Coordinate-aware organelle record

Callicarpa longipes var. mixiensis chloroplast genome

Available OR537888.1 154,191 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
ycf1	gene	other	−	0	154190	154190
trnN-GUU	gene	translation-rna	+	1400	1472	72
trnR-ACG	gene	translation-rna	−	2041	2115	74
rrn5	gene	ribosomal-rna	−	2358	2479	121
rrn4.5	gene	ribosomal-rna	−	2734	2837	103
rrn23	gene	ribosomal-rna	−	2934	5745	2811
trnA-UGC	gene	translation-rna	−	5905	6800	895
trnI-GAU	gene	translation-rna	−	6864	7885	1021
rrn16	gene	ribosomal-rna	−	8183	9674	1491
trnV-GAC	gene	translation-rna	−	9919	9991	72
rps12	gene	ribosomal-protein	+	11598	96578	84980
rps7	gene	ribosomal-protein	+	12445	12913	468
ndhB	gene	nad-dehydrogenase	+	13187	15399	2212
trnL-CAA	gene	translation-rna	+	15946	16027	81
ycf15	gene	other	−	16287	16536	249
ycf2	gene	other	−	16617	23478	6861
trnI-CAU	gene	translation-rna	+	23576	23650	74
rpl23	gene	ribosomal-protein	+	23815	24097	282
rpl2	gene	ribosomal-protein	+	24115	25607	1492
trnH-GUG	gene	translation-rna	−	25705	25780	75
psbA	gene	photosystem-ii	−	26140	27199	1059
trnK-UUU	gene	translation-rna	−	27452	30024	2572
matK	gene	other	−	27758	29282	1524
rps16	gene	ribosomal-protein	−	30891	32025	1134
trnQ-UUG	gene	translation-rna	−	33180	33252	72
psbK	gene	photosystem-ii	+	33585	33771	186
psbI	gene	photosystem-ii	+	34162	34273	111
trnS-GCU	gene	translation-rna	−	34390	34478	88
trnG-UCC	gene	translation-rna	+	35205	35966	761
trnR-UCU	gene	translation-rna	+	36142	36214	72
atpA	gene	atp-synthase	−	36318	37842	1524
atpF	gene	atp-synthase	−	37909	39156	1247
atpH	gene	atp-synthase	−	39526	39772	246
atpI	gene	atp-synthase	−	40780	41524	744
rps2	gene	ribosomal-protein	−	41754	42465	711
rpoC	gene	rna-polymerase	−	42681	46863	4182
rpoC1	gene	rna-polymerase	−	47017	49849	2832
rpoB	gene	rna-polymerase	−	49875	53088	3213
trnC-GCA	gene	translation-rna	+	54263	54334	71
petN	gene	cytochrome	+	55165	55255	90
psbM	gene	photosystem-ii	−	56164	56269	105
trnD-GUC	gene	translation-rna	−	56790	56864	74
trnY-GUA	gene	translation-rna	−	56972	57056	84
trnE-UUC	gene	translation-rna	−	57115	57188	73
trnT-GGU	gene	translation-rna	+	57744	57816	72
psbD	gene	photosystem-ii	+	59195	60257	1062
psbC	gene	photosystem-ii	+	60204	61626	1422
trnS-UGA	gene	translation-rna	−	61868	61960	92
psbZ	gene	photosystem-ii	+	62289	62478	189
trnG-GCC	gene	translation-rna	+	62753	62824	71
trnfM-CAU	gene	translation-rna	−	62975	63049	74
rps14	gene	ribosomal-protein	−	63198	63501	303
psaB	gene	photosystem-i	−	63623	65828	2205
psaA	gene	photosystem-i	−	65853	68106	2253
ycf3	gene	other	−	68814	70769	1955
trnS-GGA	gene	translation-rna	+	71606	71693	87
rps4	gene	ribosomal-protein	−	71973	72579	606
trnT-UGU	gene	translation-rna	−	72945	73018	73
trnL-UAA	gene	translation-rna	+	73692	74265	573
trnF-GAA	gene	translation-rna	+	74610	74683	73
ndhJ	gene	nad-dehydrogenase	−	75332	75809	477
ndhK	gene	nad-dehydrogenase	−	75909	76587	678
ndhC	gene	nad-dehydrogenase	−	76640	77003	363
trnV-UAC	gene	translation-rna	−	78191	78844	653
trnM-CAU	gene	translation-rna	+	79025	79098	73
atpE	gene	atp-synthase	−	79305	79707	402
atpB	gene	atp-synthase	−	79703	81200	1497
rbcL	gene	other	+	81964	83425	1461
accD	gene	other	+	84091	85585	1494
psaI	gene	photosystem-i	+	86287	86398	111
ycf4	gene	other	+	86837	87392	555
cemA	gene	other	+	88039	88729	690
petA	gene	cytochrome	+	88918	89881	963
psbJ	gene	photosystem-ii	−	90807	90930	123
psbL	gene	photosystem-ii	−	91063	91180	117
psbF	gene	photosystem-ii	−	91203	91323	120
psbE	gene	photosystem-ii	−	91337	91589	252
petL	gene	cytochrome	+	92520	92616	96
petG	gene	cytochrome	+	92790	92904	114
trnW-CCA	gene	translation-rna	−	93026	93100	74
trnP-UGG	gene	translation-rna	−	93261	93335	74
psaJ	gene	photosystem-i	+	93726	93861	135
rpl33	gene	ribosomal-protein	+	94340	94541	201
rps18	gene	ribosomal-protein	+	94711	95017	306
rpl20	gene	ribosomal-protein	−	95251	95638	387
rps12	gene	ribosomal-protein	−	96464	124767	28303
clpP	gene	other	−	96735	98683	1948
psbB	gene	photosystem-ii	+	99137	100664	1527
psbT	gene	photosystem-ii	+	100856	100964	108
psbN	gene	photosystem-ii	−	101024	101156	132
psbH	gene	photosystem-ii	+	101261	101483	222
petB	gene	cytochrome	+	101607	102987	1380
petD	gene	cytochrome	+	103175	104400	1225
rpoA	gene	rna-polymerase	−	104576	105590	1014
rps11	gene	ribosomal-protein	−	105661	106078	417
rpl36	gene	ribosomal-protein	−	106179	106293	114
infA	gene	other	−	106388	106622	234
rps8	gene	ribosomal-protein	−	106746	107151	405
rpl14	gene	ribosomal-protein	−	107322	107691	369
rpl16	gene	ribosomal-protein	−	107817	109113	1296
rps3	gene	ribosomal-protein	−	109255	109918	663
rpl22	gene	ribosomal-protein	−	109927	110365	438
rps19	gene	ribosomal-protein	−	110424	110703	279
rpl2	gene	ribosomal-protein	−	110758	112250	1492
rpl23	gene	ribosomal-protein	−	112268	112550	282
trnI-CAU	gene	translation-rna	−	112715	112789	74
ycf2	gene	other	+	112887	119748	6861
ycf15	gene	other	+	119880	120078	198
trnL-CAA	gene	translation-rna	−	120338	120419	81
ndhB	gene	nad-dehydrogenase	−	120966	123178	2212
rps7	gene	ribosomal-protein	−	123452	123920	468
trnV-GAC	gene	translation-rna	+	126374	126446	72
rrn16	gene	ribosomal-rna	+	126691	128182	1491
trnI-GAU	gene	translation-rna	+	128480	129501	1021
trnA-UGC	gene	translation-rna	+	129565	130452	887
rrn23	gene	ribosomal-rna	+	130620	133429	2809
rrn4.5	gene	ribosomal-rna	+	133528	133631	103
rrn5	gene	ribosomal-rna	+	133886	134007	121
trnR-ACG	gene	translation-rna	+	134250	134324	74
trnN-GUU	gene	translation-rna	−	134893	134965	72
ndhF	gene	nad-dehydrogenase	−	136242	138486	2244
rpl32	gene	ribosomal-protein	+	139005	139182	177
trnL-UAG	gene	translation-rna	+	139963	140043	80
ccsA	gene	other	+	140127	141099	972
ndhD	gene	nad-dehydrogenase	−	141365	142895	1530
psaC	gene	photosystem-i	−	142988	143234	246
ndhE	gene	nad-dehydrogenase	−	143484	143790	306
ndhG	gene	nad-dehydrogenase	−	144003	144534	531
ndhI	gene	nad-dehydrogenase	−	144882	145389	507
ndhA	gene	nad-dehydrogenase	−	145464	147649	2185
ndhH	gene	nad-dehydrogenase	−	147650	148886	1236
rps15	gene	ribosomal-protein	−	148928	149201	273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR537888.1DNA · accDOR537888DNA · atpBOR537888DNA · matKOR537888DNA · ndhFOR537888DNA · psbAOR537888DNA · rbcLOR537888DNA · rps12OR537888DNA · ycf1OR537888