Caryopteris forrestii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_058325.1 · 2–75 bp · −
psbA · NC_058325.1 · 328–1,386 bp · −
trnK-UUU · NC_058325.1 · 1,619–4,194 bp · −
matK · NC_058325.1 · 1,920–3,455 bp · −
rps16 · NC_058325.1 · 5,057–6,220 bp · −
trnQ-UUG · NC_058325.1 · 7,454–7,525 bp · −
trnS-GCU · NC_058325.1 · 8,484–8,571 bp · −
atpA · NC_058325.1 · 10,308–11,831 bp · −
atpF · NC_058325.1 · 11,933–13,173 bp · −
atpH · NC_058325.1 · 13,548–13,793 bp · −
atpI · NC_058325.1 · 14,805–15,548 bp · −
rps2 · NC_058325.1 · 15,781–16,491 bp · −
rpoC2 · NC_058325.1 · 16,717–20,826 bp · −
rpoC1 · NC_058325.1 · 20,993–23,820 bp · −
rpoB · NC_058325.1 · 23,847–27,059 bp · −
psbM · NC_058325.1 · 29,747–29,851 bp · −
trnD-GUC · NC_058325.1 · 30,375–30,448 bp · −
trnY-GUA · NC_058325.1 · 30,556–30,639 bp · −
trnE-UUC · NC_058325.1 · 30,699–30,771 bp · −
trnS-UGA · NC_058325.1 · 35,428–35,520 bp · −
trnfM-CAU · NC_058325.1 · 36,562–36,635 bp · −
rps14 · NC_058325.1 · 36,780–37,082 bp · −
psaB · NC_058325.1 · 37,206–39,410 bp · −
psaA · NC_058325.1 · 39,436–41,688 bp · −
ycf3 · NC_058325.1 · 42,405–44,338 bp · −
rps4 · NC_058325.1 · 45,137–45,739 bp · −
trnT-UGU · NC_058325.1 · 46,101–46,173 bp · −
ndhJ · NC_058325.1 · 48,477–48,971 bp · −
ndhK · NC_058325.1 · 49,054–49,905 bp · −
ndhC · NC_058325.1 · 49,785–50,147 bp · −
trnV-UAC · NC_058325.1 · 51,011–51,674 bp · −
atpE · NC_058325.1 · 52,053–52,475 bp · −
atpB · NC_058325.1 · 52,472–53,968 bp · −
psbJ · NC_058325.1 · 63,592–63,714 bp · −
psbL · NC_058325.1 · 63,856–63,972 bp · −
psbF · NC_058325.1 · 63,996–64,115 bp · −
psbE · NC_058325.1 · 64,130–64,381 bp · −
trnW-CCA · NC_058325.1 · 65,787–65,860 bp · −
trnP-UGG · NC_058325.1 · 66,047–66,120 bp · −
rpl20 · NC_058325.1 · 67,908–68,294 bp · −
rps12 · NC_058325.1 · 69,109–69,222 bp · −
rps12 · NC_058325.1 · 96,512–97,308 bp · −
clpP · NC_058325.1 · 69,365–71,284 bp · −
psbN · NC_058325.1 · 73,618–73,749 bp · −
rpoA · NC_058325.1 · 77,136–78,155 bp · −
rps11 · NC_058325.1 · 78,227–78,643 bp · −
rpl36 · NC_058325.1 · 78,746–78,859 bp · −
infA · NC_058325.1 · 78,955–79,188 bp · −
rps8 · NC_058325.1 · 79,313–79,717 bp · −
rpl14 · NC_058325.1 · 79,893–80,261 bp · −
rpl16 · NC_058325.1 · 80,388–81,665 bp · −
rps3 · NC_058325.1 · 81,823–82,473 bp · −
rpl22 · NC_058325.1 · 82,458–82,925 bp · −
rps19 · NC_058325.1 · 82,981–83,259 bp · −
rpl2 · NC_058325.1 · 83,313–84,804 bp · −
rpl23 · NC_058325.1 · 84,823–85,104 bp · −
trnI-CAU · NC_058325.1 · 85,270–85,343 bp · −
trnL-CAA · NC_058325.1 · 92,878–92,958 bp · −
ndhB · NC_058325.1 · 93,505–95,716 bp · −
rps7 · NC_058325.1 · 95,991–96,458 bp · −
trnN-GUU · NC_058325.1 · 107,387–107,458 bp · −
ndhF · NC_058325.1 · 108,798–111,089 bp · −
ndhD · NC_058325.1 · 113,597–115,126 bp · −
psaC · NC_058325.1 · 115,218–115,463 bp · −
ndhE · NC_058325.1 · 115,689–115,994 bp · −
ndhG · NC_058325.1 · 116,203–116,733 bp · −
ndhI · NC_058325.1 · 117,060–117,566 bp · −
ndhA · NC_058325.1 · 117,642–119,646 bp · −
ndhH · NC_058325.1 · 119,648–120,883 bp · −
rps15 · NC_058325.1 · 120,926–121,198 bp · −
ycf1 · NC_058325.1 · 121,586–127,276 bp · −
trnR-ACG · NC_058325.1 · 128,149–128,222 bp · −
rrn5 · NC_058325.1 · 128,467–128,587 bp · −
rrn4.5 · NC_058325.1 · 128,817–128,919 bp · −
rrn23 · NC_058325.1 · 129,020–131,836 bp · −
trnA-UGC · NC_058325.1 · 131,998–132,879 bp · −
trnI-GAU · NC_058325.1 · 132,944–133,964 bp · −
rrn16 · NC_058325.1 · 134,263–135,753 bp · −
trnV-GAC · NC_058325.1 · 135,981–136,052 bp · −
ycf15 · NC_058325.1 · 142,343–142,591 bp · −
ycf2 · NC_058325.1 · 142,682–149,521 bp · −
psbK · NC_058325.1 · 7,846–8,040 bp · +
psbI · NC_058325.1 · 8,253–8,363 bp · +
trnG-UCC · NC_058325.1 · 9,234–9,989 bp · +
trnR-UCU · NC_058325.1 · 10,128–10,199 bp · +
trnC-GCA · NC_058325.1 · 28,212–28,282 bp · +
petN · NC_058325.1 · 29,014–29,103 bp · +
trnT-GGU · NC_058325.1 · 31,348–31,419 bp · +
psbD · NC_058325.1 · 32,744–33,805 bp · +
psbC · NC_058325.1 · 33,753–35,174 bp · +
psbZ · NC_058325.1 · 35,756–36,028 bp · +
trnG-GCC · NC_058325.1 · 36,327–36,397 bp · +
trnS-GGA · NC_058325.1 · 44,749–44,835 bp · +
trnL-UAA · NC_058325.1 · 46,871–47,444 bp · +
trnF-GAA · NC_058325.1 · 47,744–47,816 bp · +
trnM-CAU · NC_058325.1 · 51,855–51,927 bp · +
rbcL · NC_058325.1 · 54,724–56,193 bp · +
accD · NC_058325.1 · 56,799–58,337 bp · +
psaI · NC_058325.1 · 59,049–59,159 bp · +
ycf4 · NC_058325.1 · 59,569–60,123 bp · +
cemA · NC_058325.1 · 60,769–61,458 bp · +
petA · NC_058325.1 · 61,671–62,633 bp · +
petL · NC_058325.1 · 65,281–65,376 bp · +
petG · NC_058325.1 · 65,551–65,664 bp · +
psaJ · NC_058325.1 · 66,409–66,543 bp · +
rpl33 · NC_058325.1 · 67,000–67,200 bp · +
rps18 · NC_058325.1 · 67,366–67,671 bp · +
rps12 · NC_058325.1 · 137,645–138,441 bp · +
psbB · NC_058325.1 · 71,730–73,256 bp · +
psbT · NC_058325.1 · 73,450–73,557 bp · +
psbH · NC_058325.1 · 73,855–74,076 bp · +
petB · NC_058325.1 · 74,198–75,555 bp · +
petD · NC_058325.1 · 75,744–76,959 bp · +
ycf2 · NC_058325.1 · 85,432–92,271 bp · +
ycf15 · NC_058325.1 · 92,362–92,610 bp · +
trnV-GAC · NC_058325.1 · 98,901–98,972 bp · +
rrn16 · NC_058325.1 · 99,200–100,690 bp · +
trnI-GAU · NC_058325.1 · 100,989–102,009 bp · +
trnA-UGC · NC_058325.1 · 102,074–102,955 bp · +
rrn23 · NC_058325.1 · 103,117–105,933 bp · +
rrn4.5 · NC_058325.1 · 106,034–106,136 bp · +
rrn5 · NC_058325.1 · 106,366–106,486 bp · +
trnR-ACG · NC_058325.1 · 106,731–106,804 bp · +
rpl32 · NC_058325.1 · 111,624–111,800 bp · +
trnL-UAG · NC_058325.1 · 112,213–112,292 bp · +
ccsA · NC_058325.1 · 112,377–113,348 bp · +
trnN-GUU · NC_058325.1 · 127,495–127,566 bp · +
rps7 · NC_058325.1 · 138,495–138,962 bp · +
ndhB · NC_058325.1 · 139,237–141,448 bp · +
trnL-CAA · NC_058325.1 · 141,995–142,075 bp · +
trnI-CAU · NC_058325.1 · 149,610–149,683 bp · +
rpl23 · NC_058325.1 · 149,849–150,130 bp · +
rpl2 · NC_058325.1 · 150,149–151,640 bp · +
rps19 · NC_058325.1 · 151,700–151,735 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Caryopteris forrestii
ANNOTATED PLASTOME
NC_058325.1
151,735 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37934 75868 113801 151735 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 328 1386 1059 Locate
trnK-UUU gene − 1619 4194 2576 Locate
matK gene − 1920 3455 1536 Locate
rps16 gene − 5057 6220 1164 Locate
trnQ-UUG gene − 7454 7525 72 Locate
psbK gene + 7846 8040 195 Locate
psbI gene + 8253 8363 111 Locate
trnS-GCU gene − 8484 8571 88 Locate
trnG-UCC gene + 9234 9989 756 Locate
trnR-UCU gene + 10128 10199 72 Locate
atpA gene − 10308 11831 1524 Locate
atpF gene − 11933 13173 1241 Locate
atpH gene − 13548 13793 246 Locate
atpI gene − 14805 15548 744 Locate
rps2 gene − 15781 16491 711 Locate
rpoC2 gene − 16717 20826 4110 Locate
rpoC1 gene − 20993 23820 2828 Locate
rpoB gene − 23847 27059 3213 Locate
trnC-GCA gene + 28212 28282 71 Locate
petN gene + 29014 29103 90 Locate
psbM gene − 29747 29851 105 Locate
trnD-GUC gene − 30375 30448 74 Locate
trnY-GUA gene − 30556 30639 84 Locate
trnE-UUC gene − 30699 30771 73 Locate
trnT-GGU gene + 31348 31419 72 Locate
psbD gene + 32744 33805 1062 Locate
psbC gene + 33753 35174 1422 Locate
trnS-UGA gene − 35428 35520 93 Locate
psbZ gene + 35756 36028 273 Locate
trnG-GCC gene + 36327 36397 71 Locate
trnfM-CAU gene − 36562 36635 74 Locate
rps14 gene − 36780 37082 303 Locate
psaB gene − 37206 39410 2205 Locate
psaA gene − 39436 41688 2253 Locate
ycf3 gene − 42405 44338 1934 Locate
trnS-GGA gene + 44749 44835 87 Locate
rps4 gene − 45137 45739 603 Locate
trnT-UGU gene − 46101 46173 73 Locate
trnL-UAA gene + 46871 47444 574 Locate
trnF-GAA gene + 47744 47816 73 Locate
ndhJ gene − 48477 48971 495 Locate
ndhK gene − 49054 49905 852 Locate
ndhC gene − 49785 50147 363 Locate
trnV-UAC gene − 51011 51674 664 Locate
trnM-CAU gene + 51855 51927 73 Locate
atpE gene − 52053 52475 423 Locate
atpB gene − 52472 53968 1497 Locate
rbcL gene + 54724 56193 1470 Locate
accD gene + 56799 58337 1539 Locate
psaI gene + 59049 59159 111 Locate
ycf4 gene + 59569 60123 555 Locate
cemA gene + 60769 61458 690 Locate
petA gene + 61671 62633 963 Locate
psbJ gene − 63592 63714 123 Locate
psbL gene − 63856 63972 117 Locate
psbF gene − 63996 64115 120 Locate
psbE gene − 64130 64381 252 Locate
petL gene + 65281 65376 96 Locate
petG gene + 65551 65664 114 Locate
trnW-CCA gene − 65787 65860 74 Locate
trnP-UGG gene − 66047 66120 74 Locate
psaJ gene + 66409 66543 135 Locate
