Pairwise homolog comparison

Sequence alignment workspace

Choose database records or paste two sequences, select global or local alignment, and inspect score, identity, positives and the column-preserving alignment.

Alignment input

Ready
Use indexed database records
or paste both sequences
Reset

Alignment result

Summary metrics and the original column correspondence are shown together.

Ready to align

Select two indexed records or paste two sequences. The summary and alignment viewer will appear here.