Coordinate-aware organelle record

Clinopodium alpinum chloroplast genome

Available PP024531.1 151,983 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	415	1474	1059
trnK-UUU	gene	translation-rna	−	1693	4290	2597
matK	gene	other	−	2018	3548	1530
rps16	gene	ribosomal-protein	−	4848	5981	1133
trnQ-UUG	gene	translation-rna	−	6992	7064	72
psbK	gene	photosystem-ii	+	7450	7636	186
psbI	gene	photosystem-ii	+	8029	8140	111
trnS-GCU	gene	translation-rna	−	8285	8373	88
trnG-UCC	gene	translation-rna	+	9064	9817	753
trnR-UCU	gene	translation-rna	+	9990	10062	72
atpA	gene	atp-synthase	−	10170	11694	1524
atpF	gene	atp-synthase	−	11786	13041	1255
atpH	gene	atp-synthase	−	13313	13559	246
atpI	gene	atp-synthase	−	14590	15334	744
rps2	gene	ribosomal-protein	−	15558	16269	711
rpoC2	gene	rna-polymerase	−	16497	20697	4200
rpoC1	gene	rna-polymerase	−	20857	23669	2812
rpoB	gene	rna-polymerase	−	23695	26908	3213
trnC-GCA	gene	translation-rna	+	28034	28105	71
petN	gene	cytochrome	+	28265	28355	90
psbM	gene	photosystem-ii	−	29309	29414	105
trnD-GUC	gene	translation-rna	−	29928	30005	77
trnY-GUA	gene	translation-rna	−	30120	30206	86
trnE-UUC	gene	translation-rna	−	30284	30357	73
trnT-GGU	gene	translation-rna	+	30907	30981	74
psbD	gene	photosystem-ii	+	32355	33417	1062
psbC	gene	photosystem-ii	+	33364	34786	1422
trnS-UGA	gene	translation-rna	−	35030	35123	93
psbZ	gene	photosystem-ii	+	35461	35650	189
trnG-GCC	gene	translation-rna	+	35919	35991	72
trnM-CAU	gene	translation-rna	−	36164	36239	75
rps14	gene	ribosomal-protein	−	36388	36691	303
psaB	gene	photosystem-i	−	36816	39021	2205
psaA	gene	photosystem-i	−	39046	41299	2253
ycf3	gene	other	−	42108	44051	1943
trnS-GGA	gene	translation-rna	+	44902	44990	88
rps4	gene	ribosomal-protein	−	45276	45882	606
trnT-UGU	gene	translation-rna	−	46248	46323	75
trnL-UAA	gene	translation-rna	+	47003	47579	576
trnF-GAA	gene	translation-rna	+	47871	47945	74
ndhJ	gene	nad-dehydrogenase	−	48582	49059	477
ndhK	gene	nad-dehydrogenase	−	49169	49847	678
ndhC	gene	nad-dehydrogenase	−	49898	50261	363
trnV-UAC	gene	translation-rna	−	51229	51875	646
trnM-CAU	gene	translation-rna	+	52055	52128	73
atpE	gene	atp-synthase	−	52338	52740	402
atpB	gene	atp-synthase	−	52736	54227	1491
rbcL	gene	other	+	54988	56443	1455
accD	gene	other	+	57198	58680	1482
psaI	gene	photosystem-i	+	59152	59263	111
ycf4	gene	other	+	59680	60235	555
cemA	gene	other	+	60614	61304	690
petA	gene	cytochrome	+	61522	62485	963
psbJ	gene	photosystem-ii	−	63499	63622	123
psbL	gene	photosystem-ii	−	63756	63873	117
psbF	gene	photosystem-ii	−	63896	64016	120
psbE	gene	photosystem-ii	−	64030	64282	252
petL	gene	cytochrome	+	65161	65257	96
petG	gene	cytochrome	+	65426	65540	114
trnW-CCA	gene	translation-rna	−	65654	65728	74
trnP-UGG	gene	translation-rna	−	65899	65975	76
psaJ	gene	photosystem-i	+	66248	66383	135
rpl33	gene	ribosomal-protein	+	66831	67035	204
rps18	gene	ribosomal-protein	+	67185	67491	306
rpl20	gene	ribosomal-protein	−	67723	68110	387
rps12	gene	ribosomal-protein	−	68913	97150	28237
rps12	gene	ribosomal-protein	+	68913	138700	69787
clpP1	gene	other	−	69149	71082	1933
psbB	gene	photosystem-ii	+	71540	73067	1527
psbT	gene	photosystem-ii	+	73260	73362	102
psbN	gene	photosystem-ii	−	73430	73562	132
psbH	gene	photosystem-ii	+	73667	73889	222
petB	gene	cytochrome	+	74022	75395	1373
petD	gene	cytochrome	+	75582	76772	1190
rpoA	gene	rna-polymerase	−	76965	77973	1008
rps11	gene	ribosomal-protein	−	78043	78460	417
rpl36	gene	ribosomal-protein	−	78569	78683	114
infA	gene	other	−	78778	79012	234
rps8	gene	ribosomal-protein	−	79137	79542	405
rpl14	gene	ribosomal-protein	−	79724	80093	369
rpl16	gene	ribosomal-protein	−	80224	81503	1279
rps3	gene	ribosomal-protein	−	81653	82316	663
rpl22	gene	ribosomal-protein	−	82300	82768	468
rps19	gene	ribosomal-protein	−	82837	83116	279
rpl2	gene	ribosomal-protein	−	83175	84667	1492
rpl23	gene	ribosomal-protein	−	84685	84967	282
trnM-CAU	gene	translation-rna	−	85131	85206	75
ycf2	gene	other	+	85314	92127	6813
ycf15	gene	other	+	92217	92466	249
trnL-CAA	gene	translation-rna	−	92720	92803	83
ndhB	gene	nad-dehydrogenase	−	93362	95570	2208
rps7	gene	ribosomal-protein	−	95835	96303	468
trnV-GAC	gene	translation-rna	+	98781	98853	72
rrn16	gene	ribosomal-rna	+	99079	100570	1491
trnE-UUC	gene	translation-rna	+	100868	101889	1021
trnA-UGC	gene	translation-rna	+	101959	102837	878
rrn23	gene	ribosomal-rna	+	103001	105812	2811
rrn4.5	gene	ribosomal-rna	+	105910	106013	103
rrn5	gene	ribosomal-rna	+	106273	106394	121
trnR-ACG	gene	translation-rna	+	106637	106712	75
trnN-GUU	gene	translation-rna	−	107234	107308	74
ycf1	gene	other	+	107636	108767	1131
ndhF	gene	nad-dehydrogenase	−	108660	110892	2232
rpl32	gene	ribosomal-protein	+	111333	111504	171
trnL-UAG	gene	translation-rna	+	112256	112336	80
ccsA	gene	other	+	112437	113415	978
ndhD	gene	nad-dehydrogenase	−	113671	115174	1503
psaC	gene	photosystem-i	−	115304	115550	246
ndhE	gene	nad-dehydrogenase	−	115795	116101	306
ndhG	gene	nad-dehydrogenase	−	116315	116846	531
ndhI	gene	nad-dehydrogenase	−	117231	117738	507
ndhA	gene	nad-dehydrogenase	−	117813	119905	2092
ndhH	gene	nad-dehydrogenase	−	119906	121142	1236
rps15	gene	ribosomal-protein	−	121187	121460	273
ycf1	gene	other	−	121909	127531	5622
trnN-GUU	gene	translation-rna	+	127748	127822	74
trnR-ACG	gene	translation-rna	−	128344	128419	75
rrn5	gene	ribosomal-rna	−	128662	128783	121
rrn4.5	gene	ribosomal-rna	−	129043	129146	103
rrn23	gene	ribosomal-rna	−	129244	132055	2811
trnA-UGC	gene	translation-rna	−	132219	133097	878
trnE-UUC	gene	translation-rna	−	133167	134188	1021
rrn16	gene	ribosomal-rna	−	134486	135977	1491
trnV-GAC	gene	translation-rna	−	136203	136275	72
rps7	gene	ribosomal-protein	+	138753	139221	468
ndhB	gene	nad-dehydrogenase	+	139486	141694	2208
trnL-CAA	gene	translation-rna	+	142253	142336	83
ycf15	gene	other	−	142590	142839	249
ycf2	gene	other	−	142929	149742	6813
trnM-CAU	gene	translation-rna	+	149850	149925	75
rpl23	gene	ribosomal-protein	+	150089	150371	282
rpl2	gene	ribosomal-protein	+	150389	151881	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePP024531.1DNA · accDPP024531DNA · atpBPP024531DNA · matKPP024531DNA · ndhFPP024531DNA · psbAPP024531DNA · rbcLPP024531DNA · rps12PP024531DNA · ycf1PP024531