Coordinate-aware organelle record

Clerodendrum japonicum chloroplast genome

Available NC_056260.1 152,171 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	242	1301	1059
trnK-UUU	gene	translation-rna	−	1516	4090	2574
matK	gene	other	−	1808	3344	1536
rps16	gene	ribosomal-protein	−	4731	5880	1149
trnQ-UUG	gene	translation-rna	−	7142	7214	72
psbK	gene	photosystem-ii	+	7574	7760	186
psbI	gene	photosystem-ii	+	8167	8278	111
trnS-GCU	gene	translation-rna	−	8405	8493	88
trnG-UCC	gene	translation-rna	+	9155	9925	770
trnR-UCU	gene	translation-rna	+	10109	10181	72
atpA	gene	atp-synthase	−	10285	11809	1524
atpF	gene	atp-synthase	−	11912	13134	1222
atpH	gene	atp-synthase	−	13513	13759	246
atpI	gene	atp-synthase	−	14782	15526	744
rps2	gene	ribosomal-protein	−	15731	16442	711
rpoC2	gene	rna-polymerase	−	16648	20815	4167
rpoC1	gene	rna-polymerase	−	20972	23790	2818
rpoB	gene	rna-polymerase	−	23816	27029	3213
trnC-GCA	gene	translation-rna	+	28238	28309	71
petN	gene	cytochrome	+	28868	28958	90
psbM	gene	photosystem-ii	−	29876	29981	105
trnD-GUC	gene	translation-rna	−	30494	30568	74
trnY-GUA	gene	translation-rna	−	30685	30769	84
trnE-UUC	gene	translation-rna	−	30828	30901	73
trnT-GGU	gene	translation-rna	+	31459	31531	72
psbD	gene	photosystem-ii	+	32701	33763	1062
psbC	gene	photosystem-ii	+	33710	35132	1422
trnS-UGA	gene	translation-rna	−	35394	35487	93
psbZ	gene	photosystem-ii	+	35813	36002	189
trnG-GCC	gene	translation-rna	+	36217	36288	71
trnM-CAU	gene	translation-rna	−	36457	36531	74
rps14	gene	ribosomal-protein	−	36675	36978	303
psaB	gene	photosystem-i	−	37104	39309	2205
psaA	gene	photosystem-i	−	39334	41587	2253
ycf3	gene	other	−	42389	44258	1869
trnS-GGA	gene	translation-rna	+	44952	45039	87
rps4	gene	ribosomal-protein	−	45358	45964	606
trnT-UGU	gene	translation-rna	−	46348	46421	73
trnL-UAA	gene	translation-rna	+	47111	47670	559
trnP-GAA	gene	translation-rna	+	47960	48033	73
ndhJ	gene	nad-dehydrogenase	−	48660	49137	477
ndhK	gene	nad-dehydrogenase	−	49237	49915	678
ndhC	gene	nad-dehydrogenase	−	49968	50331	363
trnV-UAC	gene	translation-rna	−	51178	51842	664
trnM-CAU	gene	translation-rna	+	52022	52095	73
atpE	gene	atp-synthase	−	52326	52728	402
atpB	gene	atp-synthase	−	52724	54221	1497
rbcL	gene	other	+	55013	56453	1440
accD	gene	other	+	57122	58655	1533
psaI	gene	photosystem-i	+	59260	59371	111
ycf4	gene	other	+	59792	60347	555
cemA	gene	other	+	61006	61696	690
petA	gene	cytochrome	+	61905	62868	963
psbJ	gene	photosystem-ii	−	63763	63886	123
psbL	gene	photosystem-ii	−	64019	64136	117
psbF	gene	photosystem-ii	−	64159	64279	120
psbE	gene	photosystem-ii	−	64293	64545	252
petL	gene	cytochrome	+	65456	65552	96
petG	gene	cytochrome	+	65729	65843	114
trnW-CCA	gene	translation-rna	−	65964	66038	74
trnP-UGG	gene	translation-rna	−	66200	66274	74
psaJ	gene	photosystem-i	+	66553	66688	135
rpl33	gene	ribosomal-protein	+	67153	67354	201
rps18	gene	ribosomal-protein	+	67525	67831	306
rpsl20	gene	ribosomal-protein	−	68066	68453	387
rps12	gene	ribosomal-protein	−	69290	97546	28256
rps12	gene	ribosomal-protein	+	69290	138838	69548
clpP	gene	other	−	69532	71485	1953
psbB	gene	photosystem-ii	+	71929	73456	1527
psbT	gene	photosystem-ii	+	73633	73741	108
psbN	gene	photosystem-ii	−	73801	73933	132
psbH	gene	photosystem-ii	+	74038	74260	222
petB	gene	cytochrome	+	74382	75766	1384
petD	gene	cytochrome	+	75953	77171	1218
rpoA	gene	rna-polymerase	−	77360	78374	1014
rps11	gene	ribosomal-protein	−	78459	78876	417
rpl36	gene	ribosomal-protein	−	78977	79091	114
infA	gene	other	−	79187	79421	234
rps8	gene	ribosomal-protein	−	79546	79951	405
rpl14	gene	ribosomal-protein	−	80115	80484	369
rpl16	gene	ribosomal-protein	−	80600	81864	1264
rps3	gene	ribosomal-protein	−	82013	82670	657
rpl22	gene	ribosomal-protein	−	82654	83122	468
rps19	gene	ribosomal-protein	−	83177	83456	279
rpl2	gene	ribosomal-protein	−	83509	85001	1492
rpl23	gene	ribosomal-protein	−	85019	85301	282
trnI-CAU	gene	translation-rna	−	85466	85540	74
ycf2	gene	other	+	85628	92486	6858
ycf15	gene	other	+	92576	92831	255
trnL-CAA	gene	translation-rna	−	93103	93184	81
ndhB	gene	nad-dehydrogenase	−	93742	95954	2212
rps7	gene	ribosomal-protein	−	96228	96696	468
trnV-GAC	gene	translation-rna	+	99132	99204	72
rrn16	gene	ribosomal-rna	−	99431	100921	1490
trnI-GAU	gene	translation-rna	+	101219	102241	1022
trnA-UGC	gene	translation-rna	+	102305	103185	880
rrn23	gene	ribosomal-rna	+	103349	106156	2807
rrn4.5	gene	ribosomal-rna	+	106257	106360	103
rrn5	gene	ribosomal-rna	+	106620	106741	121
trnR-ACG	gene	translation-rna	+	106982	107056	74
trnN-GUU	gene	translation-rna	−	107619	107691	72
ycf1	gene	other	+	108032	109151	1119
ndhF	gene	nad-dehydrogenase	−	109140	111375	2235
rpl32	gene	ribosomal-protein	+	111928	112105	177
trnL-UAG	gene	translation-rna	+	112561	112641	80
ccsA	gene	other	+	112741	113698	957
ndhD	gene	nad-dehydrogenase	−	113942	115472	1530
psaC	gene	photosystem-i	−	115572	115818	246
ndhE	gene	nad-dehydrogenase	−	116068	116374	306
ndhG	gene	nad-dehydrogenase	−	116585	117116	531
ndhI	gene	nad-dehydrogenase	−	117468	117975	507
ndhA	gene	nad-dehydrogenase	−	118055	120065	2010
ndhH	gene	nad-dehydrogenase	−	120066	121248	1182
rps15	gene	ribosomal-protein	−	121344	121617	273
ycf1	gene	other	−	121987	127555	5568
trnN-GUU	gene	translation-rna	+	127896	127968	72
trnR-ACG	gene	translation-rna	−	128531	128605	74
rrn5	gene	ribosomal-rna	−	128846	128967	121
rrn4.5	gene	ribosomal-rna	−	129227	129330	103
rrn23	gene	ribosomal-rna	−	129431	132238	2807
trnA-UGC	gene	translation-rna	−	132402	133282	880
trnI-GAU	gene	translation-rna	−	133346	134368	1022
rrn16	gene	ribosomal-rna	+	134666	136156	1490
trnV-GAC	gene	translation-rna	−	136383	136455	72
rps7	gene	ribosomal-protein	+	138891	139359	468
ndhB	gene	nad-dehydrogenase	+	139633	141845	2212
trnL-CAA	gene	translation-rna	+	142403	142484	81
ycf15	gene	other	−	142756	143011	255
ycf2	gene	other	−	143101	149959	6858
trnI-CAU	gene	translation-rna	+	150047	150121	74
rpl23	gene	ribosomal-protein	+	150286	150568	282
rpl2	gene	ribosomal-protein	+	150586	152078	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_056260.1DNA · accDNC_056260DNA · atpBNC_056260DNA · matKNC_056260DNA · ndhFNC_056260DNA · psbANC_056260DNA · rbcLNC_056260DNA · rps12NC_056260DNA · ycf1NC_056260