Craniotome furcata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_054194.1 · 2–75 bp · −
psbA · NC_054194.1 · 436–1,494 bp · −
trnK-UUU · NC_054194.1 · 1,727–4,321 bp · −
matK · NC_054194.1 · 2,029–3,564 bp · −
rps16 · NC_054194.1 · 5,145–6,290 bp · −
trnQ-UUG · NC_054194.1 · 7,037–7,108 bp · −
trnS-GCU · NC_054194.1 · 8,248–8,335 bp · −
atpA · NC_054194.1 · 10,139–11,662 bp · −
atpF · NC_054194.1 · 11,744–12,979 bp · −
atpH · NC_054194.1 · 13,338–13,583 bp · −
atpI · NC_054194.1 · 14,593–15,336 bp · −
rps2 · NC_054194.1 · 15,561–16,271 bp · −
rpoC2 · NC_054194.1 · 16,498–20,688 bp · −
rpoC1 · NC_054194.1 · 20,852–23,680 bp · −
rpoB · NC_054194.1 · 23,707–26,919 bp · −
psbM · NC_054194.1 · 30,070–30,174 bp · −
trnD-GUC · NC_054194.1 · 30,694–30,767 bp · −
trnY-GUA · NC_054194.1 · 30,881–30,964 bp · −
trnE-UUC · NC_054194.1 · 31,024–31,096 bp · −
trnS-UGA · NC_054194.1 · 35,531–35,623 bp · −
trnfM-CAU · NC_054194.1 · 36,582–36,655 bp · −
rps14 · NC_054194.1 · 36,805–37,107 bp · −
psaB · NC_054194.1 · 37,235–39,439 bp · −
psaA · NC_054194.1 · 39,465–41,717 bp · −
ycf3 · NC_054194.1 · 42,443–44,392 bp · −
rps4 · NC_054194.1 · 45,601–46,206 bp · −
trnT-UGU · NC_054194.1 · 46,592–46,664 bp · −
ndhJ · NC_054194.1 · 48,960–49,436 bp · −
ndhK · NC_054194.1 · 49,537–50,298 bp · −
ndhC · NC_054194.1 · 50,268–50,630 bp · −
trnV-UAC · NC_054194.1 · 51,504–52,156 bp · −
atpE · NC_054194.1 · 52,620–53,021 bp · −
atpB · NC_054194.1 · 53,018–54,514 bp · −
psbJ · NC_054194.1 · 64,146–64,268 bp · −
psbL · NC_054194.1 · 64,411–64,527 bp · −
psbF · NC_054194.1 · 64,551–64,670 bp · −
psbE · NC_054194.1 · 64,685–64,936 bp · −
trnW-CCA · NC_054194.1 · 66,311–66,384 bp · −
trnP-UGG · NC_054194.1 · 66,551–66,624 bp · −
rpl20 · NC_054194.1 · 68,356–68,742 bp · −
rps12 · NC_054194.1 · 69,514–69,627 bp · −
rps12 · NC_054194.1 · 96,938–97,731 bp · −
clpP · NC_054194.1 · 69,757–71,691 bp · −
psbN · NC_054194.1 · 74,014–74,145 bp · −
rpoA · NC_054194.1 · 77,551–78,564 bp · −
rps11 · NC_054194.1 · 78,636–79,052 bp · −
rpl36 · NC_054194.1 · 79,155–79,268 bp · −
infA · NC_054194.1 · 79,364–79,597 bp · −
rps8 · NC_054194.1 · 79,721–80,134 bp · −
rpl14 · NC_054194.1 · 80,328–80,696 bp · −
rpl16 · NC_054194.1 · 80,823–82,143 bp · −
rps3 · NC_054194.1 · 82,283–82,945 bp · −
rpl22 · NC_054194.1 · 82,930–83,394 bp · −
rps19 · NC_054194.1 · 83,454–83,732 bp · −
rpl2 · NC_054194.1 · 83,787–85,278 bp · −
rpl23 · NC_054194.1 · 85,297–85,578 bp · −
trnI-CAU · NC_054194.1 · 85,744–85,817 bp · −
trnL-CAA · NC_054194.1 · 93,306–93,386 bp · −
ndhB · NC_054194.1 · 93,931–96,142 bp · −
rps7 · NC_054194.1 · 96,417–96,884 bp · −
trnN-GUU · NC_054194.1 · 107,789–107,860 bp · −
ndhF · NC_054194.1 · 109,259–111,481 bp · −
ndhD · NC_054194.1 · 114,216–115,736 bp · −
psaC · NC_054194.1 · 115,840–116,085 bp · −
ndhE · NC_054194.1 · 116,364–116,666 bp · −
ndhG · NC_054194.1 · 116,884–117,414 bp · −
ndhI · NC_054194.1 · 117,767–118,273 bp · −
ndhA · NC_054194.1 · 118,354–120,513 bp · −
ndhH · NC_054194.1 · 120,515–121,696 bp · −
rps15 · NC_054194.1 · 121,797–122,069 bp · −
ycf1 · NC_054194.1 · 122,477–128,128 bp · −
trnR-ACG · NC_054194.1 · 128,995–129,068 bp · −
rrn5 · NC_054194.1 · 129,307–129,427 bp · −
rrn4.5 · NC_054194.1 · 129,683–129,785 bp · −
rrn23 · NC_054194.1 · 129,886–132,694 bp · −
trnA-UGC · NC_054194.1 · 132,879–133,758 bp · −
trnI-GAU · NC_054194.1 · 133,823–134,830 bp · −
rrn16 · NC_054194.1 · 135,120–136,610 bp · −
trnV-GAC · NC_054194.1 · 136,837–136,908 bp · −
ycf2 · NC_054194.1 · 143,458–150,306 bp · −
psbK · NC_054194.1 · 7,445–7,630 bp · +
psbI · NC_054194.1 · 8,011–8,121 bp · +
trnG-UCC · NC_054194.1 · 9,026–9,784 bp · +
trnR-UCU · NC_054194.1 · 9,971–10,042 bp · +
trnC-GCA · NC_054194.1 · 28,086–28,156 bp · +
petN · NC_054194.1 · 28,997–29,086 bp · +
trnT-GGU · NC_054194.1 · 31,652–31,723 bp · +
psbD · NC_054194.1 · 32,862–33,923 bp · +
psbC · NC_054194.1 · 33,871–35,292 bp · +
psbZ · NC_054194.1 · 35,950–36,138 bp · +
trnG-GCC · NC_054194.1 · 36,359–36,429 bp · +
trnS-GGA · NC_054194.1 · 45,241–45,327 bp · +
trnL-UAA · NC_054194.1 · 47,354–47,927 bp · +
trnF-GAA · NC_054194.1 · 48,222–48,294 bp · +
trnM-CAU · NC_054194.1 · 52,337–52,409 bp · +
rbcL · NC_054194.1 · 55,303–56,775 bp · +
accD · NC_054194.1 · 57,477–58,964 bp · +
psaI · NC_054194.1 · 59,597–59,707 bp · +
ycf4 · NC_054194.1 · 60,142–60,696 bp · +
cemA · NC_054194.1 · 61,247–61,936 bp · +
petA · NC_054194.1 · 62,154–63,116 bp · +
petL · NC_054194.1 · 65,797–65,892 bp · +
petG · NC_054194.1 · 66,067–66,180 bp · +
psaJ · NC_054194.1 · 66,884–67,018 bp · +
rpl33 · NC_054194.1 · 67,471–67,671 bp · +
rps18 · NC_054194.1 · 67,839–68,144 bp · +
rps12 · NC_054194.1 · 138,481–139,274 bp · +
psbB · NC_054194.1 · 72,132–73,658 bp · +
psbT · NC_054194.1 · 73,846–73,953 bp · +
psbH · NC_054194.1 · 74,249–74,470 bp · +
petB · NC_054194.1 · 74,595–75,972 bp · +
petD · NC_054194.1 · 76,159–77,388 bp · +
ycf2 · NC_054194.1 · 85,906–92,754 bp · +
trnV-GAC · NC_054194.1 · 99,304–99,375 bp · +
rrn16 · NC_054194.1 · 99,602–101,092 bp · +
trnI-GAU · NC_054194.1 · 101,382–102,389 bp · +
trnA-UGC · NC_054194.1 · 102,454–103,333 bp · +
rrn23 · NC_054194.1 · 103,518–106,326 bp · +
rrn4.5 · NC_054194.1 · 106,427–106,529 bp · +
rrn5 · NC_054194.1 · 106,785–106,905 bp · +
trnR-ACG · NC_054194.1 · 107,144–107,217 bp · +
rpl32 · NC_054194.1 · 111,959–112,135 bp · +
trnL-UAG · NC_054194.1 · 112,905–112,984 bp · +
ccsA · NC_054194.1 · 113,068–114,039 bp · +
trnN-GUU · NC_054194.1 · 128,352–128,423 bp · +
rps7 · NC_054194.1 · 139,328–139,795 bp · +
ndhB · NC_054194.1 · 140,070–142,281 bp · +
trnL-CAA · NC_054194.1 · 142,826–142,906 bp · +
trnI-CAU · NC_054194.1 · 150,395–150,468 bp · +
rpl23 · NC_054194.1 · 150,634–150,915 bp · +
rpl2 · NC_054194.1 · 150,934–152,425 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Craniotome furcata
ANNOTATED PLASTOME
NC_054194.1
152,521 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38130 76260 114391 152521 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 436 1494 1059 Locate
trnK-UUU gene − 1727 4321 2595 Locate
matK gene − 2029 3564 1536 Locate
rps16 gene − 5145 6290 1146 Locate
trnQ-UUG gene − 7037 7108 72 Locate
psbK gene + 7445 7630 186 Locate
psbI gene + 8011 8121 111 Locate
trnS-GCU gene − 8248 8335 88 Locate
trnG-UCC gene + 9026 9784 759 Locate
trnR-UCU gene + 9971 10042 72 Locate
atpA gene − 10139 11662 1524 Locate
atpF gene − 11744 12979 1236 Locate
atpH gene − 13338 13583 246 Locate
atpI gene − 14593 15336 744 Locate
rps2 gene − 15561 16271 711 Locate
rpoC2 gene − 16498 20688 4191 Locate
rpoC1 gene − 20852 23680 2829 Locate
rpoB gene − 23707 26919 3213 Locate
trnC-GCA gene + 28086 28156 71 Locate
petN gene + 28997 29086 90 Locate
psbM gene − 30070 30174 105 Locate
trnD-GUC gene − 30694 30767 74 Locate
trnY-GUA gene − 30881 30964 84 Locate
trnE-UUC gene − 31024 31096 73 Locate
trnT-GGU gene + 31652 31723 72 Locate
psbD gene + 32862 33923 1062 Locate
psbC gene + 33871 35292 1422 Locate
trnS-UGA gene − 35531 35623 93 Locate
psbZ gene + 35950 36138 189 Locate
trnG-GCC gene + 36359 36429 71 Locate
trnfM-CAU gene − 36582 36655 74 Locate
rps14 gene − 36805 37107 303 Locate
psaB gene − 37235 39439 2205 Locate
psaA gene − 39465 41717 2253 Locate
ycf3 gene − 42443 44392 1950 Locate
trnS-GGA gene + 45241 45327 87 Locate
rps4 gene − 45601 46206 606 Locate
trnT-UGU gene − 46592 46664 73 Locate
trnL-UAA gene + 47354 47927 574 Locate
trnF-GAA gene + 48222 48294 73 Locate
ndhJ gene − 48960 49436 477 Locate
ndhK gene − 49537 50298 762 Locate
ndhC gene − 50268 50630 363 Locate
trnV-UAC gene − 51504 52156 653 Locate
trnM-CAU gene + 52337 52409 73 Locate
atpE gene − 52620 53021 402 Locate
atpB gene − 53018 54514 1497 Locate
rbcL gene + 55303 56775 1473 Locate
accD gene + 57477 58964 1488 Locate
psaI gene + 59597 59707 111 Locate
ycf4 gene + 60142 60696 555 Locate
cemA gene + 61247 61936 690 Locate
petA gene + 62154 63116 963 Locate
psbJ gene − 64146 64268 123 Locate
psbL gene − 64411 64527 117 Locate
psbF gene − 64551 64670 120 Locate
psbE gene − 64685 64936 252 Locate
petL gene + 65797 65892 96 Locate
petG gene + 66067 66180 114 Locate
trnW-CCA gene − 66311 66384 74 Locate
trnP-UGG gene − 66551 66624 74 Locate
