Clerodendrum yunnanense chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnR-UCU · MN814862.1 · 1,629–1,700 bp · −
trnG-UCC · MN814862.1 · 1,887–2,651 bp · −
psbI · MN814862.1 · 3,496–3,606 bp · −
psbK · MN814862.1 · 4,008–4,193 bp · −
rpl2 · MN814862.1 · 11,940–13,431 bp · −
rpl23 · MN814862.1 · 13,450–13,731 bp · −
trnI-CAU · MN814862.1 · 13,891–13,964 bp · −
trnL-CAA · MN814862.1 · 21,510–21,590 bp · −
ndhB · MN814862.1 · 22,140–24,351 bp · −
rps7 · MN814862.1 · 24,627–25,094 bp · −
rps12 · MN814862.1 · 25,148–25,944 bp · −
rrn16 · MN814862.1 · 27,825–29,314 bp · −
trnN-GUU · MN814862.1 · 36,009–36,080 bp · −
ndhF · MN814862.1 · 37,509–39,734 bp · −
ndhD · MN814862.1 · 42,305–43,807 bp · −
psaC · MN814862.1 · 43,934–44,179 bp · −
ndhE · MN814862.1 · 44,430–44,735 bp · −
ndhG · MN814862.1 · 44,966–45,496 bp · −
ndhI · MN814862.1 · 45,861–46,367 bp · −
ndhH · MN814862.1 · 48,457–49,638 bp · −
rps15 · MN814862.1 · 49,735–50,007 bp · −
ycf1 · MN814862.1 · 50,372–55,909 bp · −
trnR-ACG · MN814862.1 · 56,886–56,959 bp · −
rrn5 · MN814862.1 · 57,201–57,321 bp · −
rrn4.5 · MN814862.1 · 57,582–57,684 bp · −
rrn23 · MN814862.1 · 57,786–60,592 bp · −
trnA-UGC · MN814862.1 · 60,754–61,634 bp · −
trnI-GAU · MN814862.1 · 61,699–62,718 bp · −
rrn16 · MN814862.1 · 63,017–64,506 bp · −
trnV-GAC · MN814862.1 · 64,734–64,805 bp · −
ycf2 · MN814862.1 · 71,427–78,278 bp · −
petD · MN814862.1 · 86,748–87,965 bp · −
petB · MN814862.1 · 88,180–89,551 bp · −
psbH · MN814862.1 · 89,673–89,894 bp · −
psbT · MN814862.1 · 90,192–90,299 bp · −
psbB · MN814862.1 · 90,478–92,004 bp · −
rps18 · MN814862.1 · 96,090–96,395 bp · −
rpl33 · MN814862.1 · 96,562–96,762 bp · −
psaJ · MN814862.1 · 97,222–97,356 bp · −
petG · MN814862.1 · 98,105–98,218 bp · −
petL · MN814862.1 · 98,400–98,495 bp · −
petA · MN814862.1 · 101,106–102,068 bp · −
cemA · MN814862.1 · 102,268–102,957 bp · −
ycf4 · MN814862.1 · 103,613–104,167 bp · −
psaI · MN814862.1 · 104,590–104,700 bp · −
accD · MN814862.1 · 105,313–106,845 bp · −
rbcL · MN814862.1 · 107,509–108,948 bp · −
trnM-CAU · MN814862.1 · 111,853–111,925 bp · −
trnP-GAA · MN814862.1 · 115,940–116,012 bp · −
trnL-UAA · MN814862.1 · 116,311–116,866 bp · −
trnS-GGA · MN814862.1 · 118,923–119,009 bp · −
trnG-GCC · MN814862.1 · 127,670–127,740 bp · −
psbZ · MN814862.1 · 127,959–128,147 bp · −
psbC · MN814862.1 · 128,832–130,253 bp · −
psbD · MN814862.1 · 130,201–131,262 bp · −
trnT-GGU · MN814862.1 · 132,422–132,493 bp · −
petN · MN814862.1 · 134,875–134,964 bp · −
trnC-GCA · MN814862.1 · 135,500–135,570 bp · −
atpA · MN814862.1 · 1–1,524 bp · +
trnS-GCU · MN814862.1 · 3,292–3,379 bp · +
trnQ-UUG · MN814862.1 · 4,557–4,628 bp · +
rps16 · MN814862.1 · 5,887–7,041 bp · +
trnK-UUU · MN814862.1 · 7,633–10,211 bp · +
matK · MN814862.1 · 8,375–9,910 bp · +
psbA · MN814862.1 · 10,427–11,485 bp · +
trnH-GUG · MN814862.1 · 11,770–11,843 bp · +
ycf2 · MN814862.1 · 14,053–20,904 bp · +
rps12 · MN814862.1 · 94,531–94,644 bp · +
