Dracocephalum ruyschiana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ963003.1 · 5–80 bp · −
psbA · PQ963003.1 · 426–1,484 bp · −
trnK-UUU · PQ963003.1 · 1,716–4,320 bp · −
matK · PQ963003.1 · 2,016–3,581 bp · −
rps16 · PQ963003.1 · 4,577–5,682 bp · −
trnQ-UUG · PQ963003.1 · 6,682–6,753 bp · −
trnS-GCU · PQ963003.1 · 7,961–8,048 bp · −
atpA · PQ963003.1 · 9,845–11,368 bp · −
atpF · PQ963003.1 · 11,480–12,727 bp · −
atpH · PQ963003.1 · 13,004–13,249 bp · −
atpI · PQ963003.1 · 14,294–15,037 bp · −
rps2 · PQ963003.1 · 15,261–15,971 bp · −
rpoC2 · PQ963003.1 · 16,176–20,363 bp · −
rpoC1 · PQ963003.1 · 20,524–23,345 bp · −
rpoB · PQ963003.1 · 23,372–26,584 bp · −
psbM · PQ963003.1 · 28,875–28,979 bp · −
trnD-GUC · PQ963003.1 · 29,500–29,573 bp · −
trnY-GUA · PQ963003.1 · 29,690–29,773 bp · −
trnE-UUC · PQ963003.1 · 29,839–29,911 bp · −
trnS-UGA · PQ963003.1 · 34,042–34,134 bp · −
trnfM-CAU · PQ963003.1 · 35,223–35,296 bp · −
rps14 · PQ963003.1 · 35,453–35,755 bp · −
psaB · PQ963003.1 · 35,892–38,096 bp · −
psaA · PQ963003.1 · 38,122–40,374 bp · −
ycf3 · PQ963003.1 · 41,142–43,095 bp · −
rps4 · PQ963003.1 · 44,343–44,948 bp · −
trnT-UGU · PQ963003.1 · 45,341–45,413 bp · −
ndhJ · PQ963003.1 · 47,770–48,246 bp · −
ndhK · PQ963003.1 · 48,365–49,042 bp · −
ndhC · PQ963003.1 · 49,094–49,456 bp · −
trnV-UAC · PQ963003.1 · 50,408–51,061 bp · −
atpE · PQ963003.1 · 51,514–51,915 bp · −
atpB · PQ963003.1 · 51,912–53,408 bp · −
psbJ · PQ963003.1 · 62,978–63,100 bp · −
psbL · PQ963003.1 · 63,243–63,464 bp · −
psbF · PQ963003.1 · 63,383–63,502 bp · −
psbE · PQ963003.1 · 63,517–63,768 bp · −
trnW-CCA · PQ963003.1 · 65,137–65,210 bp · −
trnP-UGG · PQ963003.1 · 65,370–65,443 bp · −
rpl20 · PQ963003.1 · 67,206–67,568 bp · −
rps12 · PQ963003.1 · 68,374–68,487 bp · −
rps12 · PQ963003.1 · 95,756–96,549 bp · −
clpP1 · PQ963003.1 · 68,627–70,533 bp · −
pbf1 · PQ963003.1 · 72,816–72,947 bp · −
rpoA · PQ963003.1 · 76,331–77,338 bp · −
rps11 · PQ963003.1 · 77,410–77,826 bp · −
rpl36 · PQ963003.1 · 77,936–78,049 bp · −
infA · PQ963003.1 · 78,145–78,378 bp · −
rps8 · PQ963003.1 · 78,501–78,905 bp · −
rpl14 · PQ963003.1 · 79,093–79,461 bp · −
rpl16 · PQ963003.1 · 79,607–80,899 bp · −
rps3 · PQ963003.1 · 81,050–81,712 bp · −
rpl22 · PQ963003.1 · 81,725–82,171 bp · −
rps19 · PQ963003.1 · 82,240–82,518 bp · −
rpl2 · PQ963003.1 · 82,573–84,064 bp · −
rpl23 · PQ963003.1 · 84,083–84,316 bp · −
trnM-CAU · PQ963003.1 · 84,526–84,599 bp · −
trnL-CAA · PQ963003.1 · 92,115–92,195 bp · −
ndhB · PQ963003.1 · 92,760–94,915 bp · −
rps7 · PQ963003.1 · 95,235–95,702 bp · −
trnN-GUU · PQ963003.1 · 106,631–106,703 bp · −
ndhF · PQ963003.1 · 107,760–110,003 bp · −
ndhD · PQ963003.1 · 112,771–114,273 bp · −
psaC · PQ963003.1 · 114,397–114,642 bp · −
