Ajuga campylanthoides chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnR-UCU · MN814852.1 · 1,630–1,701 bp · −
trnG-UCC · MN814852.1 · 1,886–2,646 bp · −
psbI · MN814852.1 · 3,534–3,644 bp · −
psbK · MN814852.1 · 4,027–4,212 bp · −
rpl2 · MN814852.1 · 11,854–13,346 bp · −
rpl23 · MN814852.1 · 13,365–13,646 bp · −
trnI-CAU · MN814852.1 · 13,812–13,885 bp · −
trnL-CAA · MN814852.1 · 21,336–21,416 bp · −
ndhB · MN814852.1 · 21,965–24,177 bp · −
rps7 · MN814852.1 · 24,453–24,920 bp · −
rps12 · MN814852.1 · 24,974–25,770 bp · −
rrn16 · MN814852.1 · 27,649–29,138 bp · −
trnN-GUU · MN814852.1 · 35,810–35,881 bp · −
ccsA · MN814852.1 · 50,031–51,002 bp · −
trnL-UAG · MN814852.1 · 51,096–51,175 bp · −
rpl32 · MN814852.1 · 51,576–51,752 bp · −
ycf1 · MN814852.1 · 54,420–55,598 bp · −
trnR-ACG · MN814852.1 · 56,571–56,644 bp · −
rrn5 · MN814852.1 · 56,897–57,017 bp · −
rrn4.5 · MN814852.1 · 57,247–57,349 bp · −
rrn23 · MN814852.1 · 57,451–60,266 bp · −
trnA-UGC · MN814852.1 · 60,428–61,304 bp · −
trnI-GAU · MN814852.1 · 61,364–62,383 bp · −
rrn16 · MN814852.1 · 62,683–64,172 bp · −
trnV-GAC · MN814852.1 · 64,402–64,473 bp · −
ycf2 · MN814852.1 · 71,092–77,847 bp · −
petD · MN814852.1 · 86,282–87,497 bp · −
petB · MN814852.1 · 87,691–89,026 bp · −
psbH · MN814852.1 · 89,143–89,364 bp · −
psbT · MN814852.1 · 89,667–89,768 bp · −
psbB · MN814852.1 · 89,944–91,470 bp · −
rps18 · MN814852.1 · 95,580–95,885 bp · −
rpl33 · MN814852.1 · 96,066–96,266 bp · −
psaJ · MN814852.1 · 96,739–96,873 bp · −
petG · MN814852.1 · 97,599–97,712 bp · −
petL · MN814852.1 · 97,882–97,977 bp · −
petA · MN814852.1 · 100,560–101,522 bp · −
cemA · MN814852.1 · 101,756–102,445 bp · −
ycf4 · MN814852.1 · 103,079–103,633 bp · −
psaI · MN814852.1 · 104,046–104,156 bp · −
accD · MN814852.1 · 104,610–106,145 bp · −
rbcL · MN814852.1 · 106,812–108,260 bp · −
trnM-CAU · MN814852.1 · 111,159–111,231 bp · −
trnP-GAA · MN814852.1 · 115,208–115,280 bp · −
trnL-UAA · MN814852.1 · 115,579–116,136 bp · −
trnS-GGA · MN814852.1 · 118,127–118,213 bp · −
trnG-GCC · MN814852.1 · 126,584–126,654 bp · −
psbZ · MN814852.1 · 126,921–127,109 bp · −
psbC · MN814852.1 · 127,782–129,203 bp · −
psbD · MN814852.1 · 129,151–130,212 bp · −
trnT-GGU · MN814852.1 · 131,593–131,664 bp · −
petN · MN814852.1 · 133,636–133,725 bp · −
trnC-GCA · MN814852.1 · 134,033–134,103 bp · −
atpA · MN814852.1 · 1–1,524 bp · +
trnS-GCU · MN814852.1 · 3,332–3,419 bp · +
trnQ-UUG · MN814852.1 · 4,550–4,621 bp · +
rps16 · MN814852.1 · 5,443–6,586 bp · +
trnK-UUU · MN814852.1 · 7,481–10,048 bp · +
matK · MN814852.1 · 8,220–9,782 bp · +
psbA · MN814852.1 · 10,281–11,339 bp · +
trnH-GUG · MN814852.1 · 11,664–11,737 bp · +
ycf2 · MN814852.1 · 13,974–20,729 bp · +
rps12 · MN814852.1 · 94,000–94,113 bp · +
trnV-GAC · MN814852.1 · 27,348–27,419 bp · +
trnI-GAU · MN814852.1 · 29,438–30,457 bp · +
trnA-UGC · MN814852.1 · 30,517–31,393 bp · +
rrn23 · MN814852.1 · 31,555–34,370 bp · +
rrn4.5 · MN814852.1 · 34,472–34,574 bp · +
rrn5 · MN814852.1 · 34,804–34,924 bp · +