trnV-GAC · MN814862.1 · 27,526–27,597 bp · +
trnI-GAU · MN814862.1 · 29,613–30,632 bp · +
trnA-UGC · MN814862.1 · 30,697–31,577 bp · +
rrn23 · MN814862.1 · 31,739–34,545 bp · +
rrn4.5 · MN814862.1 · 34,647–34,749 bp · +
rrn5 · MN814862.1 · 35,010–35,130 bp · +
trnR-ACG · MN814862.1 · 35,372–35,445 bp · +
ycf1 · MN814862.1 · 36,422–37,519 bp · +
rpl32 · MN814862.1 · 40,268–40,444 bp · +
trnL-UAG · MN814862.1 · 40,920–40,999 bp · +
ccsA · MN814862.1 · 41,094–42,047 bp · +
trnN-GUU · MN814862.1 · 56,251–56,322 bp · +
rps12 · MN814862.1 · 66,387–67,183 bp · +
rps7 · MN814862.1 · 67,237–67,704 bp · +
ndhB · MN814862.1 · 67,980–70,191 bp · +
trnL-CAA · MN814862.1 · 70,741–70,821 bp · +
trnI-CAU · MN814862.1 · 78,367–78,440 bp · +
rpl23 · MN814862.1 · 78,600–78,881 bp · +
rpl2 · MN814862.1 · 78,900–80,391 bp · +
rps19 · MN814862.1 · 80,445–80,723 bp · +
rpl22 · MN814862.1 · 80,779–81,246 bp · +
rps3 · MN814862.1 · 81,231–81,887 bp · +
rpl16 · MN814862.1 · 82,048–83,331 bp · +
rpl14 · MN814862.1 · 83,448–83,816 bp · +
rps8 · MN814862.1 · 83,977–84,381 bp · +
infA · MN814862.1 · 84,506–84,739 bp · +
rpl36 · MN814862.1 · 84,835–84,948 bp · +
rps11 · MN814862.1 · 85,050–85,466 bp · +
rpoA · MN814862.1 · 85,545–86,558 bp · +
psbN · MN814862.1 · 90,000–90,131 bp · +
clpP · MN814862.1 · 92,426–94,398 bp · +
rpl20 · MN814862.1 · 95,468–95,854 bp · +
trnP-UGG · MN814862.1 · 97,668–97,741 bp · +
trnW-CCA · MN814862.1 · 97,909–97,982 bp · +
psbE · MN814862.1 · 99,414–99,665 bp · +
psbF · MN814862.1 · 99,680–99,799 bp · +
psbL · MN814862.1 · 99,823–99,939 bp · +
psbJ · MN814862.1 · 100,073–100,195 bp · +
atpB · MN814862.1 · 109,742–111,238 bp · +
atpE · MN814862.1 · 111,235–111,636 bp · +
trnV-UAC · MN814862.1 · 112,111–112,774 bp · +
ndhC · MN814862.1 · 113,631–113,993 bp · +
ndhK · MN814862.1 · 114,048–114,725 bp · +
ndhJ · MN814862.1 · 114,826–115,302 bp · +
trnT-UGU · MN814862.1 · 117,548–117,620 bp · +
rps4 · MN814862.1 · 118,008–118,613 bp · +
ycf3 · MN814862.1 · 119,687–121,636 bp · +
psaA · MN814862.1 · 122,364–124,616 bp · +
psaB · MN814862.1 · 124,642–126,846 bp · +
rps14 · MN814862.1 · 126,969–127,271 bp · +
trnM-CAU · MN814862.1 · 127,416–127,489 bp · +
trnS-UGA · MN814862.1 · 128,479–128,571 bp · +
trnE-UUC · MN814862.1 · 133,037–133,109 bp · +
trnY-GUA · MN814862.1 · 133,176–133,259 bp · +
trnD-GUC · MN814862.1 · 133,377–133,450 bp · +
psbM · MN814862.1 · 133,976–134,080 bp · +
rpoB · MN814862.1 · 136,766–139,978 bp · +
rpoC2 · MN814862.1 · 142,989–147,155 bp · +
rps2 · MN814862.1 · 147,364–148,074 bp · +
atpI · MN814862.1 · 148,242–148,985 bp · +
atpH · MN814862.1 · 149,737–149,982 bp · +
atpF · MN814862.1 · 150,361–151,588 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Clerodendrum yunnanense
ANNOTATED PLASTOME
MN814862.1
151,691 bp · 129 genes
Gene function
ATP synthase
Transfer RNA
Photosystem II
Ribosomal protein
Other
NADH dehydrogenase
Ribosomal RNA
Photosystem I
RNA polymerase
Cytochrome
0 37923 75846 113768 151691 bp
