Coordinate-aware organelle record

Ajuga decumbens chloroplast genome

Available MN814854.1 150,325 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
atpA	gene	atp-synthase	+	0	1524	1524
trnR-UCU	gene	translation-rna	−	1629	1701	72
trnG-UCC	gene	translation-rna	−	1886	2647	761
trnS-GCU	gene	translation-rna	+	3323	3411	88
psbI	gene	photosystem-ii	−	3524	3635	111
psbK	gene	photosystem-ii	−	4016	4202	186
trnQ-UUG	gene	translation-rna	+	4539	4611	72
rps16	gene	ribosomal-protein	+	5432	6574	1142
trnK-UUU	gene	translation-rna	+	7479	10050	2571
matK	gene	other	+	8221	9784	1563
psbA	gene	photosystem-ii	+	10275	11334	1059
trnH-GUG	gene	translation-rna	+	11658	11732	74
rpl2	gene	ribosomal-protein	−	11848	13337	1489
rpl23	gene	ribosomal-protein	−	13355	13637	282
trnI-CAU	gene	translation-rna	−	13802	13876	74
ycf2	gene	other	+	13964	20711	6747
trnL-CAA	gene	translation-rna	−	21317	21398	81
ndhB	gene	nad-dehydrogenase	−	21946	24159	2213
rps7	gene	ribosomal-protein	−	24434	24902	468
rps12	gene	ribosomal-protein	+	24955	93881	68926
trnV-GAC	gene	translation-rna	+	27329	27401	72
rrn16	gene	ribosomal-rna	−	27629	29119	1490
trnI-GAU	gene	translation-rna	+	29418	30438	1020
trnA-UGC	gene	translation-rna	+	30497	31374	877
rrn23	gene	ribosomal-rna	+	31535	34351	2816
rrn4.5	gene	ribosomal-rna	+	34452	34555	103
rrn5	gene	ribosomal-rna	+	34784	34905	121
trnR-ACG	gene	translation-rna	+	35149	35223	74
trnN-GUU	gene	translation-rna	−	35782	35854	72
ycf1	gene	other	+	36195	37266	1071
ndhF	gene	nad-dehydrogenase	−	37199	39473	2274
rpl32	gene	ribosomal-protein	+	40009	40186	177
trnL-UAG	gene	translation-rna	+	40585	40665	80
ccsA	gene	other	+	40758	41730	972
ndhD	gene	nad-dehydrogenase	−	41984	43487	1503
psaC	gene	photosystem-i	−	43606	43852	246
ndhE	gene	nad-dehydrogenase	−	44109	44415	306
ndhG	gene	nad-dehydrogenase	−	44648	45179	531
ndhI	gene	nad-dehydrogenase	−	45516	46023	507
ndhA	gene	nad-dehydrogenase	−	46098	48176	2078
ndhH	gene	nad-dehydrogenase	−	48177	49359	1182
rps15	gene	ribosomal-protein	−	49455	49728	273
ycf1	gene	other	−	50103	55398	5295
trnN-GUU	gene	translation-rna	+	55739	55811	72
trnR-ACG	gene	translation-rna	−	56370	56444	74
rrn5	gene	ribosomal-rna	−	56688	56809	121
rrn4.5	gene	ribosomal-rna	−	57038	57141	103
rrn23	gene	ribosomal-rna	−	57242	60058	2816
trnA-UGC	gene	translation-rna	−	60219	61096	877
trnI-GAU	gene	translation-rna	−	61155	62175	1020
rrn16	gene	ribosomal-rna	−	62474	63964	1490
trnV-GAC	gene	translation-rna	−	64192	64264	72
rps12	gene	ribosomal-protein	+	65841	93881	28040
rps7	gene	ribosomal-protein	+	66691	67159	468
ndhB	gene	nad-dehydrogenase	+	67434	69647	2213
trnL-CAA	gene	translation-rna	+	70195	70276	81
ycf2	gene	other	−	70882	77629	6747
trnI-CAU	gene	translation-rna	+	77717	77791	74
rpl23	gene	ribosomal-protein	+	77956	78238	282
rpl2	gene	ribosomal-protein	+	78256	79745	1489
rps19	gene	ribosomal-protein	+	79797	80076	279
rpl22	gene	ribosomal-protein	+	80130	80598	468
rps3	gene	ribosomal-protein	+	80582	81233	651
rpl16	gene	ribosomal-protein	+	81389	82625	1236
rpl14	gene	ribosomal-protein	+	82752	83121	369
rps8	gene	ribosomal-protein	+	83289	83694	405
infA	gene	other	+	83824	84058	234
rpl36	gene	ribosomal-protein	+	84153	84267	114
rps11	gene	ribosomal-protein	+	84368	84785	417
rpoA	gene	rna-polymerase	+	84855	85869	1014
petD	gene	cytochrome	−	86054	87269	1215
petB	gene	cytochrome	−	87462	88797	1335
psbH	gene	photosystem-ii	−	88913	89135	222
psbN	gene	photosystem-ii	+	89240	89372	132
psbT	gene	photosystem-ii	−	89437	89539	102
psbB	gene	photosystem-ii	−	89714	91241	1527
clpP	gene	other	+	91698	93642	1944
rpl20	gene	ribosomal-protein	+	94714	95101	387
rps18	gene	ribosomal-protein	−	95347	95653	306
rpl33	gene	ribosomal-protein	−	95833	96034	201
psaJ	gene	photosystem-i	−	96506	96641	135
trnP-UGG	gene	translation-rna	+	96932	97006	74
trnW-CCA	gene	translation-rna	+	97167	97241	74
petG	gene	cytochrome	−	97362	97476	114
petL	gene	cytochrome	−	97645	97741	96
psbE	gene	photosystem-ii	+	98630	98882	252
psbF	gene	photosystem-ii	+	98896	99016	120
psbL	gene	photosystem-ii	+	99039	99156	117
psbJ	gene	photosystem-ii	+	99297	99420	123
petA	gene	cytochrome	−	100313	101276	963
cemA	gene	other	−	101509	102199	690
ycf4	gene	other	−	102851	103406	555
psaI	gene	photosystem-i	−	103821	103932	111
accD	gene	other	−	104386	105922	1536
rbcL	gene	other	−	106595	108044	1449
atpB	gene	atp-synthase	+	108845	110342	1497
atpE	gene	atp-synthase	+	110338	110740	402
trnM-CAU	gene	translation-rna	−	110939	111012	73
trnV-UAC	gene	translation-rna	+	111192	111861	669
ndhC	gene	nad-dehydrogenase	+	112694	113057	363
ndhK	gene	nad-dehydrogenase	+	113109	113784	675
ndhJ	gene	nad-dehydrogenase	+	113884	114361	477
trnP-GAA	gene	translation-rna	−	115000	115073	73
trnL-UAA	gene	translation-rna	−	115371	115937	566
trnT-UGU	gene	translation-rna	+	116591	116664	73
rps4	gene	ribosomal-protein	+	117008	117614	606
trnS-GGA	gene	translation-rna	−	117923	118010	87
ycf3	gene	other	+	118430	120355	1925
psaA	gene	photosystem-i	+	121129	123382	2253
psaB	gene	photosystem-i	+	123407	125612	2205
rps14	gene	ribosomal-protein	+	125734	126037	303
trnM-CAU	gene	translation-rna	+	126181	126255	74
trnG-GCC	gene	translation-rna	−	126433	126504	71
psbZ	gene	photosystem-ii	−	126771	126960	189
trnS-UGA	gene	translation-rna	+	127285	127378	93
psbC	gene	photosystem-ii	−	127632	129054	1422
psbD	gene	photosystem-ii	−	129001	130063	1062
trnT-GGU	gene	translation-rna	−	131443	131515	72
trnE-UUC	gene	translation-rna	+	131921	131994	73
trnY-GUA	gene	translation-rna	+	132053	132137	84
trnD-GUC	gene	translation-rna	+	132236	132310	74
psbM	gene	photosystem-ii	+	132824	132929	105
petN	gene	cytochrome	−	133490	133580	90
trnC-GCA	gene	translation-rna	−	133887	133958	71
rpoB	gene	rna-polymerase	+	135123	138336	3213
rpoC1	gene	rna-polymerase	+	138362	141208	2846
rpoC2	gene	rna-polymerase	+	141380	145454	4074
rps2	gene	ribosomal-protein	+	145754	146465	711
atpI	gene	atp-synthase	+	146680	147424	744
atpH	gene	atp-synthase	+	148390	148636	246
atpF	gene	atp-synthase	+	148975	150215	1240

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN814854.1DNA · accDMN814854DNA · atpBMN814854DNA · matKMN814854DNA · ndhFMN814854DNA · psbAMN814854DNA · rbcLMN814854DNA · rps12MN814854DNA · ycf1MN814854