Coordinate-aware organelle record

Callicarpa brevipes chloroplast genome

Available NC_058322.1 154,182 bp 135 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

135 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	433	1492	1059
trnK-UUU	gene	translation-rna	−	1745	4317	2572
matK	gene	other	−	2039	3575	1536
matK	CDS	other	−	2051	3575	1524
rps16	gene	ribosomal-protein	−	5181	6315	1134
trnQ-UUG	gene	translation-rna	−	7463	7535	72
psbK	gene	photosystem-ii	+	7859	8054	195
psbI	gene	photosystem-ii	+	8444	8555	111
trnS-GCU	gene	translation-rna	−	8672	8760	88
trnG-UCC	gene	translation-rna	+	9467	10228	761
trnR-UCU	gene	translation-rna	+	10404	10476	72
atpA	gene	atp-synthase	−	10580	12104	1524
atpF	gene	atp-synthase	−	12171	13418	1247
atpH	gene	atp-synthase	−	13786	14032	246
atpI	gene	atp-synthase	−	15047	15791	744
rps2	gene	ribosomal-protein	−	16021	16732	711
rpoC	gene	rna-polymerase	−	16948	21130	4182
rpoC1	gene	rna-polymerase	−	21284	24115	2831
rpoB	gene	rna-polymerase	−	24141	27330	3189
trnC-GCA	gene	translation-rna	+	28529	28600	71
petN	gene	cytochrome	+	29431	29521	90
psbM	gene	photosystem-ii	−	30430	30535	105
trnD-GUC	gene	translation-rna	−	31070	31144	74
trnY-GUA	gene	translation-rna	−	31252	31336	84
trnE-UUC	gene	translation-rna	−	31395	31468	73
trnT-GGU	gene	translation-rna	+	32024	32096	72
psbD	gene	photosystem-ii	+	33475	34537	1062
psbC	gene	photosystem-ii	+	34484	35906	1422
trnS-UGA	gene	translation-rna	−	36147	36240	93
psbZ	gene	photosystem-ii	+	36569	36758	189
trnG-GCC	gene	translation-rna	+	37033	37104	71
trnfM-CAU	gene	translation-rna	−	37255	37329	74
rps14	gene	ribosomal-protein	−	37478	37781	303
psaB	gene	photosystem-i	−	37903	40108	2205
psaA	gene	photosystem-i	−	40133	42386	2253
ycf3	gene	other	−	43100	45055	1955
trnS-GGA	gene	translation-rna	+	45889	45976	87
rps4	gene	ribosomal-protein	−	46256	46862	606
trnT-UGU	gene	translation-rna	−	47229	47302	73
trnL-UAA	gene	translation-rna	+	47974	48552	578
trnF-GAA	gene	translation-rna	+	48888	48971	83
ndhJ	gene	nad-dehydrogenase	−	49609	50086	477
ndhK	gene	nad-dehydrogenase	−	50186	50864	678
ndhC	gene	nad-dehydrogenase	−	50917	51280	363
trnV-UAC	gene	translation-rna	−	52469	53122	653
trnM-CAU	gene	translation-rna	+	53303	53376	73
atpE	gene	atp-synthase	−	53583	53985	402
atpB	gene	atp-synthase	−	53981	55484	1503
rbcL	gene	other	+	56263	57703	1440
accD	gene	other	+	58337	59882	1545
psaI	gene	photosystem-i	+	60583	60694	111
ycf4	gene	other	+	61132	61687	555
cemA	gene	other	+	62334	63024	690
petA	gene	cytochrome	+	63213	64176	963
psbJ	gene	photosystem-ii	−	65111	65234	123
psbL	gene	photosystem-ii	−	65367	65484	117
psbF	gene	photosystem-ii	−	65507	65627	120
psbE	gene	photosystem-ii	−	65641	65893	252
petL	gene	cytochrome	+	66822	66918	96
petG	gene	cytochrome	+	67092	67206	114
trnW-CCA	gene	translation-rna	−	67334	67408	74
trnP-UGG	gene	translation-rna	−	67570	67644	74
psaJ	gene	photosystem-i	+	68035	68170	135
rpl33	gene	ribosomal-protein	+	68649	68850	201
rps18	gene	ribosomal-protein	+	69020	69326	306
rpl20	gene	ribosomal-protein	−	69561	69948	387
rps12	gene	ribosomal-protein	−	70769	99044	28275
rps12	gene	ribosomal-protein	+	70769	140872	70103
clpP	gene	other	−	71016	72965	1949
