Coordinate-aware organelle record

Caryopteris trichosphaera chloroplast genome

Available MN814860.1 151,380 bp 128 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

128 features

Gene	Type	Group	Strand	Start	End	Length
atpA	gene	atp-synthase	+	0	1524	1524
trnR-UCU	gene	translation-rna	−	1632	1704	72
trnG-UCC	gene	translation-rna	−	1839	2599	760
trnS-GCU	gene	translation-rna	+	3290	3378	88
psbI	gene	photosystem-ii	−	3498	3609	111
psbK	gene	photosystem-ii	−	3821	4007	186
trnQ-UUG	gene	translation-rna	+	4336	4408	72
rps16	gene	ribosomal-protein	+	5328	6496	1168
trnK-UUU	gene	translation-rna	+	7360	9936	2576
matK	gene	other	+	8099	9635	1536
psbA	gene	photosystem-ii	+	10168	11227	1059
trnH-GUG	gene	translation-rna	+	11467	11541	74
rpl2	gene	ribosomal-protein	−	11637	13129	1492
rpl23	gene	ribosomal-protein	−	13147	13429	282
trnI-CAU	gene	translation-rna	−	13594	13668	74
ycf2	gene	other	+	13756	20578	6822
trnL-CAA	gene	translation-rna	−	21184	21265	81
ndhB	gene	nad-dehydrogenase	−	21811	24023	2212
rps7	gene	ribosomal-protein	−	24297	24765	468
rps12	gene	ribosomal-protein	+	24818	94135	69317
trnV-GAC	gene	translation-rna	+	27213	27285	72
rrn16	gene	ribosomal-rna	−	27512	29002	1490
trnI-GAU	gene	translation-rna	+	29301	30322	1021
trnA-UGC	gene	translation-rna	+	30386	31267	881
rrn23	gene	ribosomal-rna	+	31428	34244	2816
rrn4.5	gene	ribosomal-rna	+	34345	34448	103
rrn5	gene	ribosomal-rna	+	34677	34798	121
trnR-ACG	gene	translation-rna	+	35042	35116	74
trnN-GUU	gene	translation-rna	−	35677	35749	72
ycf1	gene	other	+	36090	41658	5568
rps15	gene	ribosomal-protein	+	42064	42337	273
ndhH	gene	nad-dehydrogenase	+	42433	43615	1182
ndhI	gene	nad-dehydrogenase	+	45697	46204	507
ndhG	gene	nad-dehydrogenase	+	46530	47061	531
ndhE	gene	nad-dehydrogenase	+	47262	47568	306
psaC	gene	photosystem-i	+	47793	48039	246
ndhD	gene	nad-dehydrogenase	+	48157	49660	1503
ccsA	gene	other	−	49927	50899	972
trnL-UAG	gene	translation-rna	−	50983	51063	80
rpl32	gene	ribosomal-protein	−	51475	51652	177
ndhF	gene	nad-dehydrogenase	+	52194	54480	2286
ycf1	gene	other	−	54368	55478	1110
trnN-GUU	gene	translation-rna	+	55819	55891	72
trnR-ACG	gene	translation-rna	−	56452	56526	74
rrn5	gene	ribosomal-rna	−	56770	56891	121
rrn4.5	gene	ribosomal-rna	−	57120	57223	103
rrn23	gene	ribosomal-rna	−	57324	60140	2816
trnA-UGC	gene	translation-rna	−	60301	61182	881
trnI-GAU	gene	translation-rna	−	61246	62267	1021
rrn16	gene	ribosomal-rna	−	62566	64056	1490
trnV-GAC	gene	translation-rna	−	64283	64355	72
rps12	gene	ribosomal-protein	+	65953	94135	28182
rps7	gene	ribosomal-protein	+	66803	67271	468
ndhB	gene	nad-dehydrogenase	+	67545	69757	2212
trnL-CAA	gene	translation-rna	+	70303	70384	81
ycf2	gene	other	−	70990	77812	6822
trnI-CAU	gene	translation-rna	+	77900	77974	74
rpl23	gene	ribosomal-protein	+	78139	78421	282
rpl2	gene	ribosomal-protein	+	78439	79931	1492
rps19	gene	ribosomal-protein	+	79984	80263	279
rpl22	gene	ribosomal-protein	+	80318	80786	468
rps3	gene	ribosomal-protein	+	80770	81421	651
rpl14	gene	ribosomal-protein	+	82981	83350	369
rps8	gene	ribosomal-protein	+	83525	83930	405