trnR-ACG · MN814852.1 · 35,177–35,250 bp · +
ycf1 · MN814852.1 · 36,223–41,661 bp · +
rps15 · MN814852.1 · 42,037–42,309 bp · +
ndhH · MN814852.1 · 42,406–43,587 bp · +
ndhA · MN814852.1 · 43,589–45,661 bp · +
ndhI · MN814852.1 · 45,737–46,243 bp · +
ndhG · MN814852.1 · 46,581–47,111 bp · +
ndhE · MN814852.1 · 47,345–47,650 bp · +
psaC · MN814852.1 · 47,908–48,153 bp · +
ndhD · MN814852.1 · 48,273–49,775 bp · +
ndhF · MN814852.1 · 52,289–54,535 bp · +
trnN-GUU · MN814852.1 · 55,940–56,011 bp · +
rps12 · MN814852.1 · 66,051–66,847 bp · +
rps7 · MN814852.1 · 66,901–67,368 bp · +
ndhB · MN814852.1 · 67,644–69,856 bp · +
trnL-CAA · MN814852.1 · 70,405–70,485 bp · +
trnI-CAU · MN814852.1 · 77,936–78,009 bp · +
rpl23 · MN814852.1 · 78,175–78,456 bp · +
rpl2 · MN814852.1 · 78,475–79,967 bp · +
rps19 · MN814852.1 · 80,020–80,298 bp · +
rpl22 · MN814852.1 · 80,353–80,820 bp · +
rps3 · MN814852.1 · 80,805–81,455 bp · +
rpl16 · MN814852.1 · 81,612–82,850 bp · +
rpl14 · MN814852.1 · 82,978–83,346 bp · +
rps8 · MN814852.1 · 83,517–83,921 bp · +
infA · MN814852.1 · 84,052–84,285 bp · +
rpl36 · MN814852.1 · 84,381–84,494 bp · +
rps11 · MN814852.1 · 84,596–85,012 bp · +
rpoA · MN814852.1 · 85,083–86,096 bp · +
psbN · MN814852.1 · 89,470–89,601 bp · +
clpP · MN814852.1 · 91,929–93,874 bp · +
rpl20 · MN814852.1 · 94,947–95,333 bp · +
trnP-UGG · MN814852.1 · 97,165–97,238 bp · +
trnW-CCA · MN814852.1 · 97,400–97,473 bp · +
psbE · MN814852.1 · 98,867–99,118 bp · +
psbF · MN814852.1 · 99,133–99,252 bp · +
psbL · MN814852.1 · 99,276–99,392 bp · +
psbJ · MN814852.1 · 99,534–99,656 bp · +
atpB · MN814852.1 · 109,058–110,554 bp · +
atpE · MN814852.1 · 110,551–110,952 bp · +
trnV-UAC · MN814852.1 · 111,412–112,078 bp · +
ndhC · MN814852.1 · 112,910–113,272 bp · +
ndhK · MN814852.1 · 113,325–113,999 bp · +
ndhJ · MN814852.1 · 114,100–114,576 bp · +
trnT-UGU · MN814852.1 · 116,791–116,863 bp · +
rps4 · MN814852.1 · 117,212–117,817 bp · +
ycf3 · MN814852.1 · 118,635–120,558 bp · +
psaA · MN814852.1 · 121,280–123,532 bp · +
psaB · MN814852.1 · 123,558–125,762 bp · +
rps14 · MN814852.1 · 125,885–126,187 bp · +
trnM-CAU · MN814852.1 · 126,332–126,405 bp · +
trnS-UGA · MN814852.1 · 127,435–127,527 bp · +
trnE-UUC · MN814852.1 · 132,071–132,143 bp · +
trnY-GUA · MN814852.1 · 132,203–132,286 bp · +
trnD-GUC · MN814852.1 · 132,386–132,459 bp · +
psbM · MN814852.1 · 132,974–133,078 bp · +
rpoB · MN814852.1 · 135,269–138,481 bp · +
rpoC1 · MN814852.1 · 138,508–141,352 bp · +
rpoC2 · MN814852.1 · 141,525–145,667 bp · +
rps2 · MN814852.1 · 145,899–146,609 bp · +
atpI · MN814852.1 · 146,825–147,568 bp · +
atpH · MN814852.1 · 148,544–148,789 bp · +
atpF · MN814852.1 · 149,147–150,386 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Ajuga campylanthoides
ANNOTATED PLASTOME
MN814852.1
150,500 bp · 131 genes
Gene function
ATP synthase
Transfer RNA
Photosystem II
Ribosomal protein
Other
NADH dehydrogenase
Ribosomal RNA
Photosystem I
RNA polymerase
Cytochrome
0 37625 75250 112875 150500 bp
Forward strand 5′ → 3′
atpA trnS-GCU trnQ-UUG rps16 trnK-UUU matK psbA trnH-GUG ycf2 trnV-GAC trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rps15 ndhH ndhA ndhI ndhG ndhE psaC ndhD ndhF trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19 rpl22 rps3 rpl16 rpl14 rps8 infA rpl36 rps11 rpoA psbN clpP rps12 rpl20 trnP-UGG trnW-CCA psbE psbF psbL psbJ atpB atpE trnV-UAC ndhC ndhK ndhJ trnT-UGU rps4 ycf3 psaA psaB rps14 trnM-CAU trnS-UGA trnE-UUC trnY-GUA trnD-GUC psbM rpoB rpoC1 rpoC2 rps2 atpI atpH atpF
trnR-UCU trnG-UCC psbI psbK rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 rrn16 trnN-GUU ccsA trnL-UAG rpl32 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2 petD petB psbH psbT psbB rps18 rpl33 psaJ petG petL petA cemA ycf4 psaI accD rbcL trnM-CAU trnP-GAA trnL-UAA trnS-GGA trnG-GCC psbZ psbC psbD trnT-GGU petN trnC-GCA
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
atpA gene + 1 1524 1524 Locate
trnR-UCU gene − 1630 1701 72 Locate
trnG-UCC gene − 1886 2646 761 Locate
trnS-GCU gene + 3332 3419 88 Locate
psbI gene − 3534 3644 111 Locate
psbK gene − 4027 4212 186 Locate
trnQ-UUG gene + 4550 4621 72 Locate
rps16 gene + 5443 6586 1144 Locate
trnK-UUU gene + 7481 10048 2568 Locate
matK gene + 8220 9782 1563 Locate
psbA gene + 10281 11339 1059 Locate
trnH-GUG gene + 11664 11737 74 Locate
rpl2 gene − 11854 13346 1493 Locate
rpl23 gene − 13365 13646 282 Locate
trnI-CAU gene − 13812 13885 74 Locate
ycf2 gene + 13974 20729 6756 Locate
trnL-CAA gene − 21336 21416 81 Locate
ndhB gene − 21965 24177 2213 Locate
rps7 gene − 24453 24920 468 Locate
rps12 gene − 24974 25770 797 Locate
trnV-GAC gene + 27348 27419 72 Locate
rrn16 gene − 27649 29138 1490 Locate
trnI-GAU gene + 29438 30457 1020 Locate
trnA-UGC gene + 30517 31393 877 Locate
rrn23 gene + 31555 34370 2816 Locate
rrn4.5 gene + 34472 34574 103 Locate
rrn5 gene + 34804 34924 121 Locate
trnR-ACG gene + 35177 35250 74 Locate
trnN-GUU gene − 35810 35881 72 Locate
ycf1 gene + 36223 41661 5439 Locate
rps15 gene + 42037 42309 273 Locate
ndhH gene + 42406 43587 1182 Locate
ndhA gene + 43589 45661 2073 Locate
ndhI gene + 45737 46243 507 Locate
ndhG gene + 46581 47111 531 Locate
ndhE gene + 47345 47650 306 Locate
psaC gene + 47908 48153 246 Locate
ndhD gene + 48273 49775 1503 Locate
ccsA gene − 50031 51002 972 Locate
trnL-UAG gene − 51096 51175 80 Locate
rpl32 gene − 51576 51752 177 Locate
ndhF gene + 52289 54535 2247 Locate
ycf1 gene − 54420 55598 1179 Locate
trnN-GUU gene + 55940 56011 72 Locate
trnR-ACG gene − 56571 56644 74 Locate
rrn5 gene − 56897 57017 121 Locate
rrn4.5 gene − 57247 57349 103 Locate
rrn23 gene − 57451 60266 2816 Locate
trnA-UGC gene − 60428 61304 877 Locate
trnI-GAU gene − 61364 62383 1020 Locate
rrn16 gene − 62683 64172 1490 Locate
trnV-GAC gene − 64402 64473 72 Locate
rps12 gene + 66051 66847 797 Locate
rps7 gene + 66901 67368 468 Locate
ndhB gene + 67644 69856 2213 Locate
trnL-CAA gene + 70405 70485 81 Locate
ycf2 gene − 71092 77847 6756 Locate
trnI-CAU gene + 77936 78009 74 Locate
rpl23 gene + 78175 78456 282 Locate
rpl2 gene + 78475 79967 1493 Locate
rps19 gene + 80020 80298 279 Locate
rpl22 gene + 80353 80820 468 Locate
rps3 gene + 80805 81455 651 Locate
rpl16 gene + 81612 82850 1239 Locate
rpl14 gene + 82978 83346 369 Locate
rps8 gene + 83517 83921 405 Locate
infA gene + 84052 84285 234 Locate
rpl36 gene + 84381 84494 114 Locate
rps11 gene + 84596 85012 417 Locate
rpoA gene + 85083 86096 1014 Locate
petD gene − 86282 87497 1216 Locate
petB gene − 87691 89026 1336 Locate
psbH gene − 89143 89364 222 Locate
psbN gene + 89470 89601 132 Locate
psbT gene − 89667 89768 102 Locate
psbB gene − 89944 91470 1527 Locate
clpP gene + 91929 93874 1946 Locate
rps12 gene + 94000 94113 114 Locate
rpl20 gene + 94947 95333 387 Locate
rps18 gene − 95580 95885 306 Locate
rpl33 gene − 96066 96266 201 Locate
psaJ gene − 96739 96873 135 Locate
trnP-UGG gene + 97165 97238 74 Locate
trnW-CCA gene + 97400 97473 74 Locate
petG gene − 97599 97712 114 Locate
petL gene − 97882 97977 96 Locate
psbE gene + 98867 99118 252 Locate
psbF gene + 99133 99252 120 Locate
psbL gene + 99276 99392 117 Locate
psbJ gene + 99534 99656 123 Locate
petA gene − 100560 101522 963 Locate
cemA gene − 101756 102445 690 Locate
ycf4 gene − 103079 103633 555 Locate
psaI gene − 104046 104156 111 Locate
accD gene − 104610 106145 1536 Locate
rbcL gene − 106812 108260 1449 Locate
atpB gene + 109058 110554 1497 Locate
atpE gene + 110551 110952 402 Locate
trnM-CAU gene − 111159 111231 73 Locate
trnV-UAC gene + 111412 112078 667 Locate
ndhC gene + 112910 113272 363 Locate
ndhK gene + 113325 113999 675 Locate
ndhJ gene + 114100 114576 477 Locate
trnP-GAA gene − 115208 115280 73 Locate
trnL-UAA gene − 115579 116136 558 Locate
trnT-UGU gene + 116791 116863 73 Locate
rps4 gene + 117212 117817 606 Locate
trnS-GGA gene − 118127 118213 87 Locate
ycf3 gene + 118635 120558 1924 Locate
psaA gene + 121280 123532 2253 Locate
psaB gene + 123558 125762 2205 Locate
rps14 gene + 125885 126187 303 Locate
trnM-CAU gene + 126332 126405 74 Locate
trnG-GCC gene − 126584 126654 71 Locate
psbZ gene − 126921 127109 189 Locate
trnS-UGA gene + 127435 127527 93 Locate
psbC gene − 127782 129203 1422 Locate
psbD gene − 129151 130212 1062 Locate
trnT-GGU gene − 131593 131664 72 Locate
trnE-UUC gene + 132071 132143 73 Locate
trnY-GUA gene + 132203 132286 84 Locate
trnD-GUC gene + 132386 132459 74 Locate
psbM gene + 132974 133078 105 Locate
petN gene − 133636 133725 90 Locate
trnC-GCA gene − 134033 134103 71 Locate
rpoB gene + 135269 138481 3213 Locate
rpoC1 gene + 138508 141352 2845 Locate
rpoC2 gene + 141525 145667 4143 Locate
rps2 gene + 145899 146609 711 Locate
atpI gene + 146825 147568 744 Locate
atpH gene + 148544 148789 246 Locate
atpF gene + 149147 150386 1240 Locate
Status Available
Accession MN814852.1
Length 150,500 bp
GC content 38.3%
Annotated genes 131
Gene sequence records 8
Atp Synthase 6 Translation Rna 37 Photosystem Ii 15 Ribosomal Protein 26 Other 13 Nad Dehydrogenase 12 Ribosomal Rna 8 Photosystem I 5 Rna Polymerase 4 Cytochrome 6
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources