Coordinate-aware organelle record

Callicarpa formosana chloroplast genome

Available NC_052748.1 154,210 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH(GUG)	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	426	1485	1059
trnK(UUU)	gene	translation-rna	−	1739	4311	2572
matK	gene	other	−	2045	3569	1524
rps16	gene	ribosomal-protein	−	5170	6304	1134
trnQ(UUG)	gene	translation-rna	−	7445	7517	72
psbK	gene	photosystem-ii	+	7850	8036	186
psbI	gene	photosystem-ii	+	8425	8536	111
trnS(GCU)	gene	translation-rna	−	8653	8741	88
trnG(UCC)	gene	translation-rna	+	9448	10208	760
trnR(UCU)	gene	translation-rna	+	10382	10457	75
atpA	gene	atp-synthase	−	10561	12085	1524
atpF	gene	atp-synthase	−	12152	13401	1249
atpH	gene	atp-synthase	−	13768	14014	246
atpI	gene	atp-synthase	−	15029	15773	744
rps2	gene	ribosomal-protein	−	16003	16714	711
rpoC2	gene	rna-polymerase	−	16929	21111	4182
rpoC1	gene	rna-polymerase	−	21265	24091	2826
rpoB	gene	rna-polymerase	−	24117	27306	3189
trnC(GCA)	gene	translation-rna	+	28505	28576	71
petN	gene	cytochrome	+	29407	29497	90
psbM	gene	photosystem-ii	−	30407	30512	105
trnD(GUC)	gene	translation-rna	−	31048	31122	74
trnY(GUA)	gene	translation-rna	−	31230	31314	84
trnE(UUC)	gene	translation-rna	−	31373	31446	73
trnT(GGU)	gene	translation-rna	−	32002	32074	72
psbD	gene	photosystem-ii	+	33453	34515	1062
psbC	gene	photosystem-ii	+	34462	35884	1422
trnS(UGA)	gene	translation-rna	−	36125	36218	93
psbZ	gene	photosystem-ii	+	36547	36736	189
trnG(GCC)	gene	translation-rna	+	37011	37082	71
trnfM(CAU)	gene	translation-rna	−	37233	37307	74
rps14	gene	ribosomal-protein	−	37456	37759	303
psaB	gene	photosystem-i	−	37881	40086	2205
psaA	gene	photosystem-i	−	40111	42364	2253
ycf3	gene	other	−	43077	45032	1955
trnS(GGA)	gene	translation-rna	+	45867	45954	87
rps4	gene	ribosomal-protein	−	46234	46840	606
trnT(UGU)	gene	translation-rna	−	47206	47279	73
trnL(UAA)	gene	translation-rna	+	47976	48549	573
trnF(GAA)	gene	translation-rna	+	48890	48963	73
ndhJ	gene	nad-dehydrogenase	−	49610	50087	477
ndhK	gene	nad-dehydrogenase	−	50187	50865	678
ndhC	gene	nad-dehydrogenase	−	50918	51281	363
trnV(UAC)	gene	translation-rna	−	52471	53124	653
trnM(CAU)	gene	translation-rna	+	53305	53378	73
atpE	gene	atp-synthase	−	53585	53987	402
atpB	gene	atp-synthase	−	53983	55480	1497
rbcL	gene	other	+	56265	57705	1440
accD	gene	other	+	58391	59885	1494
psaI	gene	photosystem-i	+	60586	60697	111
ycf4	gene	other	+	61135	61690	555
cemA	gene	other	+	62337	63027	690
petA	gene	cytochrome	+	63216	64179	963
psbJ	gene	photosystem-ii	−	65115	65238	123
psbL	gene	photosystem-ii	−	65371	65488	117
psbF	gene	photosystem-ii	−	65511	65631	120
psbE	gene	photosystem-ii	−	65645	65897	252
petL	gene	cytochrome	+	66827	66923	96
petG	gene	cytochrome	+	67097	67211	114
trnW(CCA)	gene	translation-rna	−	67333	67407	74
trnP(UGG)	gene	translation-rna	−	67569	67643	74
psaJ	gene	photosystem-i	+	68034	68169	135
rpl33	gene	ribosomal-protein	+	68648	68849	201
rps18	gene	ribosomal-protein	+	69019	69325	306
rpl20	gene	ribosomal-protein	−	69560	69947	387
rps12	gene	ribosomal-protein	−	70764	99042	28278
rps12	gene	ribosomal-protein	+	70764	140900	70136
clpP	gene	other	−	71011	72959	1948
psbB	gene	photosystem-ii	+	73420	74947	1527
psbT	gene	photosystem-ii	+	75139	75247	108
psbN	gene	photosystem-ii	−	75307	75439	132
psbH	gene	photosystem-ii	+	75544	75766	222
petB	gene	cytochrome	+	75890	77268	1378
petD	gene	cytochrome	+	77456	78673	1217
rpoA	gene	rna-polymerase	−	78849	79863	1014
rps11	gene	ribosomal-protein	−	79934	80351	417
rpl36	gene	ribosomal-protein	−	80452	80566	114
infA	gene	other	−	80661	80895	234
rps8	gene	ribosomal-protein	−	81019	81424	405
rpl14	gene	ribosomal-protein	−	81596	81965	369
rpl16	gene	ribosomal-protein	−	82091	83388	1297
rps3	gene	ribosomal-protein	−	83530	84193	663
rpl22	gene	ribosomal-protein	−	84202	84640	438
rps19	gene	ribosomal-protein	−	84699	84978	279
rpl2	gene	ribosomal-protein	−	85033	86525	1492
rpl23	gene	ribosomal-protein	−	86543	86825	282
trnH(CAU)	gene	translation-rna	−	86990	87064	74
ycf2	gene	other	+	87162	94023	6861
ycf15	gene	other	+	94104	94353	249
trnL(CAA)	gene	translation-rna	−	94613	94694	81
ndhB	gene	nad-dehydrogenase	−	95241	97453	2212
rps7	gene	ribosomal-protein	−	97727	98195	468
trnV(GAC)	gene	translation-rna	+	100648	100720	72
rrn16	gene	ribosomal-rna	+	100965	102456	1491
trnI(GAU)	gene	translation-rna	+	102754	103775	1021
trnA(UGC)	gene	translation-rna	+	103839	104726	887
rrn23	gene	ribosomal-rna	+	104894	107705	2811
rrn4.5	gene	ribosomal-rna	+	107802	107905	103
rrn5	gene	ribosomal-rna	+	108160	108281	121
trnR(ACG)	gene	translation-rna	+	108524	108598	74
trnN(GUU)	gene	translation-rna	−	109167	109239	72
ycf1	gene	other	+	109568	110654	1086
ndhF	gene	nad-dehydrogenase	−	110656	112900	2244
rpl32	gene	ribosomal-protein	+	113419	113596	177
trnL(UAG)	gene	translation-rna	+	114378	114458	80
ndhD	gene	nad-dehydrogenase	−	115779	117282	1503
psaC	gene	photosystem-i	−	117402	117648	246
ndhE	gene	nad-dehydrogenase	−	117898	118204	306
ndhG	gene	nad-dehydrogenase	−	118417	118948	531
ndhI	gene	nad-dehydrogenase	−	119296	119803	507
ndhA	gene	nad-dehydrogenase	−	119878	122055	2177
ndhH	gene	nad-dehydrogenase	−	122056	123238	1182
rps15	gene	ribosomal-protein	−	123334	123607	273
ycf1	gene	other	−	123988	129580	5592
trnN(GUU)	gene	translation-rna	+	129909	129981	72
trnR(ACG)	gene	translation-rna	−	130551	130624	73
rrn5	gene	ribosomal-rna	−	130867	130988	121
rrn4.5	gene	ribosomal-rna	−	131243	131346	103
rrn23	gene	ribosomal-rna	−	131443	134254	2811
trnA(UGC)	gene	translation-rna	−	134422	135309	887
trnI(GAU)	gene	translation-rna	−	135373	136394	1021
rrn16	gene	ribosomal-rna	−	136692	138183	1491
trnV(GAC)	gene	translation-rna	−	138428	138500	72
rps7	gene	ribosomal-protein	+	140953	141421	468
ndhB	gene	nad-dehydrogenase	+	141695	143907	2212
trnL(CAA)	gene	translation-rna	−	144454	144535	81
ycf15	gene	other	−	144795	145044	249
ycf2	gene	other	−	145125	151986	6861
trnH(CAU)	gene	translation-rna	+	152084	152158	74
rpl23	gene	ribosomal-protein	+	152323	152605	282
rpl2	gene	ribosomal-protein	+	152623	154115	1492
rps19	gene	ribosomal-protein	+	154170	154200	30

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_052748.1DNA · accDNC_052748DNA · atpBNC_052748DNA · matKNC_052748DNA · ndhFNC_052748DNA · psbANC_052748DNA · rbcLNC_052748DNA · rps12NC_052748DNA · ycf1NC_052748