Coordinate-aware organelle record

Ajuga pyramidalis subsp. pyramidalis chloroplast genome

Available PP024533.1 150,099 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	77	75
psbA	gene	photosystem-ii	−	399	1458	1059
trnK-UUU	gene	translation-rna	−	1689	4257	2568
matK	gene	other	−	1992	3519	1527
rps16	gene	ribosomal-protein	−	5131	6275	1144
trnQ-UUG	gene	translation-rna	−	7052	7124	72
psbK	gene	photosystem-ii	+	7453	7639	186
psbI	gene	photosystem-ii	+	8023	8134	111
trnS-GCU	gene	translation-rna	−	8251	8339	88
trnG-UCC	gene	translation-rna	+	9018	9779	761
trnR-UCU	gene	translation-rna	+	9973	10045	72
atpA	gene	atp-synthase	−	10150	11674	1524
atpF	gene	atp-synthase	−	11751	12992	1241
atpH	gene	atp-synthase	−	13347	13593	246
atpI	gene	atp-synthase	−	14550	15294	744
rps2	gene	ribosomal-protein	−	15490	16201	711
rpoC2	gene	rna-polymerase	−	16493	20561	4068
rpoC1	gene	rna-polymerase	−	20733	23578	2845
rpoB	gene	rna-polymerase	−	23604	26817	3213
trnC-GCA	gene	translation-rna	+	27957	28028	71
petN	gene	cytochrome	+	28335	28425	90
psbM	gene	photosystem-ii	−	28940	29045	105
trnD-GUC	gene	translation-rna	−	29549	29626	77
trnY-GUA	gene	translation-rna	−	29723	29809	86
trnE-UUC	gene	translation-rna	−	29867	29940	73
trnT-GGU	gene	translation-rna	+	30355	30429	74
psbD	gene	photosystem-ii	+	31804	32866	1062
psbC	gene	photosystem-ii	+	32813	34235	1422
trnS-UGA	gene	translation-rna	−	34489	34582	93
psbZ	gene	photosystem-ii	+	34907	35096	189
trnG-GCC	gene	translation-rna	+	35362	35434	72
trnM-CAU	gene	translation-rna	−	35602	35677	75
rps14	gene	ribosomal-protein	−	35821	36124	303
psaB	gene	photosystem-i	−	36245	38450	2205
psaA	gene	photosystem-i	−	38475	40728	2253
ycf3	gene	other	−	41426	43351	1925
trnS-GGA	gene	translation-rna	+	43774	43862	88
rps4	gene	ribosomal-protein	−	44170	44776	606
trnT-UGU	gene	translation-rna	−	45137	45212	75
trnL-UAA	gene	translation-rna	+	45865	46432	567
trnF-GAA	gene	translation-rna	+	46729	46803	74
ndhJ	gene	nad-dehydrogenase	−	47454	47931	477
ndhK	gene	nad-dehydrogenase	−	48031	48715	684
ndhC	gene	nad-dehydrogenase	−	48767	49130	363
trnV-UAC	gene	translation-rna	−	49923	50588	665
trnM-CAU	gene	translation-rna	+	50768	50841	73
atpE	gene	atp-synthase	−	51040	51442	402
atpB	gene	atp-synthase	−	51438	52935	1497
rbcL	gene	other	+	53713	55183	1470
accD	gene	other	+	55904	57380	1476
psaI	gene	photosystem-i	+	57823	57934	111
ycf4	gene	other	+	58352	58907	555
cemA	gene	other	+	59558	60248	690
petA	gene	cytochrome	+	60463	61426	963
psbJ	gene	photosystem-ii	−	62328	62451	123
psbL	gene	photosystem-ii	−	62584	62701	117
psbF	gene	photosystem-ii	−	62724	62844	120
psbE	gene	photosystem-ii	−	62858	63110	252
petL	gene	cytochrome	+	64005	64101	96
petG	gene	cytochrome	+	64270	64384	114
trnW-CCA	gene	translation-rna	−	64507	64581	74
trnP-UGG	gene	translation-rna	−	64740	64816	76
psaJ	gene	photosystem-i	+	65119	65254	135
rpl33	gene	ribosomal-protein	+	65727	65928	201
rps18	gene	ribosomal-protein	+	66108	66414	306
rpl20	gene	ribosomal-protein	−	66658	67051	393
rps12	gene	ribosomal-protein	−	67885	95899	28014
rps12	gene	ribosomal-protein	+	67885	136879	68994
clpP1	gene	other	−	68124	70056	1932
psbB	gene	photosystem-ii	+	70507	72034	1527
psbT	gene	photosystem-ii	+	72208	72310	102
psbN	gene	photosystem-ii	−	72375	72507	132
psbH	gene	photosystem-ii	+	72612	72834	222
petB	gene	cytochrome	+	72950	74288	1338
petD	gene	cytochrome	+	74481	75696	1215
rpoA	gene	rna-polymerase	−	75881	76895	1014
rps11	gene	ribosomal-protein	−	76964	77381	417
rpl36	gene	ribosomal-protein	−	77482	77596	114
infA	gene	other	−	77691	77925	234
rps8	gene	ribosomal-protein	−	78055	78460	405
rpl14	gene	ribosomal-protein	−	78614	78983	369
rpl16	gene	ribosomal-protein	−	79110	80345	1235
rps3	gene	ribosomal-protein	−	80507	81158	651
rpl22	gene	ribosomal-protein	−	81142	81610	468
rps19	gene	ribosomal-protein	−	81664	81943	279
rpl2	gene	ribosomal-protein	−	81995	83484	1489
rpl23	gene	ribosomal-protein	−	83502	83784	282
trnM-CAU	gene	translation-rna	−	83948	84023	75
ycf2	gene	other	+	84111	90858	6747
ycf15	gene	other	+	90999	91197	198
trnL-CAA	gene	translation-rna	−	91463	91546	83
ndhB	gene	nad-dehydrogenase	−	92093	94306	2213
rps7	gene	ribosomal-protein	−	94581	95049	468
trnV-GAC	gene	translation-rna	+	97476	97548	72
rrn16	gene	ribosomal-rna	+	97777	99268	1491
trnE-UUC	gene	translation-rna	+	99566	100586	1020
trnA-UGC	gene	translation-rna	+	100645	101522	877
rrn23	gene	ribosomal-rna	+	101683	104502	2819
rrn4.5	gene	ribosomal-rna	+	104600	104703	103
rrn5	gene	ribosomal-rna	+	104932	105053	121
trnR-ACG	gene	translation-rna	+	105297	105372	75
trnN-GUU	gene	translation-rna	−	105929	106003	74
ycf1	gene	other	+	106343	107498	1155
ndhF	gene	nad-dehydrogenase	−	107388	109629	2241
rpl32	gene	ribosomal-protein	+	110154	110331	177
trnL-UAG	gene	translation-rna	+	110728	110808	80
ccsA	gene	other	+	110902	111874	972
ndhD	gene	nad-dehydrogenase	−	112090	113593	1503
psaC	gene	photosystem-i	−	113712	113958	246
ndhE	gene	nad-dehydrogenase	−	114228	114534	306
ndhG	gene	nad-dehydrogenase	−	114761	115292	531
ndhI	gene	nad-dehydrogenase	−	115660	116167	507
ndhA	gene	nad-dehydrogenase	−	116242	118311	2069
ndhH	gene	nad-dehydrogenase	−	118312	119548	1236
rps15	gene	ribosomal-protein	−	119590	119863	273
ycf1	gene	other	−	120238	125761	5523
trnN-GUU	gene	translation-rna	+	125978	126052	74
trnR-ACG	gene	translation-rna	−	126609	126684	75
rrn5	gene	ribosomal-rna	−	126928	127049	121
rrn4.5	gene	ribosomal-rna	−	127278	127381	103
rrn23	gene	ribosomal-rna	−	127479	130298	2819
trnA-UGC	gene	translation-rna	−	130459	131335	876
trnE-UUC	gene	translation-rna	−	131395	132415	1020
rrn16	gene	ribosomal-rna	−	132713	134204	1491
trnV-GAC	gene	translation-rna	−	134433	134505	72
rps7	gene	ribosomal-protein	+	136932	137400	468
ndhB	gene	nad-dehydrogenase	+	137675	139888	2213
trnL-CAA	gene	translation-rna	+	140435	140518	83
ycf15	gene	other	−	140784	140982	198
ycf2	gene	other	−	141123	147870	6747
trnM-CAU	gene	translation-rna	+	147958	148033	75
rpl23	gene	ribosomal-protein	+	148197	148479	282
rpl2	gene	ribosomal-protein	+	148497	149986	1489
rps19	gene	ribosomal-protein	+	150038	150099	61

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP024533.1DNA · accDPP024533DNA · atpBPP024533DNA · matKPP024533DNA · ndhFPP024533DNA · psbAPP024533DNA · rbcLPP024533DNA · rps12PP024533DNA · ycf1PP024533