Coordinate-aware organelle record

Clinopodium barosmum chloroplast genome

Available NC_085322.1 152,261 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	408	1467	1059
trnK-UUU	gene	translation-rna	−	1687	4284	2597
matK	gene	other	−	2011	3547	1536
rps16	gene	ribosomal-protein	−	4820	5964	1144
trnQ-UUG	gene	translation-rna	−	6962	7034	72
psbK	gene	photosystem-ii	+	7414	7600	186
psbI	gene	photosystem-ii	+	7990	8101	111
trnS-GCU	gene	translation-rna	−	8260	8348	88
trnG-UCC	gene	translation-rna	+	9042	9795	753
trnR-UCU	gene	translation-rna	+	9976	10048	72
atpA	gene	atp-synthase	−	10156	11680	1524
atpF	gene	atp-synthase	−	11778	13038	1260
atpH	gene	atp-synthase	−	13310	13556	246
atpI	gene	atp-synthase	−	14577	15321	744
rps2	gene	ribosomal-protein	−	15545	16256	711
rpoC2	gene	rna-polymerase	−	16488	20688	4200
rpoC1	gene	rna-polymerase	−	20841	23653	2812
rpoB	gene	rna-polymerase	−	23679	26892	3213
trnC-GCA	gene	translation-rna	+	28031	28102	71
petN	gene	cytochrome	+	28262	28352	90
psbM	gene	photosystem-ii	−	29303	29408	105
trnD-GUC	gene	translation-rna	−	29926	30000	74
trnY-GUA	gene	translation-rna	−	30117	30201	84
trnE-UUC	gene	translation-rna	−	30280	30353	73
trnT-GGU	gene	translation-rna	+	30942	31014	72
psbD	gene	photosystem-ii	+	32379	33441	1062
psbC	gene	photosystem-ii	+	33388	34810	1422
trnS-UGA	gene	translation-rna	−	35054	35147	93
psbZ	gene	photosystem-ii	+	35485	35674	189
trnG-GCC	gene	translation-rna	+	35945	36016	71
trnfM-CAU	gene	translation-rna	−	36191	36265	74
rps14	gene	ribosomal-protein	−	36419	36722	303
psaB	gene	photosystem-i	−	36844	39049	2205
psaA	gene	photosystem-i	−	39074	41327	2253
ycf3	gene	other	−	42101	44058	1957
trnS-GGA	gene	translation-rna	+	44908	44995	87
rps4	gene	ribosomal-protein	−	45295	45901	606
trnT-UGU	gene	translation-rna	−	46272	46345	73
trnL-UAA	gene	translation-rna	+	47021	47599	578
trnF-GAA	gene	translation-rna	+	47890	47963	73
ndhJ	gene	nad-dehydrogenase	−	48606	49083	477
ndhC	gene	nad-dehydrogenase	−	49922	50285	363
trnV-UAC	gene	translation-rna	−	51242	51895	653
trnM-CAU	gene	translation-rna	+	52075	52148	73
atpE	gene	atp-synthase	−	52358	52760	402
atpB	gene	atp-synthase	−	52756	54247	1491
rbcL	gene	other	+	55015	56470	1455
accD	gene	other	+	57165	58647	1482
psaI	gene	photosystem-i	+	59119	59230	111
ycf4	gene	other	+	59677	60232	555
cemA	gene	other	+	60879	61569	690
petA	gene	cytochrome	+	61790	62753	963
psbJ	gene	photosystem-ii	−	63777	63900	123
psbL	gene	photosystem-ii	−	64034	64256	222
psbF	gene	photosystem-ii	−	64174	64294	120
psbE	gene	photosystem-ii	−	64308	64560	252
petL	gene	cytochrome	+	65436	65532	96
petG	gene	cytochrome	+	65701	65815	114
trnW-CCA	gene	translation-rna	−	65937	66011	74
trnP-UGG	gene	translation-rna	−	66184	66258	74
psaJ	gene	photosystem-i	+	66507	66666	159
rpl33	gene	ribosomal-protein	+	67117	67321	204
rps18	gene	ribosomal-protein	+	67491	67797	306
rpl20	gene	ribosomal-protein	−	68036	68423	387
rps12	gene	ribosomal-protein	−	69230	97431	28201
rps12	gene	ribosomal-protein	+	69230	139037	69807
clpP	gene	other	−	69482	71419	1937
psbB	gene	photosystem-ii	+	71871	73398	1527
psbT	gene	photosystem-ii	+	73589	73691	102
psbN	gene	photosystem-ii	−	73759	73891	132
psbH	gene	photosystem-ii	+	73996	74218	222
petB	gene	cytochrome	+	74343	75730	1387
petD	gene	cytochrome	+	75917	77104	1187
rpoA	gene	rna-polymerase	−	77297	78305	1008
rps11	gene	ribosomal-protein	−	78378	78795	417
rpl36	gene	ribosomal-protein	−	78904	79018	114
infA	gene	other	−	79113	79347	234
rps8	gene	ribosomal-protein	−	79475	79880	405
rpl14	gene	ribosomal-protein	−	80064	80433	369
rpl16	gene	ribosomal-protein	−	80564	81844	1280
rps3	gene	ribosomal-protein	−	81993	82656	663
rpl22	gene	ribosomal-protein	−	82640	83108	468
rps19	gene	ribosomal-protein	−	83177	83456	279
rpl2	gene	ribosomal-protein	−	83515	85004	1489
rpl23	gene	ribosomal-protein	−	85022	85304	282
trnI-CAU	gene	translation-rna	−	85469	85543	74
ycf2	gene	other	+	85631	92408	6777
ycf15	gene	other	+	92549	92747	198
trnL-CAA	gene	translation-rna	−	93002	93083	81
ndhB	gene	nad-dehydrogenase	−	93643	95797	2154
rps7	gene	ribosomal-protein	−	96116	96584	468
trnV-GAC	gene	translation-rna	+	99070	99142	72
rrn16	gene	ribosomal-rna	+	99368	100859	1491
trnI-GAU	gene	translation-rna	+	101157	102178	1021
trnA-UGC	gene	translation-rna	+	102248	103126	878
rrn23	gene	ribosomal-rna	+	103296	106105	2809
rrn4.5	gene	ribosomal-rna	+	106205	106308	103
rrn5	gene	ribosomal-rna	+	106568	106689	121
trnR-ACG	gene	translation-rna	+	106932	107006	74
trnN-GUU	gene	translation-rna	−	107530	107602	72
ndhF	gene	nad-dehydrogenase	−	108955	111187	2232
rpl32	gene	ribosomal-protein	+	111638	111809	171
trnL-UAG	gene	translation-rna	+	112574	112654	80
ccsA	gene	other	+	112762	113740	978
ndhD	gene	nad-dehydrogenase	−	113986	115516	1530
psaC	gene	photosystem-i	−	115610	115856	246
ndhE	gene	nad-dehydrogenase	−	116103	116406	303
ndhG	gene	nad-dehydrogenase	−	116644	117175	531
ndhI	gene	nad-dehydrogenase	−	117554	118061	507
ndhA	gene	nad-dehydrogenase	−	118136	120235	2099
ndhH	gene	nad-dehydrogenase	−	120236	121472	1236
rps15	gene	ribosomal-protein	−	121517	121790	273
ycf1	gene	other	−	122220	127854	5634
trnN-GUU	gene	translation-rna	+	128072	128144	72
trnR-ACG	gene	translation-rna	−	128668	128742	74
rrn5	gene	ribosomal-rna	−	128985	129106	121
rrn4.5	gene	ribosomal-rna	−	129366	129469	103
rrn23	gene	ribosomal-rna	−	129569	132378	2809
trnA-UGC	gene	translation-rna	−	132548	133426	878
trnI-GAU	gene	translation-rna	−	133496	134517	1021
rrn16	gene	ribosomal-rna	−	134815	136306	1491
trnV-GAC	gene	translation-rna	−	136532	136604	72
rps7	gene	ribosomal-protein	+	139090	139558	468
ndhB	gene	nad-dehydrogenase	+	139877	142031	2154
trnL-CAA	gene	translation-rna	+	142591	142672	81
ycf15	gene	other	−	142927	143125	198
ycf2	gene	other	−	143266	150043	6777
trnI-CAU	gene	translation-rna	+	150131	150205	74
rpl23	gene	ribosomal-protein	+	150370	150652	282
rpl2	gene	ribosomal-protein	+	150670	152159	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_085322.1DNA · accDNC_085322DNA · atpBNC_085322DNA · matKNC_085322DNA · ndhFNC_085322DNA · psbANC_085322DNA · rbcLNC_085322DNA · rps12NC_085322DNA · ycf1NC_085322