771 46361 591 Locate
trnF-GAA gene + 46642 46714 73 Locate
ndhJ gene − 47332 47808 477 Locate
ndhK gene − 47920 48597 678 Locate
ndhC gene − 48649 49011 363 Locate
trnV-UAC gene − 49962 50610 649 Locate
trnM-CAU gene + 50791 50863 73 Locate
atpE gene − 51068 51469 402 Locate
atpB gene − 51466 52962 1497 Locate
rbcL gene + 53759 55192 1434 Locate
accD gene + 55898 57364 1467 Locate
psaI gene + 57824 57934 111 Locate
ycf4 gene + 58391 58945 555 Locate
cemA gene + 59598 60287 690 Locate
petA gene + 60512 61474 963 Locate
psbJ gene − 62509 62631 123 Locate
psbL gene − 62766 62882 117 Locate
psbF gene − 62906 63025 120 Locate
psbE gene − 63040 63291 252 Locate
petL gene + 64174 64269 96 Locate
petG gene + 64446 64559 114 Locate
trnW-CCA gene − 64678 64751 74 Locate
trnP-UGG gene − 64923 64996 74 Locate
psaJ gene + 65276 65410 135 Locate
rpl33 gene + 65820 66020 201 Locate
rpl20 gene − 66737 67099 363 Locate
rps12 gene − 67919 68032 114 Locate
clpP gene − 68159 70072 1914 Locate
psbB gene + 70544 72070 1527 Locate
psbT gene + 72258 72365 108 Locate
psbN gene − 72426 72557 132 Locate
psbH gene + 72663 72884 222 Locate
petB gene + 73010 74393 1384 Locate
petD gene + 74582 75772 1191 Locate
rpoA gene − 75956 76963 1008 Locate
rps11 gene − 77228 77455 228 Locate
rpl36 gene − 77564 77677 114 Locate
infA gene − 77773 78006 234 Locate
rps8 gene − 78132 78536 405 Locate
rpl14 gene − 78725 79093 369 Locate
rpl16 gene − 79239 80530 1292 Locate
rps3 gene − 80681 81343 663 Locate
rpl22 gene − 81328 81801 474 Locate
rps19 gene − 81878 82156 279 Locate
rpl2 gene − 82213 83698 1486 Locate
trnI-CAU gene − 84160 84233 74 Locate
ycf2 gene + 84322 91146 6825 Locate
ycf15 gene + 91237 91485 249 Locate
trnL-CAA gene − 91746 91826 81 Locate
ndhB gene − 92394 94603 2210 Locate
rps7 gene − 94869 95336 468 Locate
rps12 gene − 95389 96172 784 Locate
trnV-GAC gene + 97805 97876 72 Locate
rrn16 gene + 98105 99595 1491 Locate
trnI-GAU gene + 99894 100918 1025 Locate
trnA-UGC gene + 100983 101856 874 Locate
rrn23 gene + 102009 104819 2811 Locate
rrn4.5 gene + 104918 105020 103 Locate
rrn5 gene + 105287 105407 121 Locate
trnR-ACG gene + 105656 105729 74 Locate
trnN-GUU gene − 106270 106341 72 Locate
ndhF gene − 107695 109926 2232 Locate
rpl32 gene + 110398 110568 171 Locate
trnL-UAG gene + 111093 111172 80 Locate
ccsA gene + 111266 112243 978 Locate
ndhD gene − 112480 114009 1530 Locate
psaC gene − 114101 114346 246 Locate
ndhE gene − 114599 114904 306 Locate
ndhG gene − 115126 115656 531 Locate
ndhI gene − 115769 116275 507 Locate
ndhA gene − 116356 118455 2100 Locate
ndhH gene − 118457 119692 1236 Locate
rps15 gene − 119738 120010 273 Locate
trnN-GUU gene + 126272 126343 72 Locate
trnR-ACG gene − 126884 126957 74 Locate
rrn5 gene − 127206 127326 121 Locate
rrn4.5 gene − 127593 127695 103 Locate
rrn23 gene − 127794 130604 2811 Locate
trnA-UGC gene − 130757 131630 874 Locate
trnI-GAU gene − 131695 132719 1025 Locate
rrn16 gene − 133018 134508 1491 Locate
trnV-GAC gene − 134737 134808 72 Locate
rps12 gene + 136441 137224 784 Locate
rps7 gene + 137277 137744 468 Locate
ndhB gene + 138010 140219 2210 Locate
trnL-CAA gene + 140787 140867 81 Locate
ycf15 gene − 141128 141376 249 Locate
ycf2 gene − 141467 148291 6825 Locate
trnI-CAU gene + 148380 148453 74 Locate
rpl23 gene + 148615 148896 282 Locate
rpl2 gene + 148915 150400 1486 Locate
Status Available
Accession PV200169.1
Length 150,549 bp
GC content 37.8%
Annotated genes 129
Gene sequence records 7
Translation Rna 37 Photosystem Ii 15 Other 13 Ribosomal Protein 24 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources