Coordinate-aware organelle record

Callicarpa rubella f. subglabra chloroplast genome

Available OR537889.1 154,126 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
ycf1	gene	other	−	0	154126	154126
trnN-GUU	gene	translation-rna	+	1400	1472	72
trnR-ACG	gene	translation-rna	−	2041	2115	74
rrn5	gene	ribosomal-rna	−	2358	2479	121
rrn4.5	gene	ribosomal-rna	−	2734	2837	103
rrn23	gene	ribosomal-rna	−	2934	5745	2811
trnA-UGC	gene	translation-rna	−	5913	6799	886
trnI-GAU	gene	translation-rna	−	6863	7884	1021
rrn16	gene	ribosomal-rna	−	8182	9673	1491
trnV-GAC	gene	translation-rna	−	9918	9990	72
rps7	gene	ribosomal-protein	+	12444	12912	468
ndhB	gene	nad-dehydrogenase	+	13186	15398	2212
trnL-CAA	gene	translation-rna	+	15945	16026	81
ycf15	gene	other	−	16286	16535	249
ycf2	gene	other	−	16616	23477	6861
trnI-CAU	gene	translation-rna	+	23575	23649	74
rpl23	gene	ribosomal-protein	+	23814	24096	282
rpl2	gene	ribosomal-protein	+	24114	25606	1492
trnH-GUG	gene	translation-rna	−	25704	25779	75
psbA	gene	photosystem-ii	−	26128	27187	1059
trnK-UUU	gene	translation-rna	−	27440	30012	2572
matK	gene	other	−	27746	29270	1524
rps16	gene	ribosomal-protein	−	30877	32011	1134
trnQ-UUG	gene	translation-rna	−	33149	33221	72
psbK	gene	photosystem-ii	+	33554	33740	186
psbI	gene	photosystem-ii	+	34131	34242	111
trnS-GCU	gene	translation-rna	−	34359	34447	88
trnG-UCC	gene	translation-rna	+	35154	35915	761
trnR-UCU	gene	translation-rna	+	36091	36163	72
atpA	gene	atp-synthase	−	36267	37791	1524
atpF	gene	atp-synthase	−	37858	39106	1248
atpH	gene	atp-synthase	−	39475	39721	246
atpI	gene	atp-synthase	−	40729	41473	744
rps2	gene	ribosomal-protein	−	41703	42414	711
rpoC	gene	rna-polymerase	−	42630	46812	4182
rpoC1	gene	rna-polymerase	−	46966	49792	2826
rpoB	gene	rna-polymerase	−	49818	53031	3213
trnC-GCA	gene	translation-rna	+	54206	54277	71
petN	gene	cytochrome	+	55108	55198	90
psbM	gene	photosystem-ii	−	56120	56225	105
trnD-GUC	gene	translation-rna	−	56746	56820	74
trnY-GUA	gene	translation-rna	−	56928	57012	84
trnE-UUC	gene	translation-rna	−	57071	57144	73
trnT-GGU	gene	translation-rna	+	57700	57772	72
psbD	gene	photosystem-ii	+	59151	60213	1062
psbC	gene	photosystem-ii	+	60160	61582	1422
trnS-UGA	gene	translation-rna	−	61823	61916	93
psbZ	gene	photosystem-ii	+	62245	62434	189
trnG-GCC	gene	translation-rna	+	62709	62780	71
trnfM-CAU	gene	translation-rna	−	62931	63005	74
rps14	gene	ribosomal-protein	−	63154	63457	303
psaB	gene	photosystem-i	−	63579	65784	2205
psaA	gene	photosystem-i	−	65809	68062	2253
ycf3	gene	other	−	68770	70725	1955
trnS-GGA	gene	translation-rna	+	71559	71646	87
rps4	gene	ribosomal-protein	−	71926	72532	606
trnT-TGT	gene	translation-rna	−	72898	72971	73
trnL-UAA	gene	translation-rna	+	73640	74213	573
trnF-GAA	gene	translation-rna	+	74558	74631	73
ndhJ	gene	nad-dehydrogenase	−	75280	75757	477
ndhK	gene	nad-dehydrogenase	−	75857	76535	678
ndhC	gene	nad-dehydrogenase	−	76588	76951	363
trnV-UAC	gene	translation-rna	−	78139	78792	653
trnM-CAU	gene	translation-rna	+	78973	79046	73
atpE	gene	atp-synthase	−	79253	79655	402
atpB	gene	atp-synthase	−	79651	81148	1497
rbcL	gene	other	+	81912	83373	1461
accD	gene	other	+	84039	85533	1494
psaI	gene	photosystem-i	+	86235	86346	111
ycf4	gene	other	+	86785	87340	555
cemA	gene	other	+	87987	88677	690
petA	gene	cytochrome	+	88866	89829	963
psbJ	gene	photosystem-ii	−	90755	90878	123
psbL	gene	photosystem-ii	−	91011	91128	117
psbF	gene	photosystem-ii	−	91151	91271	120
psbE	gene	photosystem-ii	−	91285	91537	252
petL	gene	cytochrome	+	92469	92565	96
petG	gene	cytochrome	+	92739	92853	114
trnW-CCA	gene	translation-rna	−	92975	93049	74
trnP-UGG	gene	translation-rna	−	93210	93284	74
psaJ	gene	photosystem-i	+	93675	93810	135
rpl33	gene	ribosomal-protein	+	94289	94490	201
rps18	gene	ribosomal-protein	+	94660	94966	306
rpl20	gene	ribosomal-protein	−	95200	95587	387
rps12	gene	ribosomal-protein	−	96413	124723	28310
clpP	gene	other	−	96684	98633	1949
psbB	gene	photosystem-ii	+	99087	100614	1527
psbT	gene	photosystem-ii	+	100806	100914	108
psbN	gene	photosystem-ii	−	100974	101106	132
psbH	gene	photosystem-ii	+	101211	101433	222
petB	gene	cytochrome	+	101557	102937	1380
petD	gene	cytochrome	+	103125	104350	1225
rpoA	gene	rna-polymerase	−	104526	105540	1014
rps11	gene	ribosomal-protein	−	105611	106028	417
rpl36	gene	ribosomal-protein	−	106129	106243	114
infA	gene	other	−	106338	106572	234
rps8	gene	ribosomal-protein	−	106696	107101	405
rpl14	gene	ribosomal-protein	−	107272	107641	369
rpl16	gene	ribosomal-protein	−	107767	109069	1302
rps3	gene	ribosomal-protein	−	109211	109874	663
rpl22	gene	ribosomal-protein	−	109883	110321	438
rps19	gene	ribosomal-protein	−	110380	110659	279
rpl2	gene	ribosomal-protein	−	110714	112206	1492
rpl23	gene	ribosomal-protein	−	112224	112506	282
trnI-CAU	gene	translation-rna	−	112671	112745	74
ycf2	gene	other	+	112843	119704	6861
ycf15	gene	other	+	119836	120034	198
trnL-CAA	gene	translation-rna	−	120294	120375	81
ndhB	gene	nad-dehydrogenase	−	120922	123134	2212
rps7	gene	ribosomal-protein	−	123408	123876	468
trnV-GAC	gene	translation-rna	+	126330	126402	72
rrn16	gene	ribosomal-rna	+	126647	128138	1491
trnI-GAU	gene	translation-rna	+	128436	129457	1021
trnA-UGC	gene	translation-rna	+	129521	130407	886
rrn23	gene	ribosomal-rna	+	130575	133386	2811
rrn4.5	gene	ribosomal-rna	+	133483	133586	103
rrn5	gene	ribosomal-rna	+	133841	133962	121
trnR-ACG	gene	translation-rna	+	134205	134279	74
trnN-GUU	gene	translation-rna	−	134848	134920	72
ndhF	gene	nad-dehydrogenase	−	136324	138568	2244
rpl32	gene	ribosomal-protein	+	139086	139263	177
trnL-UAG	gene	translation-rna	+	140044	140124	80
ccsA	gene	other	+	140208	141180	972
ndhD	gene	nad-dehydrogenase	−	141446	142976	1530
psaC	gene	photosystem-i	−	143069	143315	246
ndhE	gene	nad-dehydrogenase	−	143545	143851	306
ndhG	gene	nad-dehydrogenase	−	144064	144595	531
ndhI	gene	nad-dehydrogenase	−	144944	145451	507
ndhA	gene	nad-dehydrogenase	−	145526	147711	2185
ndhH	gene	nad-dehydrogenase	−	147712	148948	1236
rps15	gene	ribosomal-protein	−	148990	149263	273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR537889.1DNA · accDOR537889DNA · atpBOR537889DNA · matKOR537889DNA · ndhFOR537889DNA · psbAOR537889DNA · rbcLOR537889DNA · rps12OR537889DNA · ycf1OR537889