Coordinate-aware organelle record

Dracocephalum fragile chloroplast genome

Available PV200169.1 150,549 bp 129 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 56-129 bp · − strandpsbA · gene · 503-1,561 bp · − strandtrnK-UUU · gene · 1,793-4,381 bp · − strandmatK · gene · 2,082-3,641 bp · − strandrps16 · gene · 4,637-5,770 bp · − strandtrnQ-UUG · gene · 6,683-6,754 bp · − strandpsbK · gene · 7,151-7,336 bp · + strandpsbI · gene · 7,684-7,794 bp · + strandtrnS-GCU · gene · 7,911-7,998 bp · − strandtrnG-UCC · gene · 8,662-9,421 bp · + strandtrnR-UCU · gene · 9,607-9,678 bp · + strandatpA · gene · 9,783-11,306 bp · − strandatpF · gene · 11,415-12,662 bp · − strandatpH · gene · 12,932-13,177 bp · − strandatpI · gene · 13,950-14,693 bp · − strandrps2 · gene · 14,917-15,537 bp · − strandrpoC2 · gene · 15,829-20,022 bp · − strandrpoC1 · gene · 20,183-22,987 bp · − strandrpoB · gene · 23,014-26,226 bp · − strandtrnC-GCA · gene · 27,243-27,313 bp · + strandpetN · gene · 27,491-27,580 bp · + strandpsbM · gene · 28,528-28,632 bp · − strandtrnD-GUC · gene · 29,148-29,221 bp · − strandtrnY-GUA · gene · 29,338-29,421 bp · − strandtrnE-UUC · gene · 29,489-29,561 bp · − strandtrnT-GGU · gene · 30,113-30,184 bp · + strandpsbD · gene · 31,391-32,452 bp · + strandpsbC · gene · 32,400-33,821 bp · + strandtrnS-UGA · gene · 34,072-34,164 bp · − strandpsbZ · gene · 34,499-34,687 bp · + strandtrnG-GCC · gene · 34,955-35,025 bp · + strandtrnfM-CAU · gene · 35,191-35,264 bp · − strandrps14 · gene · 35,424-35,726 bp · − strandpsaB · gene · 35,854-38,058 bp · − strandpsaA · gene · 38,084-40,336 bp · − strandycf3 · gene · 41,135-43,082 bp · − strandtrnS-GGA · gene · 43,587-43,673 bp · + strandrps4 · gene · 43,971-44,576 bp · − strandtrnT-UGU · gene · 44,988-45,060 bp · − strandtrnL-UAA · gene · 45,771-46,361 bp · + strandtrnF-GAA · gene · 46,642-46,714 bp · + strandndhJ · gene · 47,332-47,808 bp · − strandndhK · gene · 47,920-48,597 bp · − strandndhC · gene · 48,649-49,011 bp · − strandtrnV-UAC · gene · 49,962-50,610 bp · − strandtrnM-CAU · gene · 50,791-50,863 bp · + strandatpE · gene · 51,068-51,469 bp · − strandatpB · gene · 51,466-52,962 bp · − strandrbcL · gene · 53,759-55,192 bp · + strandaccD · gene · 55,898-57,364 bp · + strandpsaI · gene · 57,824-57,934 bp · + strandycf4 · gene · 58,391-58,945 bp · + strandcemA · gene · 59,598-60,287 bp · + strandpetA · gene · 60,512-61,474 bp · + strandpsbJ · gene · 62,509-62,631 bp · − strandpsbL · gene · 62,766-62,882 bp · − strandpsbF · gene · 62,906-63,025 bp · − strandpsbE · gene · 63,040-63,291 bp · − strandpetL · gene · 64,174-64,269 bp · + strandpetG · gene · 64,446-64,559 bp · + strandtrnW-CCA · gene · 64,678-64,751 bp · − strandtrnP-UGG · gene · 64,923-64,996 bp · − strandpsaJ · gene · 65,276-65,410 bp · + strandrpl33 · gene · 65,820-66,020 bp · + strandrpl20 · gene · 66,737-67,099 bp · − strandrps12 · gene · 67,919-96,172 bp · − strandrps12 · gene · 67,919-137,224 bp · + strandclpP · gene · 68,159-70,072 bp · − strandpsbB · gene · 70,544-72,070 bp · + strandpsbT · gene · 72,258-72,365 bp · + strandpsbN · gene · 72,426-72,557 bp · − strandpsbH · gene · 72,663-72,884 bp · + strandpetB · gene · 73,010-74,393 bp · + strandpetD · gene · 74,582-75,772 bp · + strandrpoA · gene · 75,956-76,963 bp · − strandrps11 · gene · 77,228-77,455 bp · − strandrpl36 · gene · 77,564-77,677 bp · − strandinfA · gene · 77,773-78,006 bp · − strandrps8 · gene · 78,132-78,536 bp · − strandrpl14 · gene · 78,725-79,093 bp · − strandrpl16 · gene · 79,239-80,530 bp · − strandrps3 · gene · 80,681-81,343 bp · − strandrpl22 · gene · 81,328-81,801 bp · − strandrps19 · gene · 81,878-82,156 bp · − strandrpl2 · gene · 82,213-83,698 bp · − strandtrnI-CAU · gene · 84,160-84,233 bp · − strandycf2 · gene · 84,322-91,146 bp · + strandycf15 · gene · 91,237-91,485 bp · + strandtrnL-CAA · gene · 91,746-91,826 bp · − strandndhB · gene · 92,394-94,603 bp · − strandrps7 · gene · 94,869-95,336 bp · − strandtrnV-GAC · gene · 97,805-97,876 bp · + strandrrn16 · gene · 98,105-99,595 bp · + strandtrnI-GAU · gene · 99,894-100,918 bp · + strandtrnA-UGC · gene · 100,983-101,856 bp · + strandrrn23 · gene · 102,009-104,819 bp · + strandrrn4.5 · gene · 104,918-105,020 bp · + strandrrn5 · gene · 105,287-105,407 bp · + strandtrnR-ACG · gene · 105,656-105,729 bp · + strandtrnN-GUU · gene · 106,270-106,341 bp · − strandndhF · gene · 107,695-109,926 bp · − strandrpl32 · gene · 110,398-110,568 bp · + strandtrnL-UAG · gene · 111,093-111,172 bp · + strandccsA · gene · 111,266-112,243 bp · + strandndhD · gene · 112,480-114,009 bp · − strandpsaC · gene · 114,101-114,346 bp · − strandndhE · gene · 114,599-114,904 bp · − strandndhG · gene · 115,126-115,656 bp · − strandndhI · gene · 115,769-116,275 bp · − strandndhA · gene · 116,356-118,455 bp · − strandndhH · gene · 118,457-119,692 bp · − strandrps15 · gene · 119,738-120,010 bp · − strandtrnN-GUU · gene · 126,272-126,343 bp · + strandtrnR-ACG · gene · 126,884-126,957 bp · − strandrrn5 · gene · 127,206-127,326 bp · − strandrrn4.5 · gene · 127,593-127,695 bp · − strandrrn23 · gene · 127,794-130,604 bp · − strandtrnA-UGC · gene · 130,757-131,630 bp · − strandtrnI-GAU · gene · 131,695-132,719 bp · − strandrrn16 · gene · 133,018-134,508 bp · − strandtrnV-GAC · gene · 134,737-134,808 bp · − strandrps7 · gene · 137,277-137,744 bp · + strandndhB · gene · 138,010-140,219 bp · + strandtrnL-CAA · gene · 140,787-140,867 bp · + strandycf15 · gene · 141,128-141,376 bp · − strandycf2 · gene · 141,467-148,291 bp · − strandtrnI-CAU · gene · 148,380-148,453 bp · + strandrpl23 · gene · 148,615-148,896 bp · + strandrpl2 · gene · 148,915-150,400 bp · + strandDracocephalum fragileANNOTATED PLASTOMEPV200169.1150,549 bp · 129 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PV200169.1Features: 129 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−5512974
psbAgenephotosystem-ii−50215611059
trnK-UUUgenetranslation-rna−179243812589
matKgeneother−208136411560
rps16generibosomal-protein−463657701134
trnQ-UUGgenetranslation-rna−6682675472
psbKgenephotosystem-ii+71507336186
psbIgenephotosystem-ii+76837794111
trnS-GCUgenetranslation-rna−7910799888
trnG-UCCgenetranslation-rna+86619421760
trnR-UCUgenetranslation-rna+9606967872
atpAgeneatp-synthase−9782113061524
atpFgeneatp-synthase−11414126621248
atpHgeneatp-synthase−1293113177246
atpIgeneatp-synthase−1394914693744
rps2generibosomal-protein−1491615537621
rpoC2generna-polymerase−15828200224194
rpoC1generna-polymerase−20182229872805
rpoBgenerna-polymerase−23013262263213
trnC-GCAgenetranslation-rna+272422731371
petNgenecytochrome+274902758090
psbMgenephotosystem-ii−2852728632105
trnD-GUCgenetranslation-rna−291472922174
trnY-GUAgenetranslation-rna−293372942184
trnE-UUCgenetranslation-rna−294882956173
trnT-GGUgenetranslation-rna+301123018472
psbDgenephotosystem-ii+31390324521062
psbCgenephotosystem-ii+32399338211422
trnS-UGAgenetranslation-rna−340713416493
psbZgenephotosystem-ii+3449834687189
trnG-GCCgenetranslation-rna+349543502571
trnfM-CAUgenetranslation-rna−351903526474
rps14generibosomal-protein−3542335726303
psaBgenephotosystem-i−35853380582205
psaAgenephotosystem-i−38083403362253
ycf3geneother−41134430821948
trnS-GGAgenetranslation-rna+435864367387
rps4generibosomal-protein−4397044576606
trnT-UGUgenetranslation-rna−449874506073
trnL-UAAgenetranslation-rna+4577046361591
trnF-GAAgenetranslation-rna+466414671473
ndhJgenenad-dehydrogenase−4733147808477
ndhKgenenad-dehydrogenase−4791948597678
ndhCgenenad-dehydrogenase−4864849011363
trnV-UACgenetranslation-rna−4996150610649
trnM-CAUgenetranslation-rna+507905086373
atpEgeneatp-synthase−5106751469402
atpBgeneatp-synthase−51465529621497
rbcLgeneother+53758551921434
accDgeneother+55897573641467
psaIgenephotosystem-i+5782357934111
ycf4geneother+5839058945555
cemAgeneother+5959760287690
petAgenecytochrome+6051161474963
psbJgenephotosystem-ii−6250862631123
psbLgenephotosystem-ii−6276562882117
psbFgenephotosystem-ii−6290563025120
psbEgenephotosystem-ii−6303963291252
petLgenecytochrome+641736426996
petGgenecytochrome+6444564559114
trnW-CCAgenetranslation-rna−646776475174
trnP-UGGgenetranslation-rna−649226499674
psaJgenephotosystem-i+6527565410135
rpl33generibosomal-protein+6581966020201
rpl20generibosomal-protein−6673667099363
rps12generibosomal-protein−679189617228254
rps12generibosomal-protein+6791813722469306
clpPgeneother−68158700721914
psbBgenephotosystem-ii+70543720701527
psbTgenephotosystem-ii+7225772365108
psbNgenephotosystem-ii−7242572557132
psbHgenephotosystem-ii+7266272884222
petBgenecytochrome+73009743931384
petDgenecytochrome+74581757721191
rpoAgenerna-polymerase−75955769631008
rps11generibosomal-protein−7722777455228
rpl36generibosomal-protein−7756377677114
infAgeneother−7777278006234
rps8generibosomal-protein−7813178536405
rpl14generibosomal-protein−7872479093369
rpl16generibosomal-protein−79238805301292
rps3generibosomal-protein−8068081343663
rpl22generibosomal-protein−8132781801474
rps19generibosomal-protein−8187782156279
rpl2generibosomal-protein−82212836981486
trnI-CAUgenetranslation-rna−841598423374
ycf2geneother+84321911466825
ycf15geneother+9123691485249
trnL-CAAgenetranslation-rna−917459182681
ndhBgenenad-dehydrogenase−92393946032210
rps7generibosomal-protein−9486895336468
trnV-GACgenetranslation-rna+978049787672
rrn16generibosomal-rna+98104995951491
trnI-GAUgenetranslation-rna+998931009181025
trnA-UGCgenetranslation-rna+100982101856874
rrn23generibosomal-rna+1020081048192811
rrn4.5generibosomal-rna+104917105020103
rrn5generibosomal-rna+105286105407121
trnR-ACGgenetranslation-rna+10565510572974
trnN-GUUgenetranslation-rna−10626910634172
ndhFgenenad-dehydrogenase−1076941099262232
rpl32generibosomal-protein+110397110568171
trnL-UAGgenetranslation-rna+11109211117280
ccsAgeneother+111265112243978
ndhDgenenad-dehydrogenase−1124791140091530
psaCgenephotosystem-i−114100114346246
ndhEgenenad-dehydrogenase−114598114904306
ndhGgenenad-dehydrogenase−115125115656531
ndhIgenenad-dehydrogenase−115768116275507
ndhAgenenad-dehydrogenase−1163551184552100
ndhHgenenad-dehydrogenase−1184561196921236
rps15generibosomal-protein−119737120010273
trnN-GUUgenetranslation-rna+12627112634372
trnR-ACGgenetranslation-rna−12688312695774
rrn5generibosomal-rna−127205127326121
rrn4.5generibosomal-rna−127592127695103
rrn23generibosomal-rna−1277931306042811
trnA-UGCgenetranslation-rna−130756131630874
trnI-GAUgenetranslation-rna−1316941327191025
rrn16generibosomal-rna−1330171345081491
trnV-GACgenetranslation-rna−13473613480872
rps7generibosomal-protein+137276137744468
ndhBgenenad-dehydrogenase+1380091402192210
trnL-CAAgenetranslation-rna+14078614086781
ycf15geneother−141127141376249
ycf2geneother−1414661482916825
trnI-CAUgenetranslation-rna+14837914845374
rpl23generibosomal-protein+148614148896282
rpl2generibosomal-protein+1489141504001486

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources