Coordinate-aware organelle record

Callicarpa longipes chloroplast genome

Available OR548044.1 154,195 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
ycf1	gene	other	−	0	154195	154195
trnN-GUU	gene	translation-rna	+	1400	1472	72
trnR-ACG	gene	translation-rna	−	2041	2115	74
rrn5	gene	ribosomal-rna	−	2358	2479	121
rrn4.5	gene	ribosomal-rna	−	2734	2837	103
rrn23	gene	ribosomal-rna	−	2934	5745	2811
trnA-UGC	gene	translation-rna	−	5905	6799	894
trnI-GAU	gene	translation-rna	−	6863	7884	1021
rrn16	gene	ribosomal-rna	−	8182	9673	1491
trnV-GAC	gene	translation-rna	−	9918	9990	72
rps7	gene	ribosomal-protein	+	12444	12912	468
ndhB	gene	nad-dehydrogenase	+	13186	15398	2212
trnL-CAA	gene	translation-rna	+	15945	16026	81
ycf15	gene	other	−	16286	16535	249
ycf2	gene	other	−	16616	23477	6861
trnI-CAU	gene	translation-rna	+	23575	23649	74
rpl23	gene	ribosomal-protein	+	23814	24096	282
rpl2	gene	ribosomal-protein	+	24114	25606	1492
trnH-GUG	gene	translation-rna	−	25704	25779	75
psbA	gene	photosystem-ii	−	26134	27193	1059
trnK-UUU	gene	translation-rna	−	27446	30018	2572
matK	gene	other	−	27752	29276	1524
rps16	gene	ribosomal-protein	−	30884	32015	1131
trnQ-UUG	gene	translation-rna	−	33170	33242	72
psbK	gene	photosystem-ii	+	33571	33757	186
psbI	gene	photosystem-ii	+	34149	34260	111
trnS-GCU	gene	translation-rna	−	34377	34465	88
trnG-UCC	gene	translation-rna	+	35192	35953	761
trnR-UCU	gene	translation-rna	+	36129	36201	72
atpA	gene	atp-synthase	−	36305	37829	1524
atpF	gene	atp-synthase	−	37896	39143	1247
atpH	gene	atp-synthase	−	39513	39759	246
atpI	gene	atp-synthase	−	40767	41511	744
rps2	gene	ribosomal-protein	−	41741	42452	711
rpoC	gene	rna-polymerase	−	42668	46850	4182
rpoC1	gene	rna-polymerase	−	47004	49830	2826
rpoB	gene	rna-polymerase	−	49856	53069	3213
trnC-GCA	gene	translation-rna	+	54244	54315	71
petN	gene	cytochrome	+	55146	55236	90
psbM	gene	photosystem-ii	−	56171	56276	105
trnD-GUC	gene	translation-rna	−	56797	56871	74
trnY-GUA	gene	translation-rna	−	56979	57063	84
trnE-UUC	gene	translation-rna	−	57122	57195	73
trnT-GGU	gene	translation-rna	+	57751	57823	72
psbD	gene	photosystem-ii	+	59202	60264	1062
psbC	gene	photosystem-ii	+	60211	61633	1422
trnS-UGA	gene	translation-rna	−	61874	61967	93
psbZ	gene	photosystem-ii	+	62296	62485	189
trnG-GCC	gene	translation-rna	+	62760	62831	71
trnfM-CAU	gene	translation-rna	−	62982	63056	74
rps14	gene	ribosomal-protein	−	63205	63508	303
psaB	gene	photosystem-i	−	63630	65835	2205
psaA	gene	photosystem-i	−	65860	68113	2253
ycf3	gene	other	−	68821	70776	1955
trnS-GGA	gene	translation-rna	+	71611	71698	87
rps4	gene	ribosomal-protein	−	71978	72584	606
trnT-UGU	gene	translation-rna	−	72949	73022	73
trnL-UAA	gene	translation-rna	+	73696	74269	573
trnF-GAA	gene	translation-rna	+	74614	74687	73
ndhJ	gene	nad-dehydrogenase	−	75336	75813	477
ndhK	gene	nad-dehydrogenase	−	75913	76591	678
ndhC	gene	nad-dehydrogenase	−	76644	77007	363
trnV-UAC	gene	translation-rna	−	78195	78848	653
trnM-CAU	gene	translation-rna	+	79029	79102	73
atpE	gene	atp-synthase	−	79309	79711	402
atpB	gene	atp-synthase	−	79707	81204	1497
rbcL	gene	other	+	81989	83429	1440
accD	gene	other	+	84095	85589	1494
psaI	gene	photosystem-i	+	86291	86402	111
ycf4	gene	other	+	86841	87396	555
cemA	gene	other	+	88043	88733	690
petA	gene	cytochrome	+	88922	89885	963
psbJ	gene	photosystem-ii	−	90811	90934	123
psbL	gene	photosystem-ii	−	91067	91184	117
psbF	gene	photosystem-ii	−	91207	91327	120
psbE	gene	photosystem-ii	−	91341	91593	252
petL	gene	cytochrome	+	92524	92620	96
petG	gene	cytochrome	+	92794	92908	114
trnW-CCA	gene	translation-rna	−	93030	93104	74
trnP-UGG	gene	translation-rna	−	93265	93339	74
psaJ	gene	photosystem-i	+	93730	93865	135
rpl33	gene	ribosomal-protein	+	94344	94545	201
rps18	gene	ribosomal-protein	+	94715	95021	306
rpl20	gene	ribosomal-protein	−	95255	95642	387
rps12	gene	ribosomal-protein	−	96456	124772	28316
clpP	gene	other	−	96740	98689	1949
psbB	gene	photosystem-ii	+	99143	100670	1527
psbT	gene	photosystem-ii	+	100861	100969	108
psbN	gene	photosystem-ii	−	101029	101161	132
psbH	gene	photosystem-ii	+	101266	101488	222
petB	gene	cytochrome	+	101612	102992	1380
petD	gene	cytochrome	+	103180	104405	1225
rpoA	gene	rna-polymerase	−	104581	105595	1014
rps11	gene	ribosomal-protein	−	105666	106083	417
rpl36	gene	ribosomal-protein	−	106184	106298	114
infA	gene	other	−	106393	106627	234
rps8	gene	ribosomal-protein	−	106751	107156	405
rpl14	gene	ribosomal-protein	−	107327	107696	369
rpl16	gene	ribosomal-protein	−	107822	109118	1296
rps3	gene	ribosomal-protein	−	109260	109923	663
rpl22	gene	ribosomal-protein	−	109932	110370	438
rps19	gene	ribosomal-protein	−	110429	110708	279
rpl2	gene	ribosomal-protein	−	110763	112255	1492
rpl23	gene	ribosomal-protein	−	112273	112555	282
trnI-CAU	gene	translation-rna	−	112720	112794	74
ycf2	gene	other	+	112892	119753	6861
ycf15	gene	other	+	119885	120083	198
trnL-CAA	gene	translation-rna	−	120343	120424	81
ndhB	gene	nad-dehydrogenase	−	120971	123183	2212
rps7	gene	ribosomal-protein	−	123457	123925	468
trnV-GAC	gene	translation-rna	+	126379	126451	72
rrn16	gene	ribosomal-rna	+	126696	128187	1491
trnI-GAU	gene	translation-rna	+	128485	129506	1021
trnA-UGC	gene	translation-rna	+	129570	130456	886
rrn23	gene	ribosomal-rna	+	130624	133433	2809
rrn4.5	gene	ribosomal-rna	+	133532	133635	103
rrn5	gene	ribosomal-rna	+	133890	134011	121
trnR-ACG	gene	translation-rna	+	134254	134328	74
trnN-GUU	gene	translation-rna	−	134897	134969	72
ndhF	gene	nad-dehydrogenase	−	136373	138617	2244
rpl32	gene	ribosomal-protein	+	139135	139312	177
trnL-UAG	gene	translation-rna	+	140094	140174	80
ccsA	gene	other	+	140258	141230	972
ndhD	gene	nad-dehydrogenase	−	141496	143026	1530
psaC	gene	photosystem-i	−	143119	143365	246
ndhE	gene	nad-dehydrogenase	−	143615	143921	306
ndhG	gene	nad-dehydrogenase	−	144134	144665	531
ndhI	gene	nad-dehydrogenase	−	145013	145520	507
ndhA	gene	nad-dehydrogenase	−	145595	147780	2185
ndhH	gene	nad-dehydrogenase	−	147781	149017	1236
rps15	gene	ribosomal-protein	−	149059	149332	273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR548044.1DNA · accDOR548044DNA · atpBOR548044DNA · matKOR548044DNA · ndhFOR548044DNA · psbAOR548044DNA · rbcLOR548044DNA · rps12OR548044DNA · ycf1OR548044