Coordinate-aware organelle record

Clerodendrum mandarinorum chloroplast genome

Available MN814861.1 151,288 bp 129 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features

Gene	Type	Group	Strand	Start	End	Length
atpA	gene	atp-synthase	+	0	1524	1524
trnR-UCU	gene	translation-rna	−	1628	1700	72
trnG-UCC	gene	translation-rna	−	1886	2651	765
trnS-GCU	gene	translation-rna	+	3261	3349	88
psbI	gene	photosystem-ii	−	3466	3577	111
psbK	gene	photosystem-ii	−	3985	4171	186
trnQ-UUG	gene	translation-rna	+	4534	4606	72
rps16	gene	ribosomal-protein	+	5584	6748	1164
trnK-UUU	gene	translation-rna	+	7314	9899	2585
matK	gene	other	+	8055	9591	1536
psbA	gene	photosystem-ii	+	10114	11173	1059
trnH-GUG	gene	translation-rna	+	11483	11557	74
rpl2	gene	ribosomal-protein	−	11653	13145	1492
rpl23	gene	ribosomal-protein	−	13163	13445	282
trnI-CAU	gene	translation-rna	−	13604	13678	74
ycf2	gene	other	+	13766	20600	6834
trnL-CAA	gene	translation-rna	−	21205	21286	81
ndhB	gene	nad-dehydrogenase	−	21835	24047	2212
rps7	gene	ribosomal-protein	−	24321	24789	468
rps12	gene	ribosomal-protein	+	24842	94305	69463
trnV-GAC	gene	translation-rna	+	27220	27292	72
rrn16	gene	ribosomal-rna	+	27519	29009	1490
trnI-GAU	gene	translation-rna	+	29307	30327	1020
trnA-UGC	gene	translation-rna	+	30391	31272	881
rrn23	gene	ribosomal-rna	+	31433	34240	2807
rrn4.5	gene	ribosomal-rna	+	34341	34444	103
rrn5	gene	ribosomal-rna	+	34704	34825	121
trnR-ACG	gene	translation-rna	+	35066	35140	74
trnN-GUU	gene	translation-rna	−	35703	35775	72
ycf1	gene	other	+	36116	37211	1095
ndhF	gene	nad-dehydrogenase	−	37207	39433	2226
rpl32	gene	ribosomal-protein	+	39985	40162	177
trnL-UAG	gene	translation-rna	+	40621	40701	80
ccsA	gene	other	+	40795	41749	954
ndhD	gene	nad-dehydrogenase	−	42006	43509	1503
psaC	gene	photosystem-i	−	43636	43882	246
ndhE	gene	nad-dehydrogenase	−	44132	44438	306
ndhG	gene	nad-dehydrogenase	−	44668	45199	531
ndhI	gene	nad-dehydrogenase	−	45562	46069	507
ndhH	gene	nad-dehydrogenase	−	48153	49335	1182
rps15	gene	ribosomal-protein	−	49431	49704	273
ycf1	gene	other	−	50053	55585	5532
trnN-GUU	gene	translation-rna	+	55926	55998	72
trnR-ACG	gene	translation-rna	−	56561	56635	74
rrn5	gene	ribosomal-rna	−	56876	56997	121
rrn4.5	gene	ribosomal-rna	−	57257	57360	103
rrn23	gene	ribosomal-rna	−	57461	60268	2807
trnA-UGC	gene	translation-rna	−	60429	61310	881
trnI-GAU	gene	translation-rna	−	61374	62394	1020
rrn16	gene	ribosomal-rna	−	62692	64182	1490
trnV-GAC	gene	translation-rna	−	64409	64481	72
rps12	gene	ribosomal-protein	+	66062	94305	28243
rps7	gene	ribosomal-protein	+	66912	67380	468
ndhB	gene	nad-dehydrogenase	+	67654	69866	2212
trnL-CAA	gene	translation-rna	+	70415	70496	81
ycf2	gene	other	−	71101	77935	6834
trnI-CAU	gene	translation-rna	+	78023	78097	74
rpl23	gene	ribosomal-protein	+	78256	78538	282
rpl2	gene	ribosomal-protein	+	78556	80048	1492
rps19	gene	ribosomal-protein	+	80101	80380	279
rpl22	gene	ribosomal-protein	+	80435	80903	468
rps3	gene	ribosomal-protein	+	80887	81544	657
rpl16	gene	ribosomal-protein	+	81703	83006	1303
rpl14	gene	ribosomal-protein	+	83122	83491	369
rps8	gene	ribosomal-protein	+	83651	84056	405
infA	gene	other	+	84181	84415	234
rpl36	gene	ribosomal-protein	+	84510	84624	114
rps11	gene	ribosomal-protein	+	84725	85142	417
rpoA	gene	rna-polymerase	+	85220	86234	1014
petD	gene	cytochrome	−	86423	87641	1218
petB	gene	cytochrome	−	87830	89203	1373
psbH	gene	photosystem-ii	−	89324	89546	222
psbN	gene	photosystem-ii	+	89651	89783	132
psbT	gene	photosystem-ii	−	89843	89951	108
psbB	gene	photosystem-ii	−	90129	91656	1527
clpP	gene	other	+	92083	94058	1975
rpl20	gene	ribosomal-protein	+	95034	95421	387
rps18	gene	ribosomal-protein	−	95656	95962	306
rpl33	gene	ribosomal-protein	−	96128	96329	201
psaJ	gene	photosystem-i	−	96800	96935	135
trnP-UGG	gene	translation-rna	+	97272	97346	74
trnW-CCA	gene	translation-rna	+	97513	97587	74
petG	gene	cytochrome	−	97709	97823	114
petL	gene	cytochrome	−	98005	98101	96
psbE	gene	photosystem-ii	+	99019	99271	252
psbF	gene	photosystem-ii	+	99285	99405	120
psbL	gene	photosystem-ii	+	99428	99545	117
psbJ	gene	photosystem-ii	+	99678	99801	123
petA	gene	cytochrome	−	100707	101670	963
cemA	gene	other	−	101870	102560	690
ycf4	gene	other	−	103215	103770	555
psaI	gene	photosystem-i	−	104193	104304	111
accD	gene	other	−	104925	106458	1533
rbcL	gene	other	−	107109	108549	1440
atpB	gene	atp-synthase	+	109337	110834	1497
atpE	gene	atp-synthase	+	110830	111232	402
trnM-CAU	gene	translation-rna	−	111448	111521	73
trnV-UAC	gene	translation-rna	+	111706	112370	664
ndhC	gene	nad-dehydrogenase	+	113251	113614	363
ndhK	gene	nad-dehydrogenase	+	113668	114346	678
ndhJ	gene	nad-dehydrogenase	+	114446	114923	477
trnP-GAA	gene	translation-rna	−	115559	115632	73
trnL-UAA	gene	translation-rna	−	115930	116497	567
trnT-UGU	gene	translation-rna	+	117176	117249	73
rps4	gene	ribosomal-protein	+	117623	118229	606
trnS-GGA	gene	translation-rna	−	118538	118625	87
ycf3	gene	other	+	119304	121254	1950
psaA	gene	photosystem-i	+	121959	124212	2253
psaB	gene	photosystem-i	+	124237	126442	2205
rps14	gene	ribosomal-protein	+	126564	126867	303
trnM-CAU	gene	translation-rna	+	127011	127085	74
trnG-GCC	gene	translation-rna	−	127265	127336	71
psbZ	gene	photosystem-ii	−	127553	127742	189
trnS-UGA	gene	translation-rna	+	128074	128167	93
psbC	gene	photosystem-ii	−	128434	129856	1422
psbD	gene	photosystem-ii	−	129803	130865	1062
trnT-GGU	gene	translation-rna	−	132023	132095	72
trnE-UUC	gene	translation-rna	+	132638	132711	73
trnY-GUA	gene	translation-rna	+	132777	132861	84
trnD-GUC	gene	translation-rna	+	132986	133060	74
psbM	gene	photosystem-ii	+	133581	133686	105
petN	gene	cytochrome	−	134468	134558	90
trnC-GCA	gene	translation-rna	−	135093	135164	71
rpoB	gene	rna-polymerase	+	136367	139580	3213
rpoC2	gene	rna-polymerase	+	142588	146755	4167
rps2	gene	ribosomal-protein	+	146964	147675	711
atpI	gene	atp-synthase	+	147840	148584	744
atpH	gene	atp-synthase	+	149335	149581	246
atpF	gene	atp-synthase	+	149958	151186	1228

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN814861.1DNA · accDMN814861DNA · atpBMN814861DNA · matKMN814861DNA · ndhFMN814861DNA · psbAMN814861DNA · rbcLMN814861DNA · rps12MN814861DNA · ycf1MN814861