Coordinate-aware organelle record

Ajuga nubigena chloroplast genome

Available NC_071844.1 150,490 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	401	1460	1059
trnK-UUU	gene	translation-rna	−	1692	4261	2569
matK	gene	other	−	1994	3521	1527
rps16	gene	ribosomal-protein	−	5154	6297	1143
trnQ-UUG	gene	translation-rna	−	7127	7199	72
psbK	gene	photosystem-ii	+	7558	7744	186
psbI	gene	photosystem-ii	+	8125	8236	111
trnS-GCU	gene	translation-rna	−	8367	8455	88
trnG-UCC	gene	translation-rna	+	9135	9896	761
trnR-UCU	gene	translation-rna	+	10072	10144	72
atpA	gene	atp-synthase	−	10249	11773	1524
atpF	gene	atp-synthase	−	11887	13127	1240
atpH	gene	atp-synthase	−	13483	13729	246
atpI	gene	atp-synthase	−	14695	15439	744
rps2	gene	ribosomal-protein	−	15654	16365	711
rpoC2	gene	rna-polymerase	−	16600	20740	4140
rpoC1	gene	rna-polymerase	−	20912	23758	2846
rpoB	gene	rna-polymerase	−	23784	26997	3213
trnC-GCA	gene	translation-rna	+	28171	28242	71
petN	gene	cytochrome	+	28549	28639	90
psbM	gene	photosystem-ii	−	29167	29272	105
trnD-GUC	gene	translation-rna	−	29786	29860	74
trnY-GUA	gene	translation-rna	−	29959	30043	84
trnE-UUC	gene	translation-rna	−	30102	30175	73
trnT-GGU	gene	translation-rna	+	30581	30653	72
psbD	gene	photosystem-ii	+	32054	33116	1062
psbC	gene	photosystem-ii	+	33063	34485	1422
trnS-UGA	gene	translation-rna	−	34739	34832	93
psbZ	gene	photosystem-ii	+	35157	35346	189
trnG-GCC	gene	translation-rna	+	35613	35684	71
trnM-CAU	gene	translation-rna	−	35861	35936	75
rps14	gene	ribosomal-protein	−	36080	36383	303
psaB	gene	photosystem-i	−	36505	38710	2205
psaA	gene	photosystem-i	−	38735	40988	2253
ycf3	gene	other	−	41683	43584	1901
trnS-GGA	gene	translation-rna	+	44010	44097	87
rps4	gene	ribosomal-protein	−	44406	45012	606
trnT-UGU	gene	translation-rna	−	45353	45426	73
trnL-UAA	gene	translation-rna	+	46062	46628	566
trnF-GAA	gene	translation-rna	+	46926	47000	74
ndhJ	gene	nad-dehydrogenase	−	47644	48121	477
ndhK	gene	nad-dehydrogenase	−	48221	48905	684
ndhC	gene	nad-dehydrogenase	−	48957	49320	363
trnV-UAC	gene	translation-rna	−	50162	50830	668
trnM-CAU	gene	translation-rna	+	51010	51083	73
atpE	gene	atp-synthase	−	51282	51684	402
atpB	gene	atp-synthase	−	51680	53177	1497
rbcL	gene	other	+	53978	55427	1449
accD	gene	other	+	56090	57626	1536
psaI	gene	photosystem-i	+	58056	58167	111
ycf4	gene	other	+	58572	59127	555
cemA	gene	other	+	59779	60469	690
petA	gene	cytochrome	+	60702	61665	963
psbJ	gene	photosystem-ii	−	62557	62680	123
psbL	gene	photosystem-ii	−	62821	62938	117
psbF	gene	photosystem-ii	−	62961	63081	120
psbE	gene	photosystem-ii	−	63095	63347	252
petL	gene	cytochrome	+	64236	64332	96
petG	gene	cytochrome	+	64501	64615	114
trnW-CCA	gene	translation-rna	−	64741	64815	74
trnP-UGG	gene	translation-rna	−	64976	65050	74
psaJ	gene	photosystem-i	+	65351	65486	135
rpl33	gene	ribosomal-protein	+	65959	66160	201
rps18	gene	ribosomal-protein	+	66340	66646	306
rpl20	gene	ribosomal-protein	−	66892	67279	387
rps12	gene	ribosomal-protein	−	68112	96197	28085
rps12	gene	ribosomal-protein	+	68112	137243	69131
clpP	gene	other	−	68541	70295	1754
psbB	gene	photosystem-ii	+	70751	72278	1527
psbT	gene	photosystem-ii	+	72453	72555	102
psbN	gene	photosystem-ii	−	72620	72752	132
psbH	gene	photosystem-ii	+	72857	73079	222
petB	gene	cytochrome	+	73206	74541	1335
petD	gene	cytochrome	+	74734	75949	1215
rpoA	gene	rna-polymerase	−	76134	77148	1014
rps11	gene	ribosomal-protein	−	77220	77637	417
rpl36	gene	ribosomal-protein	−	77738	77852	114
infA	gene	other	−	77947	78181	234
rps8	gene	ribosomal-protein	−	78314	78719	405
rpl14	gene	ribosomal-protein	−	78886	79255	369
rpl16	gene	ribosomal-protein	−	79382	80621	1239
rps3	gene	ribosomal-protein	−	80778	81429	651
rpl22	gene	ribosomal-protein	−	81413	81881	468
rps19	gene	ribosomal-protein	−	81935	82214	279
rpl2	gene	ribosomal-protein	−	82266	83755	1489
rpl23	gene	ribosomal-protein	−	83773	84055	282
trnI-CAU	gene	translation-rna	−	84220	84294	74
ycf2	gene	other	+	84382	91165	6783
ycf15	gene	other	+	91225	91504	279
trnL-CAA	gene	translation-rna	−	91771	91852	81
ndhB	gene	nad-dehydrogenase	−	92400	94613	2213
rps7	gene	ribosomal-protein	−	94879	95347	468
trnV-GAC	gene	translation-rna	+	97774	97846	72
rrn16	gene	ribosomal-rna	−	98077	99567	1490
trnI-GAU	gene	translation-rna	+	99866	100886	1020
trnA-UGC	gene	translation-rna	+	100945	101822	877
rrn23	gene	ribosomal-rna	+	101983	104901	2918
rrn4.5	gene	ribosomal-rna	+	104900	105003	103
rrn5	gene	ribosomal-rna	+	105232	105353	121
trnR-ACG	gene	translation-rna	+	105605	105679	74
trnN-GUU	gene	translation-rna	−	106238	106310	72
ycf1	gene	other	+	106651	107806	1155
ndhF	gene	nad-dehydrogenase	−	107696	109937	2241
rpl32	gene	ribosomal-protein	+	110473	110650	177
trnL-UAG	gene	translation-rna	+	111049	111129	80
ccsA	gene	other	+	111222	112194	972
ndhD	gene	nad-dehydrogenase	−	112448	113759	1311
psaC	gene	photosystem-i	−	114071	114317	246
ndhE	gene	nad-dehydrogenase	−	114574	114880	306
ndhG	gene	nad-dehydrogenase	−	115115	115646	531
ndhI	gene	nad-dehydrogenase	−	115992	116499	507
ndhA	gene	nad-dehydrogenase	−	116574	118647	2073
ndhH	gene	nad-dehydrogenase	−	118648	119830	1182
rps15	gene	ribosomal-protein	−	119926	120199	273
ycf1	gene	other	−	120577	125992	5415
trnN-GUU	gene	translation-rna	+	126333	126405	72
trnR-ACG	gene	translation-rna	−	126964	127038	74
rrn5	gene	ribosomal-rna	−	127290	127411	121
rrn4.5	gene	ribosomal-rna	−	127640	127743	103
rrn23	gene	ribosomal-rna	−	127742	130660	2918
trnA-UGC	gene	translation-rna	−	130821	131698	877
trnI-GAU	gene	translation-rna	−	131757	132777	1020
rrn16	gene	ribosomal-rna	+	133076	134566	1490
trnV-GAC	gene	translation-rna	−	134797	134869	72
rps7	gene	ribosomal-protein	+	137296	137764	468
ndhB	gene	nad-dehydrogenase	+	138030	140243	2213
trnL-CAA	gene	translation-rna	+	140791	140872	81
ycf15	gene	other	−	141139	141418	279
ycf2	gene	other	−	141478	148261	6783
trnI-CAU	gene	translation-rna	+	148349	148423	74
rpl23	gene	ribosomal-protein	+	148588	148870	282
rpl2	gene	ribosomal-protein	+	148888	150377	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_071844.1DNA · accDNC_071844DNA · atpBNC_071844DNA · matKNC_071844DNA · ndhFNC_071844DNA · psbANC_071844DNA · rbcLNC_071844DNA · rps12NC_071844DNA · ycf1NC_071844