psaJ gene + 66884 67018 135 Locate
rpl33 gene + 67471 67671 201 Locate
rps18 gene + 67839 68144 306 Locate
rpl20 gene − 68356 68742 387 Locate
rps12 gene − 69514 69627 114 Locate
clpP gene − 69757 71691 1935 Locate
psbB gene + 72132 73658 1527 Locate
psbT gene + 73846 73953 108 Locate
psbN gene − 74014 74145 132 Locate
psbH gene + 74249 74470 222 Locate
petB gene + 74595 75972 1378 Locate
petD gene + 76159 77388 1230 Locate
rpoA gene − 77551 78564 1014 Locate
rps11 gene − 78636 79052 417 Locate
rpl36 gene − 79155 79268 114 Locate
infA gene − 79364 79597 234 Locate
rps8 gene − 79721 80134 414 Locate
rpl14 gene − 80328 80696 369 Locate
rpl16 gene − 80823 82143 1321 Locate
rps3 gene − 82283 82945 663 Locate
rpl22 gene − 82930 83394 465 Locate
rps19 gene − 83454 83732 279 Locate
rpl2 gene − 83787 85278 1492 Locate
rpl23 gene − 85297 85578 282 Locate
trnI-CAU gene − 85744 85817 74 Locate
ycf2 gene + 85906 92754 6849 Locate
trnL-CAA gene − 93306 93386 81 Locate
ndhB gene − 93931 96142 2212 Locate
rps7 gene − 96417 96884 468 Locate
rps12 gene − 96938 97731 794 Locate
trnV-GAC gene + 99304 99375 72 Locate
rrn16 gene + 99602 101092 1491 Locate
trnI-GAU gene + 101382 102389 1008 Locate
trnA-UGC gene + 102454 103333 880 Locate
rrn23 gene + 103518 106326 2809 Locate
rrn4.5 gene + 106427 106529 103 Locate
rrn5 gene + 106785 106905 121 Locate
trnR-ACG gene + 107144 107217 74 Locate
trnN-GUU gene − 107789 107860 72 Locate
ndhF gene − 109259 111481 2223 Locate
rpl32 gene + 111959 112135 177 Locate
trnL-UAG gene + 112905 112984 80 Locate
ccsA gene + 113068 114039 972 Locate
ndhD gene − 114216 115736 1521 Locate
psaC gene − 115840 116085 246 Locate
ndhE gene − 116364 116666 303 Locate
ndhG gene − 116884 117414 531 Locate
ndhI gene − 117767 118273 507 Locate
ndhA gene − 118354 120513 2160 Locate
ndhH gene − 120515 121696 1182 Locate
rps15 gene − 121797 122069 273 Locate
ycf1 gene − 122477 128128 5652 Locate
trnN-GUU gene + 128352 128423 72 Locate
trnR-ACG gene − 128995 129068 74 Locate
rrn5 gene − 129307 129427 121 Locate
rrn4.5 gene − 129683 129785 103 Locate
rrn23 gene − 129886 132694 2809 Locate
trnA-UGC gene − 132879 133758 880 Locate
trnI-GAU gene − 133823 134830 1008 Locate
rrn16 gene − 135120 136610 1491 Locate
trnV-GAC gene − 136837 136908 72 Locate
rps12 gene + 138481 139274 794 Locate
rps7 gene + 139328 139795 468 Locate
ndhB gene + 140070 142281 2212 Locate
trnL-CAA gene + 142826 142906 81 Locate
ycf2 gene − 143458 150306 6849 Locate
trnI-CAU gene + 150395 150468 74 Locate
rpl23 gene + 150634 150915 282 Locate
rpl2 gene + 150934 152425 1492 Locate
Status Available
Accession NC_054194.1
Length 152,521 bp
GC content 38.3%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources