Coordinate-aware organelle record

Ajuga genevensis chloroplast genome

Available PP024532.1 149,753 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	77	75
psbA	gene	photosystem-ii	−	400	1459	1059
trnK-UUU	gene	translation-rna	−	1690	4257	2567
matK	gene	other	−	1957	3520	1563
rps16	gene	ribosomal-protein	−	5128	6284	1156
trnQ-UUG	gene	translation-rna	−	6712	6784	72
psbK	gene	photosystem-ii	+	7113	7299	186
psbI	gene	photosystem-ii	+	7681	7792	111
trnS-GCU	gene	translation-rna	−	7909	7997	88
trnG-UCC	gene	translation-rna	+	8678	9439	761
trnR-UCU	gene	translation-rna	+	9627	9699	72
atpA	gene	atp-synthase	−	9804	11328	1524
atpF	gene	atp-synthase	−	11405	12645	1240
atpH	gene	atp-synthase	−	13000	13246	246
atpI	gene	atp-synthase	−	14202	14946	744
rps2	gene	ribosomal-protein	−	15142	15853	711
rpoC2	gene	rna-polymerase	−	16145	20213	4068
rpoC1	gene	rna-polymerase	−	20385	23230	2845
rpoB	gene	rna-polymerase	−	23256	26469	3213
trnC-GCA	gene	translation-rna	+	27609	27680	71
petN	gene	cytochrome	+	27987	28077	90
psbM	gene	photosystem-ii	−	28632	28737	105
trnD-GUC	gene	translation-rna	−	29236	29313	77
trnY-GUA	gene	translation-rna	−	29410	29496	86
trnE-UUC	gene	translation-rna	−	29554	29627	73
trnT-GGU	gene	translation-rna	+	30068	30142	74
psbD	gene	photosystem-ii	+	31521	32583	1062
psbC	gene	photosystem-ii	+	32530	33952	1422
trnS-UGA	gene	translation-rna	−	34206	34299	93
psbZ	gene	photosystem-ii	+	34624	34813	189
trnG-GCC	gene	translation-rna	+	35079	35151	72
trnM-CAU	gene	translation-rna	−	35321	35396	75
rps14	gene	ribosomal-protein	−	35540	35843	303
psaB	gene	photosystem-i	−	35964	38169	2205
psaA	gene	photosystem-i	−	38194	40447	2253
ycf3	gene	other	−	41145	43067	1922
trnS-GGA	gene	translation-rna	+	43478	43566	88
rps4	gene	ribosomal-protein	−	43874	44480	606
trnT-UGU	gene	translation-rna	−	44819	44894	75
trnL-UAA	gene	translation-rna	+	45546	46113	567
trnF-GAA	gene	translation-rna	+	46410	46484	74
ndhJ	gene	nad-dehydrogenase	−	47135	47612	477
ndhK	gene	nad-dehydrogenase	−	47712	48396	684
ndhC	gene	nad-dehydrogenase	−	48448	48811	363
trnV-UAC	gene	translation-rna	−	49604	50269	665
trnM-CAU	gene	translation-rna	+	50449	50522	73
atpE	gene	atp-synthase	−	50721	51123	402
atpB	gene	atp-synthase	−	51119	52616	1497
rbcL	gene	other	+	53394	54864	1470
accD	gene	other	+	55586	57062	1476
psaI	gene	photosystem-i	+	57515	57626	111
ycf4	gene	other	+	58041	58596	555
cemA	gene	other	+	59246	59936	690
petA	gene	cytochrome	+	60151	61114	963
psbJ	gene	photosystem-ii	−	62016	62139	123
psbL	gene	photosystem-ii	−	62272	62389	117
psbF	gene	photosystem-ii	−	62412	62532	120
psbE	gene	photosystem-ii	−	62546	62798	252
petL	gene	cytochrome	+	63683	63779	96
petG	gene	cytochrome	+	63947	64061	114
trnW-CCA	gene	translation-rna	−	64181	64255	74
trnP-UGG	gene	translation-rna	−	64414	64490	76
psaJ	gene	photosystem-i	+	64789	64924	135
rpl33	gene	ribosomal-protein	+	65397	65598	201
rps18	gene	ribosomal-protein	+	65778	66084	306
rpl20	gene	ribosomal-protein	−	66329	66716	387
rps12	gene	ribosomal-protein	−	67550	95573	28023
rps12	gene	ribosomal-protein	+	67550	136533	68983
clpP1	gene	other	−	67789	69729	1940
psbB	gene	photosystem-ii	+	70179	71706	1527
psbT	gene	photosystem-ii	+	71880	71982	102
psbN	gene	photosystem-ii	−	72047	72179	132
psbH	gene	photosystem-ii	+	72284	72506	222
petB	gene	cytochrome	+	72622	73959	1337
petD	gene	cytochrome	+	74152	75367	1215
rpoA	gene	rna-polymerase	−	75552	76566	1014
rps11	gene	ribosomal-protein	−	76636	77053	417
rpl36	gene	ribosomal-protein	−	77154	77268	114
infA	gene	other	−	77363	77597	234
rps8	gene	ribosomal-protein	−	77727	78132	405
rpl14	gene	ribosomal-protein	−	78286	78655	369
rpl16	gene	ribosomal-protein	−	78782	80018	1236
rps3	gene	ribosomal-protein	−	80181	80832	651
rpl22	gene	ribosomal-protein	−	80816	81284	468
rps19	gene	ribosomal-protein	−	81338	81617	279
rpl2	gene	ribosomal-protein	−	81669	83158	1489
rpl23	gene	ribosomal-protein	−	83176	83458	282
trnM-CAU	gene	translation-rna	−	83622	83697	75
ycf2	gene	other	+	83785	90532	6747
ycf15	gene	other	+	90673	90871	198
trnL-CAA	gene	translation-rna	−	91137	91220	83
ndhB	gene	nad-dehydrogenase	−	91767	93980	2213
rps7	gene	ribosomal-protein	−	94255	94723	468
trnV-GAC	gene	translation-rna	+	97150	97222	72
rrn16	gene	ribosomal-rna	+	97452	98943	1491
trnE-UUC	gene	translation-rna	+	99241	100261	1020
trnA-UGC	gene	translation-rna	+	100320	101197	877
rrn23	gene	ribosomal-rna	+	101358	104177	2819
rrn4.5	gene	ribosomal-rna	+	104275	104378	103
rrn5	gene	ribosomal-rna	+	104607	104728	121
trnR-ACG	gene	translation-rna	+	104972	105047	75
trnN-GUU	gene	translation-rna	−	105604	105678	74
ycf1	gene	other	+	106018	107173	1155
ndhF	gene	nad-dehydrogenase	−	107063	109304	2241
rpl32	gene	ribosomal-protein	+	109829	110006	177
trnL-UAG	gene	translation-rna	+	110409	110489	80
ccsA	gene	other	+	110583	111555	972
ndhD	gene	nad-dehydrogenase	−	111771	113274	1503
psaC	gene	photosystem-i	−	113393	113639	246
ndhE	gene	nad-dehydrogenase	−	113889	114195	306
ndhG	gene	nad-dehydrogenase	−	114423	114954	531
ndhI	gene	nad-dehydrogenase	−	115307	115814	507
ndhA	gene	nad-dehydrogenase	−	115889	117958	2069
ndhH	gene	nad-dehydrogenase	−	117959	119195	1236
rps15	gene	ribosomal-protein	−	119237	119510	273
ycf1	gene	other	−	119885	125414	5529
trnN-GUU	gene	translation-rna	+	125631	125705	74
trnR-ACG	gene	translation-rna	−	126262	126337	75
rrn5	gene	ribosomal-rna	−	126581	126702	121
rrn4.5	gene	ribosomal-rna	−	126931	127034	103
rrn23	gene	ribosomal-rna	−	127132	129951	2819
trnA-UGC	gene	translation-rna	−	130112	130988	876
trnE-UUC	gene	translation-rna	−	131048	132068	1020
rrn16	gene	ribosomal-rna	−	132366	133857	1491
trnV-GAC	gene	translation-rna	−	134087	134159	72
rps7	gene	ribosomal-protein	+	136586	137054	468
ndhB	gene	nad-dehydrogenase	+	137329	139542	2213
trnL-CAA	gene	translation-rna	+	140089	140172	83
ycf15	gene	other	−	140438	140636	198
ycf2	gene	other	−	140777	147524	6747
trnM-CAU	gene	translation-rna	+	147612	147687	75
rpl23	gene	ribosomal-protein	+	147851	148133	282
rpl2	gene	ribosomal-protein	+	148151	149640	1489
rps19	gene	ribosomal-protein	+	149692	149753	61

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP024532.1DNA · accDPP024532DNA · atpBPP024532DNA · matKPP024532DNA · ndhFPP024532DNA · psbAPP024532DNA · rbcLPP024532DNA · rps12PP024532DNA · ycf1PP024532