Coordinate-aware organelle record

Callicarpa macrophylla chloroplast genome

Available NC_058323.1 154,149 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	432	1491	1059
trnK-UUU	gene	translation-rna	−	1744	4316	2572
matK	gene	other	−	2050	3574	1524
rps16	gene	ribosomal-protein	−	5178	6312	1134
trnQ-UUG	gene	translation-rna	−	7453	7525	72
psbK	gene	photosystem-ii	+	7849	8044	195
psbI	gene	photosystem-ii	+	8434	8545	111
trnS-GCU	gene	translation-rna	−	8661	8749	88
trnG-UCC	gene	translation-rna	+	9456	10217	761
trnR-UCU	gene	translation-rna	+	10393	10465	72
atpA	gene	atp-synthase	−	10569	12093	1524
atpF	gene	atp-synthase	−	12160	13407	1247
atpH	gene	atp-synthase	−	13775	14021	246
atpI	gene	atp-synthase	−	15035	15779	744
rps2	gene	ribosomal-protein	−	16009	16720	711
rpoC	gene	rna-polymerase	−	16936	21118	4182
rpoC1	gene	rna-polymerase	−	21272	24098	2826
rpoB	gene	rna-polymerase	−	24124	27313	3189
trnC-GCA	gene	translation-rna	+	28512	28583	71
petN	gene	cytochrome	+	29414	29504	90
psbM	gene	photosystem-ii	−	30403	30508	105
trnD-GUC	gene	translation-rna	−	31044	31118	74
trnY-GUA	gene	translation-rna	−	31226	31310	84
trnE-UUC	gene	translation-rna	−	31369	31442	73
trnT-GGU	gene	translation-rna	+	31998	32070	72
psbD	gene	photosystem-ii	+	33449	34511	1062
psbC	gene	photosystem-ii	+	34458	35880	1422
trnS-UGA	gene	translation-rna	−	36121	36214	93
psbZ	gene	photosystem-ii	+	36543	36732	189
trnG-GCC	gene	translation-rna	+	37007	37078	71
trnfM-CAU	gene	translation-rna	−	37229	37303	74
rps14	gene	ribosomal-protein	−	37452	37755	303
psaB	gene	photosystem-i	−	37878	40083	2205
psaA	gene	photosystem-i	−	40108	42361	2253
ycf3	gene	other	−	43075	45029	1954
trnS-GGA	gene	translation-rna	+	45863	45950	87
rps4	gene	ribosomal-protein	−	46230	46836	606
trnT-UGU	gene	translation-rna	−	47203	47276	73
trnL-UAA	gene	translation-rna	+	47948	48526	578
trnF-GAA	gene	translation-rna	+	48862	48945	83
ndhJ	gene	nad-dehydrogenase	−	49585	50062	477
ndhK	gene	nad-dehydrogenase	−	50162	50840	678
ndhC	gene	nad-dehydrogenase	−	50893	51256	363
trnV-UAC	gene	translation-rna	−	52439	53092	653
trnM-CAU	gene	translation-rna	+	53273	53346	73
atpE	gene	atp-synthase	−	53553	53955	402
atpB	gene	atp-synthase	−	53951	55454	1503
rbcL	gene	other	+	56232	57672	1440
accD	gene	other	+	58306	59851	1545
psaI	gene	photosystem-i	+	60552	60663	111
ycf4	gene	other	+	61101	61656	555
cemA	gene	other	+	62303	62993	690
petA	gene	cytochrome	+	63182	64145	963
psbJ	gene	photosystem-ii	−	65082	65205	123
psbL	gene	photosystem-ii	−	65338	65455	117
psbF	gene	photosystem-ii	−	65478	65598	120
psbE	gene	photosystem-ii	−	65612	65864	252
petL	gene	cytochrome	+	66796	66892	96
petG	gene	cytochrome	+	67067	67181	114
trnW-CCA	gene	translation-rna	−	67303	67377	74
trnP-UGG	gene	translation-rna	−	67539	67613	74
psaJ	gene	photosystem-i	+	68004	68139	135
rpl33	gene	ribosomal-protein	+	68618	68819	201
rps18	gene	ribosomal-protein	+	68989	69295	306
rpl20	gene	ribosomal-protein	−	69530	69917	387
rps12	gene	ribosomal-protein	−	70736	99012	28276
rps12	gene	ribosomal-protein	+	70736	140839	70103
clpP	gene	other	−	70982	72930	1948
psbB	gene	photosystem-ii	+	73391	74918	1527
psbT	gene	photosystem-ii	+	75110	75218	108
psbN	gene	photosystem-ii	−	75278	75410	132
psbH	gene	photosystem-ii	+	75497	75737	240
petB	gene	cytochrome	+	75861	77238	1377
petD	gene	cytochrome	+	77426	78643	1217
rpoA	gene	rna-polymerase	−	78819	79833	1014
rps11	gene	ribosomal-protein	−	79904	80321	417
rpl36	gene	ribosomal-protein	−	80422	80536	114
infA	gene	other	−	80631	80865	234
rps8	gene	ribosomal-protein	−	80989	81394	405
rpl14	gene	ribosomal-protein	−	81566	81935	369
rpl16	gene	ribosomal-protein	−	82061	83358	1297
rps3	gene	ribosomal-protein	−	83500	84163	663
rpl22	gene	ribosomal-protein	−	84172	84610	438
rps19	gene	ribosomal-protein	−	84669	84948	279
rpl2	gene	ribosomal-protein	−	85003	86495	1492
rpl23	gene	ribosomal-protein	−	86513	86795	282
trnI-CAU	gene	translation-rna	−	86960	87034	74
ycf2	gene	other	+	87132	93993	6861
ycf15	gene	other	+	94074	94323	249
trnL-CAA	gene	translation-rna	−	94583	94664	81
ndhB	CDS	nad-dehydrogenase	−	95211	97423	2212
ndhB	gene	nad-dehydrogenase	−	95211	97424	2213
rps7	gene	ribosomal-protein	−	97697	98165	468
trnV-GAC	gene	translation-rna	+	100618	100690	72
rrn16	gene	ribosomal-rna	+	100935	102426	1491
trnI-GAU	gene	translation-rna	+	102724	103745	1021
trnA-UGC	gene	translation-rna	+	103809	104696	887
rrn23	gene	ribosomal-rna	+	104864	107675	2811
rrn4.5	gene	ribosomal-rna	+	107772	107875	103
rrn5	gene	ribosomal-rna	+	108130	108251	121
trnR-ACG	gene	translation-rna	+	108494	108568	74
trnN-GUU	gene	translation-rna	−	109137	109209	72
ycf1	gene	other	+	109538	110624	1086
ndhF	gene	nad-dehydrogenase	−	110613	112857	2244
rpl32	gene	ribosomal-protein	+	113375	113552	177
trnL-UAG; trnL-CAA	gene	translation-rna	+	114334	114414	80
ccsA	gene	other	+	114498	115470	972
ndhD	gene	nad-dehydrogenase	−	115736	117272	1536
psaC	gene	photosystem-i	−	117359	117605	246
ndhE	gene	nad-dehydrogenase	−	117855	118161	306
ndhG	gene	nad-dehydrogenase	−	118374	118905	531
ndhI	gene	nad-dehydrogenase	−	119253	119760	507
ndhA	gene	nad-dehydrogenase	−	119835	122021	2186
ndhH	gene	nad-dehydrogenase	−	122022	123204	1182
rps15	gene	ribosomal-protein	−	123300	123573	273
ycf1	gene	other	−	123954	129630	5676
trnN-GUU	gene	translation-rna	+	129848	129920	72
trnR-ACG	gene	translation-rna	−	130489	130563	74
rrn5	gene	ribosomal-rna	−	130806	130927	121
rrn4.5	gene	ribosomal-rna	−	131182	131285	103
rrn23	gene	ribosomal-rna	−	131382	134193	2811
trnA-UGC	gene	translation-rna	−	134361	135248	887
trnI-GAU	gene	translation-rna	−	135312	136333	1021
rrn16	gene	ribosomal-rna	−	136631	138122	1491
trnV-GAC	gene	translation-rna	−	138367	138439	72
rps7	gene	ribosomal-protein	+	140892	141360	468
ndhB	gene	nad-dehydrogenase	+	141634	143846	2212
trnL-CAA	gene	translation-rna	+	144393	144474	81
ycf15	gene	other	−	144734	144983	249
ycf2	gene	other	−	145064	151925	6861
trnI-CAU	gene	translation-rna	+	152023	152097	74
rpl23	gene	ribosomal-protein	+	152262	152544	282
rpl2	gene	ribosomal-protein	+	152562	154054	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_058323.1DNA · accDNC_058323DNA · atpBNC_058323DNA · matKNC_058323DNA · ndhFNC_058323DNA · psbANC_058323DNA · rbcLNC_058323DNA · rps12NC_058323DNA · ycf1NC_058323