infA	gene	other	+	84054	84288	234
rpl36	gene	ribosomal-protein	+	84383	84497	114
rps11	gene	ribosomal-protein	+	84599	85016	417
rpoA	gene	rna-polymerase	+	85087	86107	1020
petD	gene	cytochrome	−	86283	87498	1215
psbH	gene	photosystem-ii	−	89163	89385	222
psbN	gene	photosystem-ii	+	89490	89622	132
psbT	gene	photosystem-ii	−	89682	89790	108
psbB	gene	photosystem-ii	−	89983	91510	1527
clpP	gene	other	+	91955	93879	1924
rpl20	gene	ribosomal-protein	+	94952	95339	387
rps18	gene	ribosomal-protein	−	95575	95881	306
rpl33	gene	ribosomal-protein	−	96046	96247	201
psaJ	gene	photosystem-i	−	96703	96838	135
trnP-UGG	gene	translation-rna	+	97114	97188	74
trnW-CCA	gene	translation-rna	+	97374	97448	74
petG	gene	cytochrome	−	97570	97684	114
petL	gene	cytochrome	−	97858	97954	96
psbE	gene	photosystem-ii	+	98854	99106	252
psbF	gene	photosystem-ii	+	99120	99240	120
psbL	gene	photosystem-ii	+	99263	99380	117
psbJ	gene	photosystem-ii	+	99521	99644	123
petA	gene	cytochrome	−	100593	101556	963
cemA	gene	other	−	101768	102458	690
ycf4	gene	other	−	103103	103658	555
psaI	gene	photosystem-i	−	104068	104179	111
accD	gene	other	−	104890	106429	1539
rbcL	gene	other	−	107012	108461	1449
atpB	gene	atp-synthase	+	109238	110735	1497
atpE	gene	atp-synthase	+	110731	111154	423
trnM-CAU	gene	translation-rna	−	111300	111373	73
trnV-UAC	gene	translation-rna	+	111553	112218	665
ndhC	gene	nad-dehydrogenase	+	113081	113444	363
ndhK	gene	nad-dehydrogenase	+	113497	114175	678
ndhJ	gene	nad-dehydrogenase	+	114275	114752	477
trnP-GAA	gene	translation-rna	−	115411	115484	73
trnL-UAA	gene	translation-rna	−	115778	116345	567
trnT-UGU	gene	translation-rna	+	117042	117115	73
rps4	gene	ribosomal-protein	+	117476	118079	603
trnS-GGA	gene	translation-rna	−	118380	118467	87
ycf3	gene	other	+	118921	120855	1934
psaA	gene	photosystem-i	+	121551	123804	2253
psaB	gene	photosystem-i	+	123829	126034	2205
rps14	gene	ribosomal-protein	+	126158	126461	303
trnM-CAU	gene	translation-rna	+	126605	126679	74
trnG-GCC	gene	translation-rna	−	126849	126920	71
psbZ	gene	photosystem-ii	−	127188	127377	189
trnS-UGA	gene	translation-rna	+	127696	127789	93
psbC	gene	photosystem-ii	−	128042	129464	1422
psbD	gene	photosystem-ii	−	129411	130473	1062
trnT-GGU	gene	translation-rna	−	131804	131876	72
trnE-UUC	gene	translation-rna	+	132441	132514	73
trnY-GUA	gene	translation-rna	+	132573	132657	84
trnD-GUC	gene	translation-rna	+	132764	132838	74
psbM	gene	photosystem-ii	+	133368	133473	105
petN	gene	cytochrome	−	134116	134206	90
trnC-GCA	gene	translation-rna	−	134934	135005	71
rpoB	gene	rna-polymerase	+	136157	139370	3213
rpoC1	gene	rna-polymerase	+	139396	142224	2828
rpoC2	gene	rna-polymerase	+	142390	146500	4110
rps2	gene	ribosomal-protein	+	146723	147434	711
atpI	gene	atp-synthase	+	147666	148410	744
atpH	gene	atp-synthase	+	149421	149667	246
atpF	gene	atp-synthase	+	150043	151279	1236

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN814860.1DNA · accDMN814860DNA · atpBMN814860DNA · matKMN814860DNA · ndhFMN814860DNA · psbAMN814860DNA · rbcLMN814860DNA · rps12MN814860DNA · ycf1MN814860