Coordinate-aware organelle record

Ajugoides humilis chloroplast genome

Available OR565921.1 152,202 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4181	2584
matK	gene	other	−	1896	3432	1536
rps16	gene	ribosomal-protein	−	5108	6254	1146
trnQ-UUG	gene	translation-rna	−	7201	7273	72
psbK	gene	photosystem-ii	+	7609	7795	186
psbI	gene	photosystem-ii	+	8169	8280	111
trnS-GCU	gene	translation-rna	−	8402	8490	88
trnG-UCC	gene	translation-rna	+	9181	9932	751
trnR-UCU	gene	translation-rna	+	10105	10180	75
atpA	gene	atp-synthase	−	10276	11800	1524
atpF	gene	atp-synthase	−	11887	13108	1221
atpH	gene	atp-synthase	−	13473	13719	246
atpI	gene	atp-synthase	−	14735	15479	744
rps2	gene	ribosomal-protein	−	15709	16420	711
rpoC2	gene	rna-polymerase	−	16641	20829	4188
rpoC1	gene	rna-polymerase	−	20983	23814	2831
rpoB	gene	rna-polymerase	−	23840	27053	3213
trnC-GCA	gene	translation-rna	+	28154	28230	76
petN	gene	cytochrome	+	29060	29156	96
psbM	gene	photosystem-ii	−	29943	30048	105
trnD-GUC	gene	translation-rna	−	30571	30645	74
trnY-GUA	gene	translation-rna	−	30759	30843	84
trnE-UUC	gene	translation-rna	−	30902	30975	73
trnT-GGU	gene	translation-rna	+	31534	31605	71
psbD	gene	photosystem-ii	+	32855	33917	1062
psbC	gene	photosystem-ii	+	33864	35286	1422
trnS-UGA	gene	translation-rna	−	35518	35611	93
psbZ	gene	photosystem-ii	+	35927	36116	189
trnG-GCC	gene	translation-rna	+	36340	36411	71
trnfM-CAU	gene	translation-rna	−	36560	36634	74
rps14	gene	ribosomal-protein	−	36783	37086	303
psaB	gene	photosystem-i	−	37213	39418	2205
psaA	gene	photosystem-i	−	39443	41696	2253
ycf3	gene	other	−	42423	44377	1954
trnS-GGA	gene	translation-rna	+	44693	44780	87
rps4	gene	ribosomal-protein	−	45077	45683	606
trnT-UGU	gene	translation-rna	−	46073	46146	73
trnL-UAA	gene	translation-rna	+	46819	47393	574
trnF-GAA	gene	translation-rna	+	47684	47757	73
ndhJ	gene	nad-dehydrogenase	−	48425	48920	495
ndhK	gene	nad-dehydrogenase	−	49002	49680	678
ndhC	gene	nad-dehydrogenase	−	49733	50096	363
trnV-UAC	gene	translation-rna	−	51061	51714	653
trnM-CAU	gene	translation-rna	+	51902	51975	73
atpE	gene	atp-synthase	−	52192	52594	402
atpB	gene	atp-synthase	−	52590	54087	1497
rbcL	gene	other	+	54868	56323	1455
accD	gene	other	+	57008	58475	1467
psaI	gene	photosystem-i	+	59163	59274	111
ycf4	gene	other	+	59709	60264	555
cemA	gene	other	+	60824	61514	690
petA	gene	cytochrome	+	61730	62693	963
psbJ	gene	photosystem-ii	−	63739	63862	123
psbL	gene	photosystem-ii	−	63999	64116	117
psbF	gene	photosystem-ii	−	64139	64259	120
psbE	gene	photosystem-ii	−	64273	64525	252
petL	gene	cytochrome	+	65456	65552	96
petG	gene	cytochrome	+	65726	65840	114
trnW-CCA	gene	translation-rna	−	65965	66039	74
trnP-UGG	gene	translation-rna	−	66208	66282	74
psaJ	gene	photosystem-i	+	66556	66691	135
rpl33	gene	ribosomal-protein	+	67163	67364	201
rps18	gene	ribosomal-protein	+	67510	67816	306
rpl20	gene	ribosomal-protein	−	67995	68382	387
rps12	gene	ribosomal-protein	−	69148	97308	28160
rps12	gene	ribosomal-protein	+	69148	138931	69783
clpP	gene	other	−	69388	71253	1865
psbB	gene	photosystem-ii	+	71690	73217	1527
psbT	gene	photosystem-ii	+	73409	73517	108
psbN	gene	photosystem-ii	−	73577	73709	132
psbH	gene	photosystem-ii	+	73812	74034	222
petB	gene	cytochrome	+	74148	75530	1382
petD	gene	cytochrome	+	75724	76946	1222
rpoA	gene	rna-polymerase	−	77108	78122	1014
rps11	gene	ribosomal-protein	−	78193	78625	432
rpl36	gene	ribosomal-protein	−	78712	78826	114
infA	gene	other	−	78921	79155	234
rps8	gene	ribosomal-protein	−	79283	79697	414
rpl14	gene	ribosomal-protein	−	79887	80256	369
rpl16	gene	ribosomal-protein	−	80382	81689	1307
rps3	gene	ribosomal-protein	−	81835	82498	663
rpl22	gene	ribosomal-protein	−	82482	82947	465
rps19	gene	ribosomal-protein	−	83006	83285	279
rpl2	gene	ribosomal-protein	−	83336	84828	1492
rpl23	gene	ribosomal-protein	−	85022	85175	153
trnI-CAU	gene	translation-rna	−	85293	85367	74
ycf2	gene	other	+	85455	92340	6885
ycf15	gene	other	+	92382	92631	249
trnL-CAA	gene	translation-rna	−	92891	92972	81
ndhB	gene	nad-dehydrogenase	−	93507	95719	2212
rps7	gene	ribosomal-protein	−	95993	96461	468
trnV-GAC	gene	translation-rna	+	98924	98996	72
rrn16	gene	ribosomal-rna	+	99223	100714	1491
trnI-GAU	gene	translation-rna	+	101003	102012	1009
trnA-UGC	gene	translation-rna	+	102076	102955	879
rrn23	gene	ribosomal-rna	+	103147	105957	2810
rrn4.5	gene	ribosomal-rna	+	106055	106158	103
rrn5	gene	ribosomal-rna	+	106413	106534	121
trnR-ACG	gene	translation-rna	+	106768	106841	73
trnN-GUU	gene	translation-rna	−	107408	107480	72
ndhF	gene	nad-dehydrogenase	−	108869	111086	2217
rpl32	gene	ribosomal-protein	+	111590	111767	177
trnL-UAG	gene	translation-rna	+	112491	112571	80
ccsA	gene	other	+	112655	113627	972
ndhD	gene	nad-dehydrogenase	−	113809	115330	1521
psaC	gene	photosystem-i	−	115429	115675	246
ndhE	gene	nad-dehydrogenase	−	115937	116243	306
ndhG	gene	nad-dehydrogenase	−	116464	116995	531
ndhI	gene	nad-dehydrogenase	−	117399	117906	507
ndhA	gene	nad-dehydrogenase	−	117992	120151	2159
ndhH	gene	nad-dehydrogenase	−	120152	121334	1182
rps15	gene	ribosomal-protein	−	121434	121770	336
ycf1	gene	other	−	122087	127640	5553
trnN-GUU	gene	translation-rna	+	127965	128037	72
trnR-ACG	gene	translation-rna	−	128604	128677	73
rrn5	gene	ribosomal-rna	−	128911	129032	121
rrn4.5	gene	ribosomal-rna	−	129287	129390	103
rrn23	gene	ribosomal-rna	−	129488	132298	2810
trnA-UGC	gene	translation-rna	−	132490	133369	879
trnI-GAU	gene	translation-rna	−	133433	134442	1009
rrn16	gene	ribosomal-rna	−	134731	136222	1491
trnV-GAC	gene	translation-rna	−	136449	136521	72
rps7	gene	ribosomal-protein	+	138984	139452	468
ndhB	gene	nad-dehydrogenase	+	139726	141938	2212
trnL-CAA	gene	translation-rna	+	142473	142554	81
ycf15	gene	other	−	142814	143078	264
ycf2	gene	other	−	143105	149990	6885
trnI-CAU	gene	translation-rna	+	150078	150152	74
rpl23	gene	ribosomal-protein	+	150270	150423	153
rpl2	gene	ribosomal-protein	+	150617	152109	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565921.1DNA · accDOR565921DNA · atpBOR565921DNA · matKOR565921DNA · ndhFOR565921DNA · psbAOR565921DNA · rbcLOR565921DNA · rps12OR565921DNA · ycf1OR565921