ndhE · PQ963003.1 · 114,891–115,193 bp · −
ndhG · PQ963003.1 · 115,440–115,970 bp · −
ndhI · PQ963003.1 · 116,079–116,615 bp · −
ndhA · PQ963003.1 · 116,666–118,771 bp · −
ndhH · PQ963003.1 · 118,773–120,008 bp · −
rps15 · PQ963003.1 · 120,054–120,326 bp · −
ycf1 · PQ963003.1 · 120,720–126,395 bp · −
trnR-ACG · PQ963003.1 · 127,210–127,283 bp · −
rrn5 · PQ963003.1 · 127,532–127,652 bp · −
rrn4.5 · PQ963003.1 · 127,913–128,015 bp · −
rrn23 · PQ963003.1 · 128,114–130,924 bp · −
trnA-UGC · PQ963003.1 · 131,084–131,958 bp · −
trnI-GAU · PQ963003.1 · 132,023–133,041 bp · −
rrn16 · PQ963003.1 · 133,340–134,830 bp · −
trnV-GAC · PQ963003.1 · 135,059–135,130 bp · −
ycf15 · PQ963003.1 · 141,463–141,660 bp · −
ycf2 · PQ963003.1 · 141,802–148,629 bp · −
psbK · PQ963003.1 · 7,146–7,331 bp · +
psbI · PQ963003.1 · 7,738–7,848 bp · +
trnG-UCC · PQ963003.1 · 8,738–9,490 bp · +
trnR-UCU · PQ963003.1 · 9,670–9,741 bp · +
trnC-GCA · PQ963003.1 · 27,646–27,718 bp · +
petN · PQ963003.1 · 27,877–27,966 bp · +
trnT-GGU · PQ963003.1 · 30,464–30,535 bp · +
psbD · PQ963003.1 · 31,362–32,423 bp · +
psbC · PQ963003.1 · 32,371–33,792 bp · +
psbZ · PQ963003.1 · 34,480–34,668 bp · +
trnG-GCC · PQ963003.1 · 34,979–35,051 bp · +
trnS-GGA · PQ963003.1 · 43,953–44,039 bp · +
trnL-UAA · PQ963003.1 · 46,176–46,767 bp · +
trnF-GAA · PQ963003.1 · 47,063–47,135 bp · +
trnM-CAU · PQ963003.1 · 51,242–51,314 bp · +
rbcL · PQ963003.1 · 54,178–55,632 bp · +
accD · PQ963003.1 · 56,307–57,839 bp · +
psaI · PQ963003.1 · 58,296–58,406 bp · +
ycf4 · PQ963003.1 · 58,858–59,412 bp · +
cemA · PQ963003.1 · 60,070–60,759 bp · +
petA · PQ963003.1 · 60,984–61,946 bp · +
petL · PQ963003.1 · 64,640–64,735 bp · +
petG · PQ963003.1 · 64,912–65,025 bp · +
psaJ · PQ963003.1 · 65,745–65,879 bp · +
rpl33 · PQ963003.1 · 66,299–66,499 bp · +
rps18 · PQ963003.1 · 66,755–66,964 bp · +
rps12 · PQ963003.1 · 136,768–137,561 bp · +
psbB · PQ963003.1 · 71,001–72,527 bp · +
psbT · PQ963003.1 · 72,648–72,755 bp · +
psbH · PQ963003.1 · 73,053–73,274 bp · +
petB · PQ963003.1 · 73,406–74,767 bp · +
petD · PQ963003.1 · 74,969–76,160 bp · +
ycf2 · PQ963003.1 · 84,688–91,515 bp · +
ycf15 · PQ963003.1 · 91,657–91,854 bp · +
trnV-GAC · PQ963003.1 · 98,187–98,258 bp · +
rrn16 · PQ963003.1 · 98,487–99,977 bp · +
trnI-GAU · PQ963003.1 · 100,276–101,294 bp · +
trnA-UGC · PQ963003.1 · 101,359–102,233 bp · +
rrn23 · PQ963003.1 · 102,393–105,203 bp · +
rrn4.5 · PQ963003.1 · 105,302–105,404 bp · +
rrn5 · PQ963003.1 · 105,665–105,785 bp · +
trnR-ACG · PQ963003.1 · 106,034–106,107 bp · +
rpl32 · PQ963003.1 · 110,473–110,643 bp · +
trnL-UAG · PQ963003.1 · 111,388–111,467 bp · +
ccsA · PQ963003.1 · 111,556–112,533 bp · +
trnN-GUU · PQ963003.1 · 126,614–126,686 bp · +
rps7 · PQ963003.1 · 137,615–138,082 bp · +
ndhB · PQ963003.1 · 138,402–140,557 bp · +
trnL-CAA · PQ963003.1 · 141,122–141,202 bp · +
trnM-CAU · PQ963003.1 · 148,718–148,791 bp · +
rpl23 · PQ963003.1 · 149,001–149,234 bp · +
rpl2 · PQ963003.1 · 149,253–150,744 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Dracocephalum ruyschiana
ANNOTATED PLASTOME
PQ963003.1
150,896 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37724 75448 113172 150896 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 5 80 76 Locate
psbA gene − 426 1484 1059 Locate
trnK-UUU gene − 1716 4320 2605 Locate
matK gene − 2016 3581 1566 Locate
rps16 gene − 4577 5682 1106 Locate
trnQ-UUG gene − 6682 6753 72 Locate
psbK gene + 7146 7331 186 Locate
psbI gene + 7738 7848 111 Locate
trnS-GCU gene − 7961 8048 88 Locate
trnG-UCC gene + 8738 9490 753 Locate
trnR-UCU gene + 9670 9741 72 Locate
atpA gene − 9845 11368 1524 Locate
atpF gene − 11480 12727 1248 Locate
atpH gene − 13004 13249 246 Locate
atpI gene − 14294 15037 744 Locate
rps2 gene − 15261 15971 711 Locate
rpoC2 gene − 16176 20363 4188 Locate
rpoC1 gene − 20524 23345 2822 Locate
rpoB gene − 23372 26584 3213 Locate
trnC-GCA gene + 27646 27718 73 Locate
petN gene + 27877 27966 90 Locate
psbM gene − 28875 28979 105 Locate
trnD-GUC gene − 29500 29573 74 Locate
trnY-GUA gene − 29690 29773 84 Locate
trnE-UUC gene − 29839 29911 73 Locate
trnT-GGU gene + 30464 30535 72 Locate
psbD gene + 31362 32423 1062 Locate
psbC gene + 32371 33792 1422 Locate
trnS-UGA gene − 34042 34134 93 Locate
psbZ gene + 34480 34668 189 Locate
trnG-GCC gene + 34979 35051 73 Locate
trnfM-CAU gene − 35223 35296 74 Locate
rps14 gene − 35453 35755 303 Locate
psaB gene − 35892 38096 2205 Locate
psaA gene − 38122 40374 2253 Locate
ycf3 gene − 41142 43095 1954 Locate
trnS-GGA gene + 43953 44039 87 Locate
rps4 gene − 44343 44948 606 Locate
trnT-UGU gene − 45341 45413 73 Locate
trnL-UAA gene + 46176 46767 592 Locate
trnF-GAA gene + 47063 47135 73 Locate
ndhJ gene − 47770 48246 477 Locate
ndhK gene − 48365 49042 678 Locate
ndhC gene − 49094 49456 363 Locate
trnV-UAC gene − 50408 51061 654 Locate
trnM-CAU gene + 51242 51314 73 Locate
atpE gene − 51514 51915 402 Locate
atpB gene − 51912 53408 1497 Locate
rbcL gene + 54178 55632 1455 Locate
accD gene + 56307 57839 1533 Locate
psaI gene + 58296 58406 111 Locate
ycf4 gene + 58858 59412 555 Locate
cemA gene + 60070 60759 690 Locate
petA gene + 60984 61946 963 Locate
psbJ gene − 62978 63100 123 Locate
psbL gene − 63243 63464 222 Locate
psbF gene − 63383 63502 120 Locate
psbE gene − 63517 63768 252 Locate
petL gene + 64640 64735 96 Locate
petG gene + 64912 65025 114 Locate
trnW-CCA gene − 65137 65210 74 Locate
trnP-UGG gene − 65370 65443 74 Locate
psaJ gene + 65745 65879 135 Locate
rpl33 gene + 66299 66499 201 Locate
rps18 gene + 66755 66964 210 Locate
rpl20 gene − 67206 67568 363 Locate
rps12 gene − 68374 68487 114 Locate
clpP1 gene − 68627 70533 1907 Locate
psbB gene + 71001 72527 1527 Locate
psbT gene + 72648 72755 108 Locate
pbf1 gene − 72816 72947 132 Locate
psbH gene + 73053 73274 222 Locate
petB gene + 73406 74767 1362 Locate
petD gene + 74969 76160 1192 Locate
rpoA gene − 76331 77338 1008 Locate
rps11 gene − 77410 77826 417 Locate
rpl36 gene − 77936 78049 114 Locate
infA gene − 78145 78378 234 Locate
rps8 gene − 78501 78905 405 Locate
rpl14 gene − 79093 79461 369 Locate
rpl16 gene − 79607 80899 1293 Locate
rps3 gene − 81050 81712 663 Locate
rpl22 gene − 81725 82171 447 Locate
rps19 gene − 82240 82518 279 Locate
rpl2 gene − 82573 84064 1492 Locate
rpl23 gene − 84083 84316 234 Locate
trnM-CAU gene − 84526 84599 74 Locate
ycf2 gene + 84688 91515 6828 Locate
ycf15 gene + 91657 91854 198 Locate
trnL-CAA gene − 92115 92195 81 Locate
ndhB gene − 92760 94915 2156 Locate
rps7 gene − 95235 95702 468 Locate
rps12 gene − 95756 96549 794 Locate
trnV-GAC gene + 98187 98258 72 Locate
rrn16 gene + 98487 99977 1491 Locate
trnI-GAU gene + 100276 101294 1019 Locate
trnA-UGC gene + 101359 102233 875 Locate
rrn23 gene + 102393 105203 2811 Locate
rrn4.5 gene + 105302 105404 103 Locate
rrn5 gene + 105665 105785 121 Locate
trnR-ACG gene + 106034 106107 74 Locate
trnN-GUU gene − 106631 106703 73 Locate
ndhF gene − 107760 110003 2244 Locate
rpl32 gene + 110473 110643 171 Locate
trnL-UAG gene + 111388 111467 80 Locate
ccsA gene + 111556 112533 978 Locate
ndhD gene − 112771 114273 1503 Locate
psaC gene − 114397 114642 246 Locate
ndhE gene − 114891 115193 303 Locate
ndhG gene − 115440 115970 531 Locate
ndhI gene − 116079 116615 537 Locate
ndhA gene − 116666 118771 2106 Locate
ndhH gene − 118773 120008 1236 Locate
rps15 gene − 120054 120326 273 Locate
ycf1 gene − 120720 126395 5676 Locate
trnN-GUU gene + 126614 126686 73 Locate
trnR-ACG gene − 127210 127283 74 Locate
rrn5 gene − 127532 127652 121 Locate
rrn4.5 gene − 127913 128015 103 Locate
rrn23 gene − 128114 130924 2811 Locate
trnA-UGC gene − 131084 131958 875 Locate
trnI-GAU gene − 132023 133041 1019 Locate
rrn16 gene − 133340 134830 1491 Locate
trnV-GAC gene − 135059 135130 72 Locate
rps12 gene + 136768 137561 794 Locate
rps7 gene + 137615 138082 468 Locate
ndhB gene + 138402 140557 2156 Locate
trnL-CAA gene + 141122 141202 81 Locate
ycf15 gene − 141463 141660 198 Locate
ycf2 gene − 141802 148629 6828 Locate
trnM-CAU gene + 148718 148791 74 Locate
rpl23 gene + 149001 149234 234 Locate
rpl2 gene + 149253 150744 1492 Locate
Status Available
Accession PQ963003.1
Length 150,896 bp
GC content 37.7%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources