Coordinate-aware organelle record

Colquhounia coccinea var. mollis chloroplast genome

Available MN165115.1 151,965 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
psbA	gene	photosystem-ii	−	29	1088	1059
trnK-UUU	gene	translation-rna	−	1320	3910	2590
matK	gene	other	−	1624	3160	1536
rps16	gene	ribosomal-protein	−	4681	5822	1141
trnQ-UUG	gene	translation-rna	−	6979	7052	73
psbK	gene	photosystem-ii	+	7388	7574	186
psbI	gene	photosystem-ii	+	7951	8062	111
trnS-GCU	gene	translation-rna	−	8185	8273	88
trnG-GCC	gene	translation-rna	+	8964	9725	761
trnR-UCU	gene	translation-rna	+	9902	9974	72
atpA	gene	atp-synthase	−	10070	11594	1524
atpF	gene	atp-synthase	−	11682	12907	1225
atpH	gene	atp-synthase	−	13276	13522	246
atpI	gene	atp-synthase	−	14538	15282	744
rps2	gene	ribosomal-protein	−	15512	16223	711
rpoC2	gene	rna-polymerase	−	16443	20634	4191
rpoC1	gene	rna-polymerase	−	20788	23627	2839
rpoB	gene	rna-polymerase	−	23653	26866	3213
trnC-GCA	gene	translation-rna	+	28033	28114	81
petN	gene	cytochrome	+	28939	29035	96
psbM	gene	photosystem-ii	−	29824	29929	105
trnD-GUC	gene	translation-rna	−	30452	30526	74
trnY-GUA	gene	translation-rna	−	30640	30724	84
trnE-UUC	gene	translation-rna	−	30783	30856	73
trnT-GGU	gene	translation-rna	+	31416	31488	72
psbD	gene	photosystem-ii	+	32713	33775	1062
psbC	gene	photosystem-ii	+	33722	35144	1422
trnS-UGA	gene	translation-rna	−	35374	35467	93
lhbA	gene	other	+	35792	35981	189
trnG-UCC	gene	translation-rna	+	36204	36275	71
trnfM-CAU	gene	translation-rna	−	36424	36498	74
rps14	gene	ribosomal-protein	−	36647	36950	303
psaB	gene	photosystem-i	−	37077	39282	2205
psaA	gene	photosystem-i	−	39307	41560	2253
ycf3	gene	other	−	42288	44235	1947
trnS-GGA	gene	translation-rna	+	44561	44648	87
rps4	gene	ribosomal-protein	−	44937	45543	606
trnT-UGU	gene	translation-rna	−	45935	46008	73
trnL-UAA	gene	translation-rna	+	46688	47262	574
trnF-GAA	gene	translation-rna	+	47561	47634	73
ndhJ	gene	nad-dehydrogenase	−	48298	48793	495
ndhK	gene	nad-dehydrogenase	−	48875	49727	852
ndhC	gene	nad-dehydrogenase	−	49606	49969	363
trnV-UAC	gene	translation-rna	−	50913	51566	653
trnM-CAU	gene	translation-rna	+	51755	51827	72
atpE	gene	atp-synthase	−	52051	52453	402
atpB	gene	atp-synthase	−	52449	53946	1497
rbcL	gene	other	+	54734	56201	1467
accD	gene	other	+	56890	58357	1467
psaI	gene	photosystem-i	+	59043	59154	111
ycf4	gene	other	+	59587	60142	555
cemA	gene	other	+	60697	61387	690
petA	gene	cytochrome	+	61603	62566	963
psbJ	gene	photosystem-ii	−	63617	63740	123
psbL	gene	photosystem-ii	−	63877	63994	117
psbF	gene	photosystem-ii	−	64017	64137	120
psbE	gene	photosystem-ii	−	64151	64403	252
petL	gene	cytochrome	+	64932	65028	96
petG	gene	cytochrome	+	65202	65316	114
trnW-CCA	gene	translation-rna	−	65441	65515	74
trnP-UGG	gene	translation-rna	−	65684	65758	74
psaJ	gene	photosystem-i	+	66033	66168	135
rpl33	gene	ribosomal-protein	+	66638	66839	201
rps18	gene	ribosomal-protein	+	67009	67315	306
rpl20	gene	ribosomal-protein	−	67532	67919	387
rps12	gene	ribosomal-protein	−	68667	96827	28160
rps12	gene	ribosomal-protein	+	68667	138307	69640
clpP	gene	other	−	68920	70798	1878
psbB	gene	photosystem-ii	+	71235	72762	1527
psbT	gene	photosystem-ii	+	72956	73064	108
psbN	gene	photosystem-ii	−	73124	73256	132
psbH	gene	photosystem-ii	+	73359	73581	222
petB	gene	cytochrome	+	73705	75085	1380
petD	gene	cytochrome	+	75279	76493	1214
rpoA	gene	rna-polymerase	−	76655	77669	1014
rps11	gene	ribosomal-protein	−	77740	78172	432
rpl36	gene	ribosomal-protein	−	78259	78373	114
infA	gene	other	−	78468	78702	234
rps8	gene	ribosomal-protein	−	78825	79239	414
rpl14	gene	ribosomal-protein	−	79413	79782	369
rpl16	gene	ribosomal-protein	−	79908	81216	1308
rps3	gene	ribosomal-protein	−	81362	82025	663
rpl22	gene	ribosomal-protein	−	82009	82474	465
rps19	gene	ribosomal-protein	−	82533	82812	279
rpl2	gene	ribosomal-protein	−	82864	84356	1492
rpl23	gene	ribosomal-protein	−	84374	84656	282
trnI-CAU	gene	translation-rna	−	84821	84895	74
ycf2	gene	other	+	84983	91850	6867
trnL-CAA	gene	translation-rna	−	92401	92482	81
ndhB	gene	nad-dehydrogenase	−	93026	95238	2212
rps7	gene	ribosomal-protein	−	95512	95980	468
trnV-GAC	gene	translation-rna	+	98443	98515	72
rrn16	gene	ribosomal-rna	+	98742	100233	1491
trnI-GAU	gene	translation-rna	+	100522	101530	1008
trnA-UGC	gene	translation-rna	+	101594	102473	879
rrn23	gene	ribosomal-rna	+	102665	105475	2810
rrn4.5	gene	ribosomal-rna	+	105573	105676	103
rrn5	gene	ribosomal-rna	+	105931	106052	121
trnR-ACG	gene	translation-rna	+	106286	106360	74
trnN-GUU	gene	translation-rna	−	106932	107004	72
ndhF	gene	nad-dehydrogenase	−	108393	110616	2223
rpl32	gene	ribosomal-protein	+	110948	111125	177
trnL-UAG	gene	translation-rna	+	111851	111931	80
ccsA	gene	other	+	112014	112986	972
ndhD	gene	nad-dehydrogenase	−	113167	114670	1503
psaC	gene	photosystem-i	−	114795	115041	246
ndhE	gene	nad-dehydrogenase	−	115303	115609	306
ndhG	gene	nad-dehydrogenase	−	115824	116355	531
ndhI	gene	nad-dehydrogenase	−	116734	117241	507
ndhA	gene	nad-dehydrogenase	−	117321	119495	2174
ndhH	gene	nad-dehydrogenase	−	119496	120678	1182
rps15	gene	ribosomal-protein	−	120778	121114	336
ycf1	gene	other	−	121452	127011	5559
trnN-GUU	gene	translation-rna	+	127336	127408	72
trnR-ACG	gene	translation-rna	−	127980	128054	74
rrn5	gene	ribosomal-rna	−	128288	128409	121
rrn4.5	gene	ribosomal-rna	−	128664	128767	103
rrn23	gene	ribosomal-rna	−	128865	131675	2810
trnA-UGC	gene	translation-rna	−	131867	132746	879
trnI-GAU	gene	translation-rna	−	132810	133818	1008
rrn16	gene	ribosomal-rna	−	134107	135598	1491
trnV-GAC	gene	translation-rna	−	135825	135897	72
rps7	gene	ribosomal-protein	+	138360	138828	468
ndhB	gene	nad-dehydrogenase	+	139102	141314	2212
trnL-CAA	gene	translation-rna	+	141858	141939	81
ycf2	gene	other	−	142490	149357	6867
trnI-CAU	gene	translation-rna	+	149445	149519	74
rpl23	gene	ribosomal-protein	+	149684	149966	282
rpl2	gene	ribosomal-protein	+	149984	151476	1492
trnH-GUG	gene	translation-rna	−	151571	151646	75

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMN165115.1DNA · accDMN165115DNA · atpBMN165115DNA · matKMN165115DNA · ndhFMN165115DNA · psbAMN165115DNA · rbcLMN165115DNA · rps12MN165115DNA · ycf1MN165115