psbB	gene	photosystem-ii	+	73426	74953	1527
psbT	gene	photosystem-ii	+	75145	75253	108
psbN	gene	photosystem-ii	−	75313	75445	132
psbH	gene	photosystem-ii	+	75532	75772	240
petB	gene	cytochrome	+	75896	77273	1377
petD	gene	cytochrome	+	77461	78678	1217
rpoA	gene	rna-polymerase	−	78854	79868	1014
rps11	gene	ribosomal-protein	−	79939	80356	417
rpl36	gene	ribosomal-protein	−	80457	80571	114
infA	gene	other	−	80666	80900	234
rps8	gene	ribosomal-protein	−	81024	81429	405
rpl14	gene	ribosomal-protein	−	81600	81969	369
rpl16	gene	ribosomal-protein	−	82095	83390	1295
rps3	gene	ribosomal-protein	−	83532	84195	663
rpl22	gene	ribosomal-protein	−	84204	84642	438
rps19	gene	ribosomal-protein	−	84701	84980	279
rpl2	gene	ribosomal-protein	−	85035	86527	1492
rpl23	gene	ribosomal-protein	−	86545	86827	282
trnI-CAU	gene	translation-rna	−	86992	87066	74
ycf2	gene	other	+	87164	94025	6861
ycf15	gene	other	+	94106	94355	249
trnL-CAA	gene	translation-rna	−	94615	94696	81
ndhB	CDS	nad-dehydrogenase	−	95243	97455	2212
ndhB	gene	nad-dehydrogenase	−	95243	97456	2213
rps7	gene	ribosomal-protein	−	97729	98197	468
trnV-GAC	gene	translation-rna	+	100650	100722	72
rrn16	gene	ribosomal-rna	+	100967	102458	1491
trnI-GAU	gene	translation-rna	+	102756	103777	1021
trnA-UGC	gene	translation-rna	+	103841	104729	888
rrn23	gene	ribosomal-rna	+	104897	107708	2811
rrn4.5	gene	ribosomal-rna	+	107805	107908	103
rrn5	gene	ribosomal-rna	+	108163	108284	121
trnR-ACG	gene	translation-rna	+	108527	108601	74
trnN-GUU	gene	translation-rna	−	109170	109242	72
ycf1	gene	other	+	109571	110657	1086
ndhF	gene	nad-dehydrogenase	−	110646	112890	2244
rpl32	gene	ribosomal-protein	+	113408	113585	177
trnL-UAG; trnL-CAA	gene	translation-rna	+	114366	114446	80
ccsA	gene	other	+	114530	115502	972
ndhD	gene	nad-dehydrogenase	−	115768	117304	1536
psaC	gene	photosystem-i	−	117392	117638	246
ndhE	gene	nad-dehydrogenase	−	117888	118194	306
ndhG	gene	nad-dehydrogenase	−	118407	118938	531
ndhI	gene	nad-dehydrogenase	−	119286	119793	507
ndhA	gene	nad-dehydrogenase	−	119868	122053	2185
ndhH	gene	nad-dehydrogenase	−	122054	123236	1182
rps15	gene	ribosomal-protein	−	123332	123605	273
ycf1	gene	other	−	123986	129662	5676
trnN-GUU	gene	translation-rna	+	129880	129952	72
trnR-ACG	gene	translation-rna	−	130521	130595	74
rrn5	gene	ribosomal-rna	−	130838	130959	121
rrn4.5	gene	ribosomal-rna	−	131214	131317	103
rrn23	gene	ribosomal-rna	−	131414	134225	2811
trnA-UGC	gene	translation-rna	−	134393	135281	888
trnI-GAU	gene	translation-rna	−	135345	136366	1021
rrn16	gene	ribosomal-rna	−	136664	138155	1491
trnV-GAC	gene	translation-rna	−	138400	138472	72
rps7	gene	ribosomal-protein	+	140925	141393	468
ndhB	gene	nad-dehydrogenase	+	141667	143879	2212
trnL-CAA	gene	translation-rna	+	144426	144507	81
ycf15	gene	other	−	144767	145016	249
ycf2	gene	other	−	145097	151958	6861
trnI-CAU	gene	translation-rna	+	152056	152130	74
rpl23	gene	ribosomal-protein	+	152295	152577	282
rpl2	gene	ribosomal-protein	+	152595	154087	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_058322.1DNA · accDNC_058322DNA · atpBNC_058322DNA · matKNC_058322DNA · ndhFNC_058322DNA · psbANC_058322DNA · rbcLNC_058322DNA · rps12NC_058322DNA · ycf1NC_058322