Coordinate-aware organelle record

Clinopodium chinense chloroplast genome

Available NC_050943.1 151,989 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	388	1447	1059
trnK-UUU	gene	translation-rna	−	1667	4258	2591
matK	gene	other	−	1991	3521	1530
rps16	gene	ribosomal-protein	−	4800	5938	1138
trnQ-UUG	gene	translation-rna	−	6864	6936	72
psbK	gene	photosystem-ii	+	7317	7503	186
psbI	gene	photosystem-ii	+	7893	8004	111
trnS-GCU	gene	translation-rna	−	8149	8237	88
trnG-UCC	gene	translation-rna	+	8943	9697	754
trnR-UCU	gene	translation-rna	+	9879	9951	72
atpA	gene	atp-synthase	−	10059	11583	1524
atpF	gene	atp-synthase	−	11680	12936	1256
atpH	gene	atp-synthase	−	13208	13454	246
atpI	gene	atp-synthase	−	14479	15223	744
rps2	gene	ribosomal-protein	−	15447	16158	711
rpoC2	gene	rna-polymerase	−	16381	20581	4200
rpoC1	gene	rna-polymerase	−	20741	23553	2812
rpoB	gene	rna-polymerase	−	23579	26792	3213
trnC-GCA	gene	translation-rna	+	27941	28012	71
petN	gene	cytochrome	+	28172	28262	90
psbM	gene	photosystem-ii	−	29230	29335	105
trnD-GUC	gene	translation-rna	−	29853	29927	74
trnY-GUA	gene	translation-rna	−	30045	30129	84
trnT-GGU	gene	translation-rna	+	30832	30904	72
psbD	gene	photosystem-ii	+	32256	33318	1062
psbC	gene	photosystem-ii	+	33265	34687	1422
trnS-UGA	gene	translation-rna	−	34931	35023	92
psbZ	gene	photosystem-ii	+	35362	35551	189
trnG-GCC	gene	translation-rna	+	35822	35893	71
trnfM-CAU	gene	translation-rna	−	36055	36129	74
rps14	gene	ribosomal-protein	−	36278	36581	303
psaB	gene	photosystem-i	−	36703	38908	2205
psaA	gene	photosystem-i	−	38933	41186	2253
ycf3	gene	other	−	41969	43907	1938
trnS-GGA	gene	translation-rna	+	44728	44815	87
rps4	gene	ribosomal-protein	−	45106	45712	606
trnT-UGU	gene	translation-rna	−	46097	46170	73
trnL-UAA	gene	translation-rna	+	46840	47417	577
trnF-GAA	gene	translation-rna	+	47699	47772	73
ndhJ	gene	nad-dehydrogenase	−	48411	48888	477
ndhK	gene	nad-dehydrogenase	−	48998	49676	678
ndhC	gene	nad-dehydrogenase	−	49727	50090	363
trnV-UAC	gene	translation-rna	−	51038	51683	645
trnM-CAU	gene	translation-rna	+	51869	51942	73
atpE	gene	atp-synthase	−	52137	52539	402
atpB	gene	atp-synthase	−	52535	54002	1467
rbcL	gene	other	+	54770	56225	1455
accD	gene	other	+	56921	58403	1482
psaI	gene	photosystem-i	+	58894	59005	111
ycf4	gene	other	+	59449	60004	555
cemA	gene	other	+	60661	61351	690
petA	gene	cytochrome	+	61564	62527	963
psbJ	gene	photosystem-ii	−	63562	63685	123
psbL	gene	photosystem-ii	−	63819	63936	117
psbF	gene	photosystem-ii	−	63959	64079	120
psbE	gene	photosystem-ii	−	64093	64345	252
petL	gene	cytochrome	+	65216	65312	96
petG	gene	cytochrome	+	65481	65595	114
trnW-CCA	gene	translation-rna	−	65715	65789	74
trnP-UGG	gene	translation-rna	−	65968	66042	74
psaJ	gene	photosystem-i	+	66319	66454	135
rpl33	gene	ribosomal-protein	+	66909	67113	204
rps18	gene	ribosomal-protein	+	67283	67589	306
rpl20	gene	ribosomal-protein	−	67828	68215	387
rps12	gene	ribosomal-protein	−	69010	97225	28215
rps12	gene	ribosomal-protein	+	69010	138744	69734
clpP	gene	other	−	69275	71206	1931
psbB	gene	photosystem-ii	+	71657	73184	1527
