Coordinate-aware organelle record

Dicrastylis parvifolia chloroplast genome

Available NC_058335.1 153,121 bp 136 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 3-77 bp · − strandpsbA · gene · 386-1,444 bp · − strandmatK · gene · 1,961-3,496 bp · − strandrps16 · gene · 5,156-6,286 bp · − strandtrnQ-UUG · gene · 7,347-7,418 bp · − strandpsbK · gene · 7,740-7,949 bp · + strandpsbI · gene · 8,341-8,451 bp · + strandtrnS-GCU · gene · 8,574-8,661 bp · − strandtrnG-UCC · gene · 9,398-10,153 bp · + strandtrnR-UCU · gene · 10,339-10,410 bp · + strandatpA · gene · 10,507-12,030 bp · − strandatpF · gene · 12,112-13,361 bp · − strandatpH · gene · 13,730-13,975 bp · − strandatpI · gene · 14,937-15,686 bp · − strandrps2 · gene · 15,923-16,633 bp · − strandrpoC · gene · 16,850-21,031 bp · − strandrpoC1 · gene · 21,187-24,001 bp · − strandrpoB · gene · 24,028-27,216 bp · − strandtrnC-GCA · gene · 28,431-28,501 bp · + strandpetN · gene · 29,327-29,416 bp · + strandpsbM · gene · 30,397-30,501 bp · − strandtrnD-GUC · gene · 31,032-31,105 bp · − strandtrnY-GUA · gene · 31,217-31,300 bp · − strandtrnE-UUC · gene · 31,360-31,432 bp · − strandtrnT-GGU · gene · 31,988-32,059 bp · + strandpsbD · gene · 33,422-34,483 bp · + strandpsbC · gene · 34,431-35,852 bp · + strandtrnS-UGA · gene · 36,095-36,187 bp · − strandpsbZ · gene · 36,509-36,697 bp · + strandtrnG-GCC · gene · 36,989-37,059 bp · + strandtrnfM-CAU · gene · 37,220-37,293 bp · − strandrps14 · gene · 37,443-37,745 bp · − strandpsaB · gene · 37,871-40,075 bp · − strandpsaA · gene · 40,101-42,353 bp · − strandycf3 · gene · 43,129-45,080 bp · − strandtrnS-GGA · gene · 45,913-45,999 bp · + strandrps4 · gene · 46,298-46,903 bp · − strandtrnT-UGU · gene · 47,321-47,393 bp · − strandtrnL-UAA · gene · 48,101-48,675 bp · + strandtrnF-GAA · gene · 49,012-49,084 bp · + strandndhJ · gene · 49,729-50,205 bp · − strandndhK · gene · 50,306-50,983 bp · − strandndhC · gene · 51,035-51,397 bp · − strandtrnV-UAC · gene · 52,455-53,107 bp · − strandtrnM-CAU · gene · 53,287-53,359 bp · + strandatpE · gene · 53,576-53,977 bp · − strandatpB · gene · 53,974-55,470 bp · − strandrbcL · gene · 56,249-57,703 bp · + strandaccD · gene · 58,365-59,867 bp · + strandpsaI · gene · 60,571-60,681 bp · + strandycf4 · gene · 61,125-61,679 bp · + strandcemA · gene · 62,326-63,015 bp · + strandpetA · gene · 63,225-64,187 bp · + strandpsbJ · gene · 65,243-65,365 bp · − strandpsbL · gene · 65,501-65,617 bp · − strandpsbF · gene · 65,641-65,760 bp · − strandpsbE · gene · 65,775-66,026 bp · − strandpetL · gene · 66,970-67,065 bp · + strandpetG · gene · 67,241-67,354 bp · + strandtrnW-CCA · gene · 67,474-67,555 bp · − strandtrnP-UGG · gene · 67,719-67,792 bp · − strandpsaJ · gene · 68,203-68,337 bp · + strandrpl33 · gene · 68,838-69,038 bp · + strandrps18 · gene · 69,207-69,512 bp · + strandrpl20 · gene · 69,702-70,088 bp · − strandrps12 · gene · 70,916-98,758 bp · − strandrps12 · gene · 70,916-140,227 bp · + strandclpP · gene · 71,157-73,094 bp · − strandpsbB · gene · 73,567-75,093 bp · + strandpsbT · gene · 75,287-75,394 bp · + strandpsbN · gene · 75,455-75,586 bp · − strandpsbH · gene · 75,674-75,913 bp · + strandpetB · gene · 76,038-77,388 bp · + strandpetD · gene · 77,577-78,795 bp · + strandrpoA · gene · 78,972-79,985 bp · − strandrps11 · gene · 80,053-80,469 bp · − strandrpl36 · gene · 80,571-80,684 bp · − strandinfA · gene · 80,789-81,022 bp · − strandrps8 · gene · 81,146-81,550 bp · − strandrpl14 · gene · 81,732-82,100 bp · − strandrpl16 · gene · 82,227-83,520 bp · − strandrps3 · gene · 83,663-84,319 bp · − strandrpl22 · gene · 84,329-84,769 bp · − strandrps19 · gene · 84,833-85,111 bp · − strandrpl2 · gene · 85,168-86,659 bp · − strandrpl23 · gene · 86,678-86,959 bp · − strandtrnI-CAU · gene · 87,138-87,211 bp · − strandycf2 · gene · 87,316-93,726 bp · + strandycf15 · gene · 93,817-94,069 bp · + strandycf15 · CDS · 93,920-94,069 bp · + strandtrnL-CAA · gene · 94,330-94,410 bp · − strandndhB · CDS · 94,958-97,169 bp · − strandndhB · gene · 94,958-97,170 bp · − strandrps7 · gene · 97,444-97,911 bp · − strandtrnV-GAC · gene · 100,398-100,469 bp · + strandrrn16 · gene · 100,697-102,187 bp · + strandtrnI-GAU · gene · 102,486-103,505 bp · + strandtrnA-UGC · gene · 103,570-104,448 bp · + strandrrn23 · gene · 104,618-107,428 bp · + strandrrn4.5 · gene · 107,527-107,629 bp · + strandrrn5 · gene · 107,885-108,005 bp · + strandtrnR-ACG · gene · 108,249-108,322 bp · + strandtrnN-GUU · gene · 108,885-108,956 bp · − strandycf1 · gene · 109,175-110,416 bp · + strandndhF · gene · 110,413-112,656 bp · − strandrpl32 · gene · 113,161-113,325 bp · + strandtrnL-UAG; trnL-CAA · gene · 113,869-113,948 bp · + strandccsA · gene · 114,038-115,009 bp · + strandndhD · gene · 115,269-116,798 bp · − strandpsaC · gene · 116,896-117,141 bp · − strandndhE · gene · 117,392-117,697 bp · − strandndhG · gene · 117,912-118,442 bp · − strandndhI · gene · 118,795-119,301 bp · − strandndhA · gene · 119,381-121,454 bp · − strandndhH · gene · 121,456-122,637 bp · − strandrps15 · gene · 122,734-123,006 bp · − strandycf1 · gene · 123,426-129,017 bp · − strandtrnN-GUU · gene · 129,236-129,307 bp · + strandtrnR-ACG · gene · 129,870-129,943 bp · − strandrrn5 · gene · 130,187-130,307 bp · − strandrrn4.5 · gene · 130,563-130,665 bp · − strandrrn23 · gene · 130,764-133,574 bp · − strandtrnA-UGC · gene · 133,744-134,622 bp · − strandtrnI-GAU · gene · 134,687-135,706 bp · − strandrrn16 · gene · 136,005-137,495 bp · − strandtrnV-GAC · gene · 137,723-137,794 bp · − strandrps7 · gene · 140,281-140,748 bp · + strandndhB · gene · 141,023-143,234 bp · + strandtrnL-CAA · gene · 143,782-143,862 bp · + strandycf15 · CDS · 144,123-144,272 bp · − strandycf15 · gene · 144,123-144,375 bp · − strandycf2 · gene · 144,466-150,876 bp · − strandtrnI-CAU · gene · 150,981-151,054 bp · + strandrpl23 · gene · 151,233-151,514 bp · + strandrpl2 · gene · 151,533-153,024 bp · + strandrps19 · gene · 153,087-153,116 bp · + strandDicrastylis parvifoliaANNOTATED PLASTOMENC_058335.1153,121 bp · 136 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_058335.1Features: 136 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

136 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−27775
psbAgenephotosystem-ii−38514441059
matKgeneother−196034961536
rps16generibosomal-protein−515562861131
trnQ-UUGgenetranslation-rna−7346741872
psbKgenephotosystem-ii+77397949210
psbIgenephotosystem-ii+83408451111
trnS-GCUgenetranslation-rna−8573866188
trnG-UCCgenetranslation-rna+939710153756
trnR-UCUgenetranslation-rna+103381041072
atpAgeneatp-synthase−10506120301524
atpFgeneatp-synthase−12111133611250
atpHgeneatp-synthase−1372913975246
atpIgeneatp-synthase−1493615686750
rps2generibosomal-protein−1592216633711
rpoCgenerna-polymerase−16849210314182
rpoC1generna-polymerase−21186240012815
rpoBgenerna-polymerase−24027272163189
trnC-GCAgenetranslation-rna+284302850171
petNgenecytochrome+293262941690
psbMgenephotosystem-ii−3039630501105
trnD-GUCgenetranslation-rna−310313110574
trnY-GUAgenetranslation-rna−312163130084
trnE-UUCgenetranslation-rna−313593143273
trnT-GGUgenetranslation-rna+319873205972
psbDgenephotosystem-ii+33421344831062
psbCgenephotosystem-ii+34430358521422
trnS-UGAgenetranslation-rna−360943618793
psbZgenephotosystem-ii+3650836697189
trnG-GCCgenetranslation-rna+369883705971
trnfM-CAUgenetranslation-rna−372193729374
rps14generibosomal-protein−3744237745303
psaBgenephotosystem-i−37870400752205
psaAgenephotosystem-i−40100423532253
ycf3geneother−43128450801952
trnS-GGAgenetranslation-rna+459124599987
rps4generibosomal-protein−4629746903606
trnT-UGUgenetranslation-rna−473204739373
trnL-UAAgenetranslation-rna+4810048675575
trnF-GAAgenetranslation-rna+490114908473
ndhJgenenad-dehydrogenase−4972850205477
ndhKgenenad-dehydrogenase−5030550983678
ndhCgenenad-dehydrogenase−5103451397363
trnV-UACgenetranslation-rna−5245453107653
trnM-CAUgenetranslation-rna+532865335973
atpEgeneatp-synthase−5357553977402
atpBgeneatp-synthase−53973554701497
rbcLgeneother+56248577031455
accDgeneother+58364598671503
psaIgenephotosystem-i+6057060681111
ycf4geneother+6112461679555
cemAgeneother+6232563015690
petAgenecytochrome+6322464187963
psbJgenephotosystem-ii−6524265365123
psbLgenephotosystem-ii−6550065617117
psbFgenephotosystem-ii−6564065760120
psbEgenephotosystem-ii−6577466026252
petLgenecytochrome+669696706596
petGgenecytochrome+6724067354114
trnW-CCAgenetranslation-rna−674736755582
trnP-UGGgenetranslation-rna−677186779274
psaJgenephotosystem-i+6820268337135
rpl33generibosomal-protein+6883769038201
rps18generibosomal-protein+6920669512306
rpl20generibosomal-protein−6970170088387
rps12generibosomal-protein−709159875827843
rps12generibosomal-protein+7091514022769312
clpPgeneother−71156730941938
psbBgenephotosystem-ii+73566750931527
psbTgenephotosystem-ii+7528675394108
psbNgenephotosystem-ii−7545475586132
psbHgenephotosystem-ii+7567375913240
petBgenecytochrome+76037773881351
petDgenecytochrome+77576787951219
rpoAgenerna-polymerase−78971799851014
rps11generibosomal-protein−8005280469417
rpl36generibosomal-protein−8057080684114
infAgeneother−8078881022234
rps8generibosomal-protein−8114581550405
rpl14generibosomal-protein−8173182100369
rpl16generibosomal-protein−82226835201294
rps3generibosomal-protein−8366284319657
rpl22generibosomal-protein−8432884769441
rps19generibosomal-protein−8483285111279
rpl2generibosomal-protein−85167866591492
rpl23generibosomal-protein−8667786959282
trnI-CAUgenetranslation-rna−871378721174
ycf2geneother+87315937266411
ycf15geneother+9381694069253
ycf15CDSother+9391994069150
trnL-CAAgenetranslation-rna−943299441081
ndhBCDSnad-dehydrogenase−94957971692212
ndhBgenenad-dehydrogenase−94957971702213
rps7generibosomal-protein−9744397911468
trnV-GACgenetranslation-rna+10039710046972
rrn16generibosomal-rna+1006961021871491
trnI-GAUgenetranslation-rna+1024851035051020
trnA-UGCgenetranslation-rna+103569104448879
rrn23generibosomal-rna+1046171074282811
rrn4.5generibosomal-rna+107526107629103
rrn5generibosomal-rna+107884108005121
trnR-ACGgenetranslation-rna+10824810832274
trnN-GUUgenetranslation-rna−10888410895672
ycf1geneother+1091741104161242
ndhFgenenad-dehydrogenase−1104121126562244
rpl32generibosomal-protein+113160113325165
trnL-UAG; trnL-CAAgenetranslation-rna+11386811394880
ccsAgeneother+114037115009972
ndhDgenenad-dehydrogenase−1152681167981530
psaCgenephotosystem-i−116895117141246
ndhEgenenad-dehydrogenase−117391117697306
ndhGgenenad-dehydrogenase−117911118442531
ndhIgenenad-dehydrogenase−118794119301507
ndhAgenenad-dehydrogenase−1193801214542074
ndhHgenenad-dehydrogenase−1214551226371182
rps15generibosomal-protein−122733123006273
ycf1geneother−1234251290175592
trnN-GUUgenetranslation-rna+12923512930772
trnR-ACGgenetranslation-rna−12986912994374
rrn5generibosomal-rna−130186130307121
rrn4.5generibosomal-rna−130562130665103
rrn23generibosomal-rna−1307631335742811
trnA-UGCgenetranslation-rna−133743134622879
trnI-GAUgenetranslation-rna−1346861357061020
rrn16generibosomal-rna−1360041374951491
trnV-GACgenetranslation-rna−13772213779472
rps7generibosomal-protein+140280140748468
ndhBgenenad-dehydrogenase+1410221432342212
trnL-CAAgenetranslation-rna+14378114386281
ycf15CDSother−144122144272150
ycf15geneother−144122144375253
ycf2geneother−1444651508766411
trnI-CAUgenetranslation-rna+15098015105474
rpl23generibosomal-protein+151232151514282
rpl2generibosomal-protein+1515321530241492
rps19generibosomal-protein+15308615311630

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources