Coordinate-aware organelle record

Ajuga multiflora chloroplast genome

Available PQ178989.1 149,745 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	4	78	74
psbA	gene	photosystem-ii	−	405	1464	1059
trnK-UUU	gene	translation-rna	−	1696	4269	2573
matK	gene	other	−	1968	3531	1563
rps16	gene	ribosomal-protein	−	5150	6293	1143
trnQ-UUG	gene	translation-rna	−	7063	7135	72
psbK	gene	photosystem-ii	+	7464	7650	186
psbI	gene	photosystem-ii	+	8033	8144	111
trnS-GCU	gene	translation-rna	−	8261	8349	88
trnG-UCC	gene	translation-rna	+	9027	9793	766
trnR-UCU	gene	translation-rna	+	9979	10051	72
atpA	gene	atp-synthase	−	10156	11680	1524
atpF	gene	atp-synthase	−	11767	13007	1240
atpH	gene	atp-synthase	−	13362	13608	246
atpI	gene	atp-synthase	−	14569	15313	744
rps2	gene	ribosomal-protein	−	15509	16220	711
rpoC2	gene	rna-polymerase	−	16536	20595	4059
rpoC1	gene	rna-polymerase	−	20755	23610	2855
rpoB	gene	rna-polymerase	−	23636	26849	3213
trnC-GCA	gene	translation-rna	+	27996	28067	71
petN	gene	cytochrome	+	28375	28465	90
psbM	gene	photosystem-ii	−	29021	29126	105
trnD-GUC	gene	translation-rna	−	29640	29714	74
trnY-GUA	gene	translation-rna	−	29813	29897	84
trnE-UUC	gene	translation-rna	−	29956	30029	73
trnT-GGU	gene	translation-rna	+	30435	30507	72
psbD	gene	photosystem-ii	+	31895	32957	1062
psbC	gene	photosystem-ii	+	32904	34326	1422
trnS-UGA	gene	translation-rna	−	34580	34673	93
psbZ	gene	photosystem-ii	+	34998	35187	189
trnG-GCC	gene	translation-rna	+	35453	35524	71
trnfM-CAU	gene	translation-rna	−	35694	35768	74
rps14	gene	ribosomal-protein	−	35912	36215	303
psaB	gene	photosystem-i	−	36337	38542	2205
psaA	gene	photosystem-i	−	38567	40820	2253
ycf3	gene	other	−	41537	43461	1924
trnS-GGA	gene	translation-rna	+	43886	43973	87
rps4	gene	ribosomal-protein	−	44282	44888	606
trnT-UGU	gene	translation-rna	−	45230	45303	73
trnL-UAA	gene	translation-rna	+	45964	46530	566
trnF-GAA	gene	translation-rna	+	46828	46901	73
ndhJ	gene	nad-dehydrogenase	−	47557	48034	477
ndhK	gene	nad-dehydrogenase	−	48134	48818	684
ndhC	gene	nad-dehydrogenase	−	48870	49233	363
trnV-UAC	gene	translation-rna	−	49527	50193	666
trnM-CAU	gene	translation-rna	+	50373	50446	73
atpE	gene	atp-synthase	−	50645	51047	402
atpB	gene	atp-synthase	−	51043	52540	1497
rbcL	gene	other	+	53339	54782	1443
accD	gene	other	+	55457	56993	1536
psaI	gene	photosystem-i	+	57457	57568	111
ycf4	gene	other	+	57979	58534	555
cemA	gene	other	+	59324	60014	690
petA	gene	cytochrome	+	60229	61192	963
psbJ	gene	photosystem-ii	−	62102	62225	123
psbL	gene	photosystem-ii	−	62366	62483	117
psbF	gene	photosystem-ii	−	62506	62626	120
psbE	gene	photosystem-ii	−	62640	62892	252
petL	gene	cytochrome	+	63735	63831	96
petG	gene	cytochrome	+	64000	64114	114
trnW-CCA	gene	translation-rna	−	64239	64313	74
trnP-UGG	gene	translation-rna	−	64474	64548	74
psaJ	gene	photosystem-i	+	64851	64986	135
rpl33	gene	ribosomal-protein	+	65453	65654	201
rps18	gene	ribosomal-protein	+	65819	66125	306
rpl20	gene	ribosomal-protein	−	66372	66759	387
rps12	gene	ribosomal-protein	−	67592	95568	27976
rps12	gene	ribosomal-protein	+	67592	136526	68934
clpP	gene	other	−	67831	69772	1941
psbB	gene	photosystem-ii	+	70192	71719	1527
psbT	gene	photosystem-ii	+	71894	71996	102
psbN	gene	photosystem-ii	−	72061	72193	132
psbH	gene	photosystem-ii	+	72298	72520	222
petB	gene	cytochrome	+	72639	73975	1336
petD	gene	cytochrome	+	74168	75382	1214
rpoA	gene	rna-polymerase	−	75567	76581	1014
rps11	gene	ribosomal-protein	−	76652	77069	417
rpl36	gene	ribosomal-protein	−	77170	77284	114
infA	gene	other	−	77379	77613	234
rps8	gene	ribosomal-protein	−	77743	78148	405
rpl14	gene	ribosomal-protein	−	78298	78667	369
rpl16	gene	ribosomal-protein	−	78786	80020	1234
rps3	gene	ribosomal-protein	−	80176	80827	651
rpl22	gene	ribosomal-protein	−	80811	81279	468
rps19	gene	ribosomal-protein	−	81333	81612	279
rpl2	gene	ribosomal-protein	−	81664	83153	1489
rpl23	gene	ribosomal-protein	−	83171	83453	282
trnI-CAU	gene	translation-rna	−	83618	83692	74
ycf2	gene	other	+	83780	90527	6747
trnL-CAA	gene	translation-rna	−	91133	91214	81
ndhB	gene	nad-dehydrogenase	−	91762	93975	2213
rps7	gene	ribosomal-protein	−	94250	94718	468
trnV-GAC	gene	translation-rna	+	97164	97236	72
rrn16	gene	ribosomal-rna	−	97465	98955	1490
trnI-GAU	gene	translation-rna	+	99254	100274	1020
trnA-UGC	gene	translation-rna	+	100333	101210	877
rrn23	gene	ribosomal-rna	+	101371	104289	2918
rrn4.5	gene	ribosomal-rna	+	104288	104391	103
rrn5	gene	ribosomal-rna	+	104620	104741	121
trnR-ACG	gene	translation-rna	+	104985	105059	74
trnN-GUU	gene	translation-rna	−	105618	105690	72
ycf1	gene	other	+	106031	107186	1155
ndhF	gene	nad-dehydrogenase	−	107076	109317	2241
rpl32	gene	ribosomal-protein	+	109842	110019	177
trnL-UAG	gene	translation-rna	+	110419	110499	80
ccsA	gene	other	+	110596	111568	972
ndhD	gene	nad-dehydrogenase	−	111770	113273	1503
psaC	gene	photosystem-i	−	113392	113638	246
ndhE	gene	nad-dehydrogenase	−	113888	114194	306
ndhG	gene	nad-dehydrogenase	−	114412	114943	531
ndhI	gene	nad-dehydrogenase	−	115278	115785	507
ndhA	gene	nad-dehydrogenase	−	115860	117938	2078
ndhH	gene	nad-dehydrogenase	−	117939	119121	1182
rps15	gene	ribosomal-protein	−	119217	119490	273
ycf1	gene	other	−	119866	125266	5400
trnN-GUU	gene	translation-rna	+	125607	125679	72
trnR-ACG	gene	translation-rna	−	126238	126312	74
rrn5	gene	ribosomal-rna	−	126556	126677	121
rrn4.5	gene	ribosomal-rna	−	126906	127009	103
rrn23	gene	ribosomal-rna	−	127008	129926	2918
trnA-UGC	gene	translation-rna	−	130087	130964	877
trnI-GAU	gene	translation-rna	−	131023	132043	1020
rrn16	gene	ribosomal-rna	+	132342	133832	1490
trnV-GAC	gene	translation-rna	−	134061	134133	72
rps7	gene	ribosomal-protein	+	136579	137047	468
ndhB	gene	nad-dehydrogenase	+	137322	139535	2213
trnL-CAA	gene	translation-rna	+	140083	140164	81
ycf2	gene	other	−	140770	147517	6747
trnI-CAU	gene	translation-rna	+	147605	147679	74
rpl23	gene	ribosomal-protein	+	147844	148126	282
rpl2	gene	ribosomal-protein	+	148144	149633	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ178989.1DNA · accDPQ178989DNA · atpBPQ178989DNA · matKPQ178989DNA · ndhFPQ178989DNA · psbAPQ178989DNA · rbcLPQ178989DNA · rps12PQ178989DNA · ycf1PQ178989