psbT	gene	photosystem-ii	+	73374	73476	102
psbN	gene	photosystem-ii	−	73544	73676	132
psbH	gene	photosystem-ii	+	73781	74003	222
petB	gene	cytochrome	+	74128	75505	1377
petD	gene	cytochrome	+	75692	76879	1187
rpoA	gene	rna-polymerase	−	77061	78069	1008
rps11	gene	ribosomal-protein	−	78140	78557	417
rpl36	gene	ribosomal-protein	−	78666	78780	114
infA	gene	other	−	78875	79109	234
rps8	gene	ribosomal-protein	−	79234	79639	405
rpl14	gene	ribosomal-protein	−	79826	80195	369
rpl16	gene	ribosomal-protein	−	80326	81609	1283
rps3	gene	ribosomal-protein	−	81753	82416	663
rpl22	gene	ribosomal-protein	−	82400	82868	468
rps19	gene	ribosomal-protein	−	82953	83235	282
rpl2	gene	ribosomal-protein	−	83291	84781	1490
rpl23	gene	ribosomal-protein	−	84799	85081	282
trnI-CAU	gene	translation-rna	−	85246	85320	74
ycf2	gene	other	+	85408	92194	6786
ycf15	gene	other	+	92284	92533	249
trnL-CAA	gene	translation-rna	−	92788	92869	81
ndhB	gene	nad-dehydrogenase	−	93440	95648	2208
rps7	gene	ribosomal-protein	−	95913	96381	468
trnV-GAC	gene	translation-rna	+	98864	98936	72
rrn16	gene	ribosomal-rna	+	99162	100653	1491
trnI-GAU	gene	translation-rna	+	100951	101970	1019
trnA-UGC	gene	translation-rna	+	102040	102918	878
rrn23	gene	ribosomal-rna	+	103088	105899	2811
rrn4.5	gene	ribosomal-rna	+	105997	106100	103
rrn5	gene	ribosomal-rna	+	106360	106481	121
trnR-ACG	gene	translation-rna	+	106724	106798	74
trnN-GUU	gene	translation-rna	−	107322	107394	72
ndhF	gene	nad-dehydrogenase	−	108747	110979	2232
rpl32	gene	ribosomal-protein	+	111441	111612	171
trnL-UAG	gene	translation-rna	+	112341	112421	80
ccsA	gene	other	+	112521	113499	978
ndhD	gene	nad-dehydrogenase	−	113732	115262	1530
psaC	gene	photosystem-i	−	115355	115601	246
ndhE	gene	nad-dehydrogenase	−	115841	116147	306
ndhG	gene	nad-dehydrogenase	−	116370	116901	531
ndhI	gene	nad-dehydrogenase	−	117281	117788	507
ndhA	gene	nad-dehydrogenase	−	117863	119950	2087
ndhH	gene	nad-dehydrogenase	−	119951	121187	1236
rps15	gene	ribosomal-protein	−	121232	121505	273
ycf1	gene	other	−	121935	127566	5631
trnN-GUU	gene	translation-rna	+	127784	127856	72
trnR-ACG	gene	translation-rna	−	128380	128454	74
rrn5	gene	ribosomal-rna	−	128697	128818	121
rrn4.5	gene	ribosomal-rna	−	129078	129181	103
rrn23	gene	ribosomal-rna	−	129279	132090	2811
trnA-UGC	gene	translation-rna	−	132260	133138	878
trnI-GAU	gene	translation-rna	−	133208	134227	1019
rrn16	gene	ribosomal-rna	−	134525	136016	1491
trnV-GAC	gene	translation-rna	−	136242	136314	72
rps7	gene	ribosomal-protein	+	138797	139265	468
ndhB	gene	nad-dehydrogenase	+	139530	141738	2208
trnL-CAA	gene	translation-rna	+	142309	142390	81
ycf15	gene	other	−	142645	142894	249
ycf2	gene	other	−	142984	149770	6786
trnI-CAU	gene	translation-rna	+	149858	149932	74
rpl23	gene	ribosomal-protein	+	150097	150379	282
rpl2	gene	ribosomal-protein	+	150397	151887	1490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_050943.1DNA · accDNC_050943DNA · atpBNC_050943DNA · matKNC_050943DNA · ndhFNC_050943DNA · psbANC_050943DNA · rbcLNC_050943DNA · rps12NC_050943DNA · ycf1NC_050943