Coordinate-aware organelle record

Callicarpa rubella f. angustata chloroplast genome

Available OR537890.1 154,138 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
ycf1	gene	other	−	0	154138	154138
trnN-GUU	gene	translation-rna	+	1400	1472	72
trnR-ACG	gene	translation-rna	−	2041	2115	74
rrn5	gene	ribosomal-rna	−	2358	2479	121
rrn4.5	gene	ribosomal-rna	−	2734	2837	103
rrn23	gene	ribosomal-rna	−	2934	5745	2811
trnA-UGC	gene	translation-rna	−	5913	6800	887
trnI-GAU	gene	translation-rna	−	6864	7885	1021
rrn16	gene	ribosomal-rna	−	8183	9674	1491
trnV-GAC	gene	translation-rna	−	9919	9991	72
rps12	gene	ribosomal-protein	+	11598	96548	84950
rps7	gene	ribosomal-protein	+	12445	12913	468
ndhB	gene	nad-dehydrogenase	+	13187	15399	2212
trnL-CAA	gene	translation-rna	+	15946	16027	81
ycf15	gene	other	−	16287	16536	249
ycf2	gene	other	−	16617	23478	6861
trnI-CAU	gene	translation-rna	+	23576	23650	74
rpl23	gene	ribosomal-protein	+	23815	24097	282
rpl2	gene	ribosomal-protein	+	24115	25607	1492
trnH-GUG	gene	translation-rna	−	25705	25780	75
psbA	gene	photosystem-ii	−	26108	27167	1059
trnK-UUU	gene	translation-rna	−	27420	29992	2572
matK	gene	other	−	27726	29250	1524
rps16	gene	ribosomal-protein	−	30856	31990	1134
trnQ-UUG	gene	translation-rna	−	33147	33219	72
psbK	gene	photosystem-ii	+	33552	33738	186
psbI	gene	photosystem-ii	+	34129	34240	111
trnS-GCU	gene	translation-rna	−	34359	34447	88
trnG-UCC	gene	translation-rna	+	35154	35915	761
trnR-UCU	gene	translation-rna	+	36091	36163	72
atpA	gene	atp-synthase	−	36267	37791	1524
atpF	gene	atp-synthase	−	37858	39105	1247
atpH	gene	atp-synthase	−	39476	39722	246
atpI	gene	atp-synthase	−	40730	41474	744
rps2	gene	ribosomal-protein	−	41704	42415	711
rpoC	gene	rna-polymerase	−	42631	46813	4182
rpoC1	gene	rna-polymerase	−	46967	49793	2826
rpoB	gene	rna-polymerase	−	49819	53032	3213
trnC-GCA	gene	translation-rna	+	54207	54278	71
petN	gene	cytochrome	+	55109	55199	90
psbM	gene	photosystem-ii	−	56109	56214	105
trnD-GUC	gene	translation-rna	−	56750	56824	74
trnY-GUA	gene	translation-rna	−	56932	57016	84
trnE-TTC	gene	translation-rna	−	57075	57148	73
trnT-GGU	gene	translation-rna	+	57704	57776	72
psbD	gene	photosystem-ii	+	59155	60217	1062
psbC	gene	photosystem-ii	+	60164	61586	1422
trnS-UGA	gene	translation-rna	−	61827	61920	93
psbZ	gene	photosystem-ii	+	62249	62438	189
trnG-GCC	gene	translation-rna	+	62713	62784	71
trnfM-CAU	gene	translation-rna	−	62935	63009	74
rps14	gene	ribosomal-protein	−	63158	63461	303
psaB	gene	photosystem-i	−	63583	65788	2205
psaA	gene	photosystem-i	−	65813	68066	2253
ycf3	gene	other	−	68780	70735	1955
trnS-GGA	gene	translation-rna	+	71586	71673	87
rps4	gene	ribosomal-protein	−	71953	72559	606
trnT-UGU	gene	translation-rna	−	72922	72995	73
trnL-UAA	gene	translation-rna	+	73668	74241	573
trnF-GAA	gene	translation-rna	+	74582	74655	73
ndhJ	gene	nad-dehydrogenase	−	75304	75781	477
ndhK	gene	nad-dehydrogenase	−	75881	76559	678
ndhC	gene	nad-dehydrogenase	−	76612	76975	363
trnV-UAC	gene	translation-rna	−	78163	78817	654
trnM-CAU	gene	translation-rna	+	78998	79071	73
atpE	gene	atp-synthase	−	79278	79680	402
atpB	gene	atp-synthase	−	79676	81173	1497
rbcL	gene	other	+	81937	83398	1461
accD	gene	other	+	84083	85577	1494
psaI	gene	photosystem-i	+	86270	86381	111
ycf4	gene	other	+	86820	87375	555
cemA	gene	other	+	88022	88712	690
petA	gene	cytochrome	+	88901	89864	963
psbJ	gene	photosystem-ii	−	90790	90913	123
psbL	gene	photosystem-ii	−	91046	91163	117
psbF	gene	photosystem-ii	−	91186	91306	120
psbE	gene	photosystem-ii	−	91320	91572	252
petL	gene	cytochrome	+	92495	92591	96
petG	gene	cytochrome	+	92765	92879	114
trnW-CCA	gene	translation-rna	−	93001	93075	74
trnP-UGG	gene	translation-rna	−	93236	93310	74
psaJ	gene	photosystem-i	+	93701	93836	135
rpl33	gene	ribosomal-protein	+	94315	94516	201
rps18	gene	ribosomal-protein	+	94686	94992	306
rpl20	gene	ribosomal-protein	−	95225	95612	387
rps12	gene	ribosomal-protein	−	96434	124712	28278
clpP	gene	other	−	96681	98630	1949
psbB	gene	photosystem-ii	+	99091	100618	1527
psbT	gene	photosystem-ii	+	100810	100918	108
psbN	gene	photosystem-ii	−	100978	101110	132
psbH	gene	photosystem-ii	+	101215	101437	222
petB	gene	cytochrome	+	101561	102941	1380
petD	gene	cytochrome	+	103129	104346	1217
rpoA	gene	rna-polymerase	−	104522	105536	1014
rps11	gene	ribosomal-protein	−	105607	106024	417
rpl36	gene	ribosomal-protein	−	106125	106239	114
infA	gene	other	−	106334	106568	234
rps8	gene	ribosomal-protein	−	106692	107097	405
rpl14	gene	ribosomal-protein	−	107267	107636	369
rpl16	gene	ribosomal-protein	−	107762	109058	1296
rps3	gene	ribosomal-protein	−	109200	109863	663
rpl22	gene	ribosomal-protein	−	109872	110310	438
rps19	gene	ribosomal-protein	−	110369	110648	279
rpl2	gene	ribosomal-protein	−	110703	112195	1492
rpl23	gene	ribosomal-protein	−	112213	112495	282
trnI-CAU	gene	translation-rna	−	112660	112734	74
ycf2	gene	other	+	112832	119693	6861
ycf15	gene	other	+	119825	120023	198
trnL-CAA	gene	translation-rna	−	120283	120364	81
ndhB	gene	nad-dehydrogenase	−	120911	123123	2212
rps7	gene	ribosomal-protein	−	123397	123865	468
trnV-GAC	gene	translation-rna	+	126319	126391	72
rrn16	gene	ribosomal-rna	+	126636	128127	1491
trnI-GAU	gene	translation-rna	+	128425	129446	1021
trnA-UGC	gene	translation-rna	+	129510	130397	887
rrn23	gene	ribosomal-rna	+	130565	133376	2811
rrn4.5	gene	ribosomal-rna	+	133473	133576	103
rrn5	gene	ribosomal-rna	+	133831	133952	121
trnR-ACG	gene	translation-rna	+	134195	134269	74
trnN-GUU	gene	translation-rna	−	134838	134910	72
ndhF	gene	nad-dehydrogenase	−	136314	138558	2244
rpl32	gene	ribosomal-protein	+	139076	139253	177
trnL-UAG	gene	translation-rna	+	140034	140114	80
ccsA	gene	other	+	140198	141170	972
ndhD	gene	nad-dehydrogenase	−	141436	142966	1530
psaC	gene	photosystem-i	−	143059	143305	246
ndhE	gene	nad-dehydrogenase	−	143555	143861	306
ndhG	gene	nad-dehydrogenase	−	144077	144608	531
ndhI	gene	nad-dehydrogenase	−	144957	145464	507
ndhA	gene	nad-dehydrogenase	−	145539	147724	2185
ndhH	gene	nad-dehydrogenase	−	147725	148961	1236
rps15	gene	ribosomal-protein	−	149003	149276	273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR537890.1DNA · accDOR537890DNA · atpBOR537890DNA · matKOR537890DNA · ndhFOR537890DNA · psbAOR537890DNA · rbcLOR537890DNA · rps12OR537890DNA · ycf1OR537890