rpl33 gene + 67000 67200 201 Locate
rps18 gene + 67366 67671 306 Locate
rpl20 gene − 67908 68294 387 Locate
rps12 gene − 69109 69222 114 Locate
clpP gene − 69365 71284 1920 Locate
psbB gene + 71730 73256 1527 Locate
psbT gene + 73450 73557 108 Locate
psbN gene − 73618 73749 132 Locate
psbH gene + 73855 74076 222 Locate
petB gene + 74198 75555 1358 Locate
petD gene + 75744 76959 1216 Locate
rpoA gene − 77136 78155 1020 Locate
rps11 gene − 78227 78643 417 Locate
rpl36 gene − 78746 78859 114 Locate
infA gene − 78955 79188 234 Locate
rps8 gene − 79313 79717 405 Locate
rpl14 gene − 79893 80261 369 Locate
rpl16 gene − 80388 81665 1278 Locate
rps3 gene − 81823 82473 651 Locate
rpl22 gene − 82458 82925 468 Locate
rps19 gene − 82981 83259 279 Locate
rpl2 gene − 83313 84804 1492 Locate
rpl23 gene − 84823 85104 282 Locate
trnI-CAU gene − 85270 85343 74 Locate
ycf2 gene + 85432 92271 6840 Locate
ycf15 gene + 92362 92610 249 Locate
trnL-CAA gene − 92878 92958 81 Locate
ndhB gene − 93505 95716 2212 Locate
rps7 gene − 95991 96458 468 Locate
rps12 gene − 96512 97308 797 Locate
trnV-GAC gene + 98901 98972 72 Locate
rrn16 gene + 99200 100690 1491 Locate
trnI-GAU gene + 100989 102009 1021 Locate
trnA-UGC gene + 102074 102955 882 Locate
rrn23 gene + 103117 105933 2817 Locate
rrn4.5 gene + 106034 106136 103 Locate
rrn5 gene + 106366 106486 121 Locate
trnR-ACG gene + 106731 106804 74 Locate
trnN-GUU gene − 107387 107458 72 Locate
ndhF gene − 108798 111089 2292 Locate
rpl32 gene + 111624 111800 177 Locate
trnL-UAG gene + 112213 112292 80 Locate
ccsA gene + 112377 113348 972 Locate
ndhD gene − 113597 115126 1530 Locate
psaC gene − 115218 115463 246 Locate
ndhE gene − 115689 115994 306 Locate
ndhG gene − 116203 116733 531 Locate
ndhI gene − 117060 117566 507 Locate
ndhA gene − 117642 119646 2005 Locate
ndhH gene − 119648 120883 1236 Locate
rps15 gene − 120926 121198 273 Locate
ycf1 gene − 121586 127276 5691 Locate
trnN-GUU gene + 127495 127566 72 Locate
trnR-ACG gene − 128149 128222 74 Locate
rrn5 gene − 128467 128587 121 Locate
rrn4.5 gene − 128817 128919 103 Locate
rrn23 gene − 129020 131836 2817 Locate
trnA-UGC gene − 131998 132879 882 Locate
trnI-GAU gene − 132944 133964 1021 Locate
rrn16 gene − 134263 135753 1491 Locate
trnV-GAC gene − 135981 136052 72 Locate
rps12 gene + 137645 138441 797 Locate
rps7 gene + 138495 138962 468 Locate
ndhB gene + 139237 141448 2212 Locate
trnL-CAA gene + 141995 142075 81 Locate
ycf15 gene − 142343 142591 249 Locate
ycf2 gene − 142682 149521 6840 Locate
trnI-CAU gene + 149610 149683 74 Locate
rpl23 gene + 149849 150130 282 Locate
rpl2 gene + 150149 151640 1492 Locate
rps19 gene + 151700 151735 36 Locate
Status Available
Accession NC_058325.1
Length 151,735 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources