Coordinate-aware organelle record

Ajuga ciliata chloroplast genome

Available MN814853.1 150,494 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
atpA	gene	atp-synthase	+	0	1524	1524
trnR-UCU	gene	translation-rna	−	1629	1701	72
trnG-UCC	gene	translation-rna	−	1886	2647	761
trnS-GCU	gene	translation-rna	+	3323	3411	88
psbI	gene	photosystem-ii	−	3524	3635	111
psbK	gene	photosystem-ii	−	4046	4232	186
trnQ-UUG	gene	translation-rna	+	4561	4633	72
rps16	gene	ribosomal-protein	+	5453	6585	1132
trnK-UUU	gene	translation-rna	+	7485	10054	2569
matK	gene	other	+	8225	9788	1563
psbA	gene	photosystem-ii	+	10286	11345	1059
trnH-GUG	gene	translation-rna	+	11669	11743	74
rpl2	gene	ribosomal-protein	−	11859	13348	1489
rpl23	gene	ribosomal-protein	−	13366	13648	282
trnI-CAU	gene	translation-rna	−	13813	13887	74
ycf2	gene	other	+	13975	20740	6765
trnL-CAA	gene	translation-rna	−	21346	21427	81
ndhB	gene	nad-dehydrogenase	−	21975	24188	2213
rps7	gene	ribosomal-protein	−	24463	24931	468
rps12	gene	ribosomal-protein	+	24984	94088	69104
trnV-GAC	gene	translation-rna	+	27358	27430	72
rrn16	gene	ribosomal-rna	−	27658	29148	1490
trnI-GAU	gene	translation-rna	+	29447	30468	1021
trnA-UGC	gene	translation-rna	+	30527	31404	877
rrn23	gene	ribosomal-rna	+	31565	34381	2816
rrn4.5	gene	ribosomal-rna	+	34482	34585	103
rrn5	gene	ribosomal-rna	+	34814	34935	121
trnR-ACG	gene	translation-rna	+	35187	35261	74
trnN-GUU	gene	translation-rna	−	35820	35892	72
ycf1	gene	other	+	36233	41672	5439
rps15	gene	ribosomal-protein	+	42047	42320	273
ndhH	gene	nad-dehydrogenase	+	42416	43598	1182
ndhA	gene	nad-dehydrogenase	+	43599	45672	2073
ndhI	gene	nad-dehydrogenase	+	45747	46254	507
ndhG	gene	nad-dehydrogenase	+	46591	47122	531
ndhE	gene	nad-dehydrogenase	+	47355	47661	306
psaC	gene	photosystem-i	+	47918	48164	246
ndhD	gene	nad-dehydrogenase	+	48283	49786	1503
ccsA	gene	other	−	50041	51013	972
trnL-UAG	gene	translation-rna	−	51106	51186	80
rpl32	gene	ribosomal-protein	−	51586	51763	177
ndhF	gene	nad-dehydrogenase	+	52299	54540	2241
ycf1	gene	other	−	54430	55585	1155
trnN-GUU	gene	translation-rna	+	55926	55998	72
trnR-ACG	gene	translation-rna	−	56557	56631	74
rrn5	gene	ribosomal-rna	−	56883	57004	121
rrn4.5	gene	ribosomal-rna	−	57233	57336	103
rrn23	gene	ribosomal-rna	−	57437	60253	2816
trnA-UGC	gene	translation-rna	−	60414	61291	877
trnI-GAU	gene	translation-rna	−	61350	62371	1021
rrn16	gene	ribosomal-rna	−	62670	64160	1490
trnV-GAC	gene	translation-rna	−	64388	64460	72
rps12	gene	ribosomal-protein	+	66037	94088	28051
rps7	gene	ribosomal-protein	+	66887	67355	468
ndhB	gene	nad-dehydrogenase	+	67630	69843	2213
trnL-CAA	gene	translation-rna	+	70391	70472	81
ycf2	gene	other	−	71078	77843	6765
trnI-CAU	gene	translation-rna	+	77931	78005	74
rpl23	gene	ribosomal-protein	+	78170	78452	282
rpl2	gene	ribosomal-protein	+	78470	79959	1489
rps19	gene	ribosomal-protein	+	80011	80290	279
rpl22	gene	ribosomal-protein	+	80344	80812	468
rps3	gene	ribosomal-protein	+	80796	81447	651
rpl16	gene	ribosomal-protein	+	81603	82835	1232
rpl14	gene	ribosomal-protein	+	82963	83332	369
rps8	gene	ribosomal-protein	+	83499	83904	405
infA	gene	other	+	84034	84268	234
rpl36	gene	ribosomal-protein	+	84363	84477	114
rps11	gene	ribosomal-protein	+	84578	84995	417
rpoA	gene	rna-polymerase	+	85065	86079	1014
petD	gene	cytochrome	−	86264	87479	1215
petB	gene	cytochrome	−	87672	89005	1333
psbH	gene	photosystem-ii	−	89121	89343	222
psbN	gene	photosystem-ii	+	89448	89580	132
psbT	gene	photosystem-ii	−	89645	89747	102
psbB	gene	photosystem-ii	−	89922	91449	1527
clpP	gene	other	+	91905	93849	1944
rpl20	gene	ribosomal-protein	+	94921	95308	387
rps18	gene	ribosomal-protein	−	95554	95860	306
rpl33	gene	ribosomal-protein	−	96040	96241	201
psaJ	gene	photosystem-i	−	96713	96848	135
trnP-UGG	gene	translation-rna	+	97151	97225	74
trnW-CCA	gene	translation-rna	+	97386	97460	74
petG	gene	cytochrome	−	97583	97697	114
petL	gene	cytochrome	−	97876	97972	96
psbE	gene	photosystem-ii	+	98861	99113	252
psbF	gene	photosystem-ii	+	99127	99247	120
psbL	gene	photosystem-ii	+	99270	99387	117
psbJ	gene	photosystem-ii	+	99528	99651	123
petA	gene	cytochrome	−	100554	101517	963
cemA	gene	other	−	101732	102422	690
ycf4	gene	other	−	103074	103629	555
psaI	gene	photosystem-i	−	104041	104152	111
accD	gene	other	−	104606	106142	1536
rbcL	gene	other	−	106811	108260	1449
atpB	gene	atp-synthase	+	109060	110557	1497
atpE	gene	atp-synthase	+	110553	110955	402
trnM-CAU	gene	translation-rna	−	111154	111227	73
trnV-UAC	gene	translation-rna	+	111407	112076	669
ndhC	gene	nad-dehydrogenase	+	112903	113266	363
ndhK	gene	nad-dehydrogenase	+	113318	113993	675
ndhJ	gene	nad-dehydrogenase	+	114093	114570	477
trnP-GAA	gene	translation-rna	−	115209	115282	73
trnL-UAA	gene	translation-rna	−	115601	116169	568
trnT-UGU	gene	translation-rna	+	116823	116896	73
rps4	gene	ribosomal-protein	+	117239	117845	606
trnS-GGA	gene	translation-rna	−	118154	118241	87
ycf3	gene	other	+	118661	120585	1924
psaA	gene	photosystem-i	+	121306	123559	2253
psaB	gene	photosystem-i	+	123584	125789	2205
rps14	gene	ribosomal-protein	+	125911	126214	303
trnM-CAU	gene	translation-rna	+	126358	126432	74
trnG-GCC	gene	translation-rna	−	126610	126681	71
psbZ	gene	photosystem-ii	−	126948	127137	189
trnS-UGA	gene	translation-rna	+	127462	127555	93
psbC	gene	photosystem-ii	−	127809	129231	1422
psbD	gene	photosystem-ii	−	129178	130240	1062
trnT-GGU	gene	translation-rna	−	131620	131692	72
trnE-UUC	gene	translation-rna	+	132098	132171	73
trnY-GUA	gene	translation-rna	+	132231	132315	84
trnD-GUC	gene	translation-rna	+	132414	132488	74
psbM	gene	photosystem-ii	+	133002	133107	105
petN	gene	cytochrome	−	133654	133744	90
trnC-GCA	gene	translation-rna	−	134046	134117	71
rpoB	gene	rna-polymerase	+	135271	138484	3213
rpoC1	gene	rna-polymerase	+	138510	141356	2846
rpoC2	gene	rna-polymerase	+	141528	145635	4107
rps2	gene	ribosomal-protein	+	145897	146608	711
atpI	gene	atp-synthase	+	146823	147567	744
atpH	gene	atp-synthase	+	148534	148780	246
atpF	gene	atp-synthase	+	149120	150360	1240

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN814853.1DNA · accDMN814853DNA · atpBMN814853DNA · matKMN814853DNA · ndhFMN814853DNA · psbAMN814853DNA · rbcLMN814853DNA · rps12MN814853DNA · ycf1MN814853