LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Amethystea caerulea chloroplast dna

Available NC_068628.1 145,533 bp 129 genes
DNA resources Accession record
Amethystea caerulea chloroplast Biopython GenomeDiagram 1.79; GenBank local location segments. IR IR trnH-GUG · NC_068628.1 · 2–75 bp · − psbA · NC_068628.1 · 191–1,249 bp · − trnK-UUU · NC_068628.1 · 1,502–4,082 bp · − matK · NC_068628.1 · 1,808–3,343 bp · − rps16 · NC_068628.1 · 4,220–5,314 bp · − trnQ-UUG · NC_068628.1 · 5,524–5,595 bp · − trnS-GCU · NC_068628.1 · 6,658–6,745 bp · − atpA · NC_068628.1 · 8,008–9,531 bp · − atpF · NC_068628.1 · 9,655–10,890 bp · − atpH · NC_068628.1 · 11,271–11,516 bp · − atpI · NC_068628.1 · 12,447–13,190 bp · − rps2 · NC_068628.1 · 13,385–14,095 bp · − rpoC2 · NC_068628.1 · 14,271–18,419 bp · − rpoC1 · NC_068628.1 · 18,581–21,422 bp · − rpoB · NC_068628.1 · 21,449–24,661 bp · − psbM · NC_068628.1 · 26,619–26,723 bp · − trnD-GUC · NC_068628.1 · 27,242–27,315 bp · − trnY-GUA · NC_068628.1 · 27,424–27,507 bp · − trnE-UUC · NC_068628.1 · 27,567–27,639 bp · − trnS-UGA · NC_068628.1 · 32,176–32,268 bp · − rps14 · NC_068628.1 · 33,518–33,820 bp · − psaB · NC_068628.1 · 33,943–36,147 bp · − psaA · NC_068628.1 · 36,173–38,425 bp · − ycf3 · NC_068628.1 · 39,053–40,994 bp · − rps4 · NC_068628.1 · 41,692–42,297 bp · − trnT-UGU · NC_068628.1 · 42,534–42,606 bp · − ndhJ · NC_068628.1 · 44,854–45,330 bp · − ndhK · NC_068628.1 · 45,431–46,108 bp · − ndhC · NC_068628.1 · 46,162–46,524 bp · − trnV-UAC · NC_068628.1 · 47,052–47,715 bp · − atpE · NC_068628.1 · 48,190–48,591 bp · − atpB · NC_068628.1 · 48,588–50,084 bp · − psbJ · NC_068628.1 · 58,799–58,921 bp · − psbL · NC_068628.1 · 59,063–59,179 bp · − psbF · NC_068628.1 · 59,203–59,322 bp · − psbE · NC_068628.1 · 59,337–59,588 bp · − trnW-CCA · NC_068628.1 · 61,007–61,080 bp · − trnP-UGG · NC_068628.1 · 61,243–61,316 bp · − rpl20 · NC_068628.1 · 63,112–63,498 bp · − rps12 · NC_068628.1 · 64,319–64,432 bp · − rps12 · NC_068628.1 · 91,673–92,469 bp · − clpP · NC_068628.1 · 64,759–66,502 bp · − psbN · NC_068628.1 · 68,819–68,950 bp · − rpoA · NC_068628.1 · 72,337–73,341 bp · − rps11 · NC_068628.1 · 73,413–73,829 bp · − rpl36 · NC_068628.1 · 73,931–74,044 bp · − infA · NC_068628.1 · 74,140–74,373 bp · − rps8 · NC_068628.1 · 74,498–74,902 bp · − rpl14 · NC_068628.1 · 75,063–75,431 bp · − rpl16 · NC_068628.1 · 75,558–76,823 bp · − rps3 · NC_068628.1 · 76,982–77,632 bp · − rpl22 · NC_068628.1 · 77,617–78,093 bp · − rps19 · NC_068628.1 · 78,149–78,427 bp · − rpl2 · NC_068628.1 · 78,481–79,972 bp · − rpl23 · NC_068628.1 · 79,991–80,272 bp · − trnI-CAU · NC_068628.1 · 80,438–80,511 bp · − trnL-CAA · NC_068628.1 · 88,037–88,117 bp · − ndhB · NC_068628.1 · 88,667–90,878 bp · − rps7 · NC_068628.1 · 91,152–91,619 bp · − rrn16 · NC_068628.1 · 94,371–95,860 bp · − trnN-GUU · NC_068628.1 · 102,543–102,614 bp · − ndhF · NC_068628.1 · 103,994–106,030 bp · − ndhD · NC_068628.1 · 108,149–109,684 bp · − psaC · NC_068628.1 · 109,772–110,017 bp · − ndhE · NC_068628.1 · 110,268–110,573 bp · − ndhG · NC_068628.1 · 110,758–111,288 bp · − ndhI · NC_068628.1 · 111,513–112,019 bp · − ndhA · NC_068628.1 · 112,101–114,126 bp · − ndhH · NC_068628.1 · 114,128–115,309 bp · − rps15 · NC_068628.1 · 115,406–115,678 bp · − ycf1 · NC_068628.1 · 115,796–120,964 bp · − trnR-ACG · NC_068628.1 · 121,944–122,017 bp · − rrn5 · NC_068628.1 · 122,262–122,382 bp · − rrn4.5 · NC_068628.1 · 122,612–122,714 bp · − rrn23 · NC_068628.1 · 122,714–125,631 bp · − trnA-UGC · NC_068628.1 · 125,793–126,675 bp · − trnI-GAU · NC_068628.1 · 126,740–127,759 bp · − trnV-GAC · NC_068628.1 · 129,776–129,847 bp · − ycf2 · NC_068628.1 · 136,489–143,319 bp · − psbK · NC_068628.1 · 5,925–6,110 bp · + psbI · NC_068628.1 · 6,428–6,538 bp · + trnG-UCC · NC_068628.1 · 6,935–7,689 bp · + trnR-UCU · NC_068628.1 · 7,822–7,893 bp · + trnC-GCA · NC_068628.1 · 25,640–25,710 bp · + petN · NC_068628.1 · 25,897–25,986 bp · + trnT-GGU · NC_068628.1 · 28,170–28,241 bp · + psbD · NC_068628.1 · 29,491–30,552 bp · + psbC · NC_068628.1 · 30,500–31,921 bp · + psbZ · NC_068628.1 · 32,598–32,786 bp · + trnG-GCC · NC_068628.1 · 33,052–33,122 bp · + trnS-GGA · NC_068628.1 · 41,311–41,397 bp · + trnL-UAA · NC_068628.1 · 43,302–43,871 bp · + trnP-GAA · NC_068628.1 · 44,169–44,241 bp · + trnM-CAU · NC_068628.1 · 47,896–47,968 bp · + rbcL · NC_068628.1 · 50,851–52,290 bp · + accD · NC_068628.1 · 52,915–54,453 bp · + psaI · NC_068628.1 · 54,718–54,828 bp · + ycf4 · NC_068628.1 · 55,222–55,776 bp · + cemA · NC_068628.1 · 56,433–57,122 bp · + petA · NC_068628.1 · 57,331–58,293 bp · + petL · NC_068628.1 · 60,500–60,595 bp · + petG · NC_068628.1 · 60,770–60,883 bp · + psaJ · NC_068628.1 · 61,590–61,724 bp · + rpl33 · NC_068628.1 · 62,197–62,397 bp · + rps18 · NC_068628.1 · 62,569–62,874 bp · + rps12 · NC_068628.1 · 131,450–132,246 bp · + psbB · NC_068628.1 · 66,949–68,475 bp · + psbT · NC_068628.1 · 68,651–68,758 bp · + psbH · NC_068628.1 · 69,056–69,277 bp · + petB · NC_068628.1 · 69,398–70,757 bp · + petD · NC_068628.1 · 70,946–72,160 bp · + ycf2 · NC_068628.1 · 80,600–87,430 bp · + trnV-GAC · NC_068628.1 · 94,072–94,143 bp · + trnI-GAU · NC_068628.1 · 96,160–97,179 bp · + trnA-UGC · NC_068628.1 · 97,244–98,126 bp · + rrn23 · NC_068628.1 · 98,288–101,205 bp · + rrn4.5 · NC_068628.1 · 101,205–101,307 bp · + rrn5 · NC_068628.1 · 101,537–101,657 bp · + trnR-ACG · NC_068628.1 · 101,902–101,975 bp · + rpl32 · NC_068628.1 · 106,401–106,577 bp · + trnL-UAG · NC_068628.1 · 106,876–106,955 bp · + ccsA · NC_068628.1 · 107,038–108,009 bp · + trnN-GUU · NC_068628.1 · 121,305–121,376 bp · + rrn16 · NC_068628.1 · 128,059–129,548 bp · + rps7 · NC_068628.1 · 132,300–132,767 bp · + ndhB · NC_068628.1 · 133,041–135,252 bp · + trnL-CAA · NC_068628.1 · 135,802–135,882 bp · + trnI-CAU · NC_068628.1 · 143,408–143,481 bp · + rpl23 · NC_068628.1 · 143,647–143,928 bp · + rpl2 · NC_068628.1 · 143,947–145,438 bp · + 0 kb 12 kb 24 kb 36 kb 48 kb 60 kb 72 kb 84 kb 96 kb 108 kb 120 kb 132 kb Amethystea caerulea ANNOTATED PLASTOME NC_068628.1 145,533 bp · 129 genes Gene function Transfer RNA Photosystem II Other Ribosomal protein ATP synthase RNA polymerase Cytochrome Photosystem I NADH dehydrogenase Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

130 local segments
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−27574
psbAgenephotosystem-ii−19112491059
trnK-UUUgenetranslation-rna−150240822581
matKgeneother−180833431536
rps16generibosomal-protein−422053141095
trnQ-UUGgenetranslation-rna−5524559572
psbKgenephotosystem-ii+59256110186
psbIgenephotosystem-ii+64286538111
trnS-GCUgenetranslation-rna−6658674588
trnG-UCCgenetranslation-rna+69357689755
trnR-UCUgenetranslation-rna+7822789372
atpAgeneatp-synthase−800895311524
atpFgeneatp-synthase−9655108901236
atpHgeneatp-synthase−1127111516246
atpIgeneatp-synthase−1244713190744
rps2generibosomal-protein−1338514095711
rpoC2generna-polymerase−14271184194149
rpoC1generna-polymerase−18581214222842
rpoBgenerna-polymerase−21449246613213
trnC-GCAgenetranslation-rna+256402571071
petNgenecytochrome+258972598690
psbMgenephotosystem-ii−2661926723105
trnD-GUCgenetranslation-rna−272422731574
trnY-GUAgenetranslation-rna−274242750784
trnE-UUCgenetranslation-rna−275672763973
trnT-GGUgenetranslation-rna+281702824172
psbDgenephotosystem-ii+29491305521062
psbCgenephotosystem-ii+30500319211422
trnS-UGAgenetranslation-rna−321763226893
psbZgenephotosystem-ii+3259832786189
trnG-GCCgenetranslation-rna+330523312271
rps14generibosomal-protein−3351833820303
psaBgenephotosystem-i−33943361472205
psaAgenephotosystem-i−36173384252253
ycf3geneother−39053409941942
trnS-GGAgenetranslation-rna+413114139787
rps4generibosomal-protein−4169242297606
trnT-UGUgenetranslation-rna−425344260673
trnL-UAAgenetranslation-rna+4330243871570
trnP-GAAgenetranslation-rna+441694424173
ndhJgenenad-dehydrogenase−4485445330477
ndhKgenenad-dehydrogenase−4543146108678
ndhCgenenad-dehydrogenase−4616246524363
trnV-UACgenetranslation-rna−4705247715664
trnM-CAUgenetranslation-rna+478964796873
atpEgeneatp-synthase−4819048591402
atpBgeneatp-synthase−48588500841497
rbcLgeneother+50851522901440
accDgeneother+52915544531539
psaIgenephotosystem-i+5471854828111
ycf4geneother+5522255776555
cemAgeneother+5643357122690
petAgenecytochrome+5733158293963
psbJgenephotosystem-ii−5879958921123
psbLgenephotosystem-ii−5906359179117
psbFgenephotosystem-ii−5920359322120
psbEgenephotosystem-ii−5933759588252
petLgenecytochrome+605006059596
petGgenecytochrome+6077060883114
trnW-CCAgenetranslation-rna−610076108074
trnP-UGGgenetranslation-rna−612436131674
psaJgenephotosystem-i+6159061724135
rpl33generibosomal-protein+6219762397201
rps18generibosomal-protein+6256962874306
rpl20generibosomal-protein−6311263498387
rps12generibosomal-protein−6431964432114
clpPgeneother−64759665021744
psbBgenephotosystem-ii+66949684751527
psbTgenephotosystem-ii+6865168758108
psbNgenephotosystem-ii−6881968950132
psbHgenephotosystem-ii+6905669277222
petBgenecytochrome+69398707571360
petDgenecytochrome+70946721601215
rpoAgenerna-polymerase−72337733411005
rps11generibosomal-protein−7341373829417
rpl36generibosomal-protein−7393174044114
infAgeneother−7414074373234
rps8generibosomal-protein−7449874902405
rpl14generibosomal-protein−7506375431369
rpl16generibosomal-protein−75558768231266
rps3generibosomal-protein−7698277632651
rpl22generibosomal-protein−7761778093477
rps19generibosomal-protein−7814978427279
rpl2generibosomal-protein−78481799721492
rpl23generibosomal-protein−7999180272282
trnI-CAUgenetranslation-rna−804388051174
ycf2geneother+80600874306831
trnL-CAAgenetranslation-rna−880378811781
ndhBgenenad-dehydrogenase−88667908782212
rps7generibosomal-protein−9115291619468
rps12generibosomal-protein−9167392469797
trnV-GACgenetranslation-rna+940729414372
rrn16generibosomal-rna−94371958601490
trnI-GAUgenetranslation-rna+96160971791020
trnA-UGCgenetranslation-rna+9724498126883
rrn23generibosomal-rna+982881012052918
rrn4.5generibosomal-rna+101205101307103
rrn5generibosomal-rna+101537101657121
trnR-ACGgenetranslation-rna+10190210197574
trnN-GUUgenetranslation-rna−10254310261472
ndhFgenenad-dehydrogenase−1039941060302037
rpl32generibosomal-protein+106401106577177
trnL-UAGgenetranslation-rna+10687610695580
ccsAgeneother+107038108009972
ndhDgenenad-dehydrogenase−1081491096841536
psaCgenephotosystem-i−109772110017246
ndhEgenenad-dehydrogenase−110268110573306
ndhGgenenad-dehydrogenase−110758111288531
ndhIgenenad-dehydrogenase−111513112019507
ndhAgenenad-dehydrogenase−1121011141262026
ndhHgenenad-dehydrogenase−1141281153091182
rps15generibosomal-protein−115406115678273
ycf1geneother−1157961209645169
trnN-GUUgenetranslation-rna+12130512137672
trnR-ACGgenetranslation-rna−12194412201774
rrn5generibosomal-rna−122262122382121
rrn4.5generibosomal-rna−122612122714103
rrn23generibosomal-rna−1227141256312918
trnA-UGCgenetranslation-rna−125793126675883
trnI-GAUgenetranslation-rna−1267401277591020
rrn16generibosomal-rna+1280591295481490
trnV-GACgenetranslation-rna−12977612984772
rps12generibosomal-protein+131450132246797
rps7generibosomal-protein+132300132767468
ndhBgenenad-dehydrogenase+1330411352522212
trnL-CAAgenetranslation-rna+13580213588281
ycf2geneother−1364891433196831
trnI-CAUgenetranslation-rna+14340814348174
rpl23generibosomal-protein+143647143928282
rpl2generibosomal-protein+1439471454381492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Chloroplast DNANC_068628.1DNA · accDNC_068628DNA · atpBNC_068628DNA · matKNC_068628DNA · ndhFNC_068628DNA · psbANC_068628DNA · rbcLNC_068628DNA · rps12NC_068628DNA · ycf1NC_068628