Forward strand 5′ → 3′
atpA trnS-GCU trnQ-UUG rps16 trnK-UUU matK psbA trnH-GUG ycf2 trnV-GAC trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19 rpl22 rps3 rpl16 rpl14 rps8 infA rpl36 rps11 rpoA psbN clpP rps12 rpl20 trnP-UGG trnW-CCA psbE psbF psbL psbJ atpB atpE trnV-UAC ndhC ndhK ndhJ trnT-UGU rps4 ycf3 psaA psaB rps14 trnM-CAU trnS-UGA trnE-UUC trnY-GUA trnD-GUC psbM rpoB rpoC2 rps2 atpI atpH atpF
trnR-UCU trnG-UCC psbI psbK rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 rrn16 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2 petD petB psbH psbT psbB rps18 rpl33 psaJ petG petL petA cemA ycf4 psaI accD rbcL trnM-CAU trnP-GAA trnL-UAA trnS-GGA trnG-GCC psbZ psbC psbD trnT-GGU petN trnC-GCA
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
130 local segments
Gene Type Group Strand Start End Length
atpA gene + 1 1524 1524 Locate
trnR-UCU gene − 1629 1700 72 Locate
trnG-UCC gene − 1887 2651 765 Locate
trnS-GCU gene + 3292 3379 88 Locate
psbI gene − 3496 3606 111 Locate
psbK gene − 4008 4193 186 Locate
trnQ-UUG gene + 4557 4628 72 Locate
rps16 gene + 5887 7041 1155 Locate
trnK-UUU gene + 7633 10211 2579 Locate
matK gene + 8375 9910 1536 Locate
psbA gene + 10427 11485 1059 Locate
trnH-GUG gene + 11770 11843 74 Locate
rpl2 gene − 11940 13431 1492 Locate
rpl23 gene − 13450 13731 282 Locate
trnI-CAU gene − 13891 13964 74 Locate
ycf2 gene + 14053 20904 6852 Locate
trnL-CAA gene − 21510 21590 81 Locate
ndhB gene − 22140 24351 2212 Locate
rps7 gene − 24627 25094 468 Locate
rps12 gene − 25148 25944 797 Locate
trnV-GAC gene + 27526 27597 72 Locate
rrn16 gene − 27825 29314 1490 Locate
trnI-GAU gene + 29613 30632 1020 Locate
trnA-UGC gene + 30697 31577 881 Locate
rrn23 gene + 31739 34545 2807 Locate
rrn4.5 gene + 34647 34749 103 Locate
rrn5 gene + 35010 35130 121 Locate
trnR-ACG gene + 35372 35445 74 Locate
trnN-GUU gene − 36009 36080 72 Locate
ycf1 gene + 36422 37519 1098 Locate
ndhF gene − 37509 39734 2226 Locate
rpl32 gene + 40268 40444 177 Locate
trnL-UAG gene + 40920 40999 80 Locate
ccsA gene + 41094 42047 954 Locate
ndhD gene − 42305 43807 1503 Locate
psaC gene − 43934 44179 246 Locate
ndhE gene − 44430 44735 306 Locate
ndhG gene − 44966 45496 531 Locate
ndhI gene − 45861 46367 507 Locate
ndhH gene − 48457 49638 1182 Locate
rps15 gene − 49735 50007 273 Locate
ycf1 gene − 50372 55909 5538 Locate
trnN-GUU gene + 56251 56322 72 Locate
trnR-ACG gene − 56886 56959 74 Locate
rrn5 gene − 57201 57321 121 Locate
rrn4.5 gene − 57582 57684 103 Locate
rrn23 gene − 57786 60592 2807 Locate
trnA-UGC gene − 60754 61634 881 Locate
trnI-GAU gene − 61699 62718 1020 Locate
rrn16 gene − 63017 64506 1490 Locate
trnV-GAC gene − 64734 64805 72 Locate
rps12 gene + 66387 67183 797 Locate
rps7 gene + 67237 67704 468 Locate
ndhB gene + 67980 70191 2212 Locate
trnL-CAA gene + 70741 70821 81 Locate
ycf2 gene − 71427 78278 6852 Locate
trnI-CAU gene + 78367 78440 74 Locate
rpl23 gene + 78600 78881 282 Locate
rpl2 gene + 78900 80391 1492 Locate
rps19 gene + 80445 80723 279 Locate
rpl22 gene + 80779 81246 468 Locate
rps3 gene + 81231 81887 657 Locate
rpl16 gene + 82048 83331 1284 Locate
rpl14 gene + 83448 83816 369 Locate
rps8 gene + 83977 84381 405 Locate
infA gene + 84506 84739 234 Locate
rpl36 gene + 84835 84948 114 Locate
rps11 gene + 85050 85466 417 Locate
rpoA gene + 85545 86558 1014 Locate
petD gene − 86748 87965 1218 Locate
petB gene − 88180 89551 1372 Locate
psbH gene − 89673 89894 222 Locate
psbN gene + 90000 90131 132 Locate
psbT gene − 90192 90299 108 Locate
psbB gene − 90478 92004 1527 Locate
clpP gene + 92426 94398 1973 Locate
rps12 gene + 94531 94644 114 Locate
rpl20 gene + 95468 95854 387 Locate
rps18 gene − 96090 96395 306 Locate
rpl33 gene − 96562 96762 201 Locate
psaJ gene − 97222 97356 135 Locate
trnP-UGG gene + 97668 97741 74 Locate
trnW-CCA gene + 97909 97982 74 Locate
petG gene − 98105 98218 114 Locate
petL gene − 98400 98495 96 Locate
psbE gene + 99414 99665 252 Locate
psbF gene + 99680 99799 120 Locate
psbL gene + 99823 99939 117 Locate
psbJ gene + 100073 100195 123 Locate
petA gene − 101106 102068 963 Locate
cemA gene − 102268 102957 690 Locate
ycf4 gene − 103613 104167 555 Locate
psaI gene − 104590 104700 111 Locate
accD gene − 105313 106845 1533 Locate
rbcL gene − 107509 108948 1440 Locate
atpB gene + 109742 111238 1497 Locate
atpE gene + 111235 111636 402 Locate
trnM-CAU gene − 111853 111925 73 Locate
trnV-UAC gene + 112111 112774 664 Locate
ndhC gene + 113631 113993 363 Locate
ndhK gene + 114048 114725 678 Locate
ndhJ gene + 114826 115302 477 Locate
trnP-GAA gene − 115940 116012 73 Locate
trnL-UAA gene − 116311 116866 556 Locate
trnT-UGU gene + 117548 117620 73 Locate
rps4 gene + 118008 118613 606 Locate
trnS-GGA gene − 118923 119009 87 Locate
ycf3 gene + 119687 121636 1950 Locate
psaA gene + 122364 124616 2253 Locate
psaB gene + 124642 126846 2205 Locate
rps14 gene + 126969 127271 303 Locate
trnM-CAU gene + 127416 127489 74 Locate
trnG-GCC gene − 127670 127740 71 Locate
psbZ gene − 127959 128147 189 Locate
trnS-UGA gene + 128479 128571 93 Locate
psbC gene − 128832 130253 1422 Locate
psbD gene − 130201 131262 1062 Locate
trnT-GGU gene − 132422 132493 72 Locate
trnE-UUC gene + 133037 133109 73 Locate
trnY-GUA gene + 133176 133259 84 Locate
trnD-GUC gene + 133377 133450 74 Locate
psbM gene + 133976 134080 105 Locate
petN gene − 134875 134964 90 Locate
trnC-GCA gene − 135500 135570 71 Locate
rpoB gene + 136766 139978 3213 Locate
rpoC2 gene + 142989 147155 4167 Locate
rps2 gene + 147364 148074 711 Locate
atpI gene + 148242 148985 744 Locate
atpH gene + 149737 149982 246 Locate
atpF gene + 150361 151588 1228 Locate
Status Available
Accession MN814862.1
Length 151,691 bp
GC content 38.2%
Annotated genes 129
Gene sequence records 8
Atp Synthase 6 Translation Rna 37 Photosystem Ii 15 Ribosomal Protein 26 Other 13 Nad Dehydrogenase 11 Ribosomal Rna 8 Photosystem I 5 Rna Polymerase 3 Cytochrome 6
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources