Elsholtzia angustifolia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_067948.1 · 11–84 bp · −
psbA · NC_067948.1 · 413–1,471 bp · −
trnK-UUU · NC_067948.1 · 1,699–4,285 bp · −
matK · NC_067948.1 · 2,008–3,549 bp · −
rps16 · NC_067948.1 · 4,801–5,947 bp · −
trnQ-UUG · NC_067948.1 · 6,764–6,835 bp · −
trnS-GCU · NC_067948.1 · 8,039–8,126 bp · −
atpA · NC_067948.1 · 9,925–11,448 bp · −
atpF · NC_067948.1 · 11,548–12,798 bp · −
atpH · NC_067948.1 · 13,066–13,311 bp · −
atpI · NC_067948.1 · 13,935–14,678 bp · −
rps2 · NC_067948.1 · 14,911–15,621 bp · −
rpoC2 · NC_067948.1 · 15,874–20,046 bp · −
rpoC1 · NC_067948.1 · 20,224–23,063 bp · −
rpoB · NC_067948.1 · 23,090–26,302 bp · −
psbM · NC_067948.1 · 28,770–28,874 bp · −
trnD-GUC · NC_067948.1 · 29,401–29,474 bp · −
trnY-GUA · NC_067948.1 · 29,585–29,668 bp · −
trnE-UUC · NC_067948.1 · 29,736–29,808 bp · −
trnS-UGA · NC_067948.1 · 34,080–34,162 bp · −
trnfM-CAU · NC_067948.1 · 35,214–35,287 bp · −
rps14 · NC_067948.1 · 35,434–35,736 bp · −
psaB · NC_067948.1 · 35,859–38,063 bp · −
psaA · NC_067948.1 · 38,089–40,341 bp · −
ycf3 · NC_067948.1 · 41,005–42,982 bp · −
rps4 · NC_067948.1 · 44,199–44,804 bp · −
trnT-UGU · NC_067948.1 · 45,204–45,276 bp · −
ndhJ · NC_067948.1 · 47,581–48,057 bp · −
ndhK · NC_067948.1 · 48,169–48,846 bp · −
ndhC · NC_067948.1 · 48,898–49,260 bp · −
trnV-UAC · NC_067948.1 · 50,196–50,846 bp · −
atpE · NC_067948.1 · 51,318–51,719 bp · −
atpB · NC_067948.1 · 51,716–53,212 bp · −
psbJ · NC_067948.1 · 63,020–63,142 bp · −
psbL · NC_067948.1 · 63,277–63,393 bp · −
psbF · NC_067948.1 · 63,417–63,536 bp · −
psbE · NC_067948.1 · 63,551–63,802 bp · −
trnW-CCA · NC_067948.1 · 65,217–65,290 bp · −
trnP-UGG · NC_067948.1 · 65,454–65,527 bp · −
rpl20 · NC_067948.1 · 67,316–67,702 bp · −
rps12 · NC_067948.1 · 68,511–68,624 bp · −
rps12 · NC_067948.1 · 95,972–96,762 bp · −
clpP · NC_067948.1 · 68,740–70,685 bp · −
psbN · NC_067948.1 · 73,021–73,152 bp · −
rpoA · NC_067948.1 · 76,624–77,631 bp · −
rps11 · NC_067948.1 · 77,703–78,110 bp · −
rpl36 · NC_067948.1 · 78,228–78,341 bp · −
infA · NC_067948.1 · 78,445–78,678 bp · −
rps8 · NC_067948.1 · 78,802–79,206 bp · −
rpl14 · NC_067948.1 · 79,374–79,742 bp · −
rpl16 · NC_067948.1 · 79,871–81,157 bp · −
rps3 · NC_067948.1 · 81,305–81,967 bp · −
rpl22 · NC_067948.1 · 81,952–82,419 bp · −
rps19 · NC_067948.1 · 82,485–82,763 bp · −
rpl2 · NC_067948.1 · 82,827–84,315 bp · −
rpl23 · NC_067948.1 · 84,334–84,615 bp · −
trnI-CAU · NC_067948.1 · 84,781–84,854 bp · −
trnL-CAA · NC_067948.1 · 92,336–92,416 bp · −
ndhB · NC_067948.1 · 92,979–95,132 bp · −
rps7 · NC_067948.1 · 95,451–95,918 bp · −
trnN-GUU · NC_067948.1 · 106,832–106,903 bp · −
ndhF · NC_067948.1 · 108,256–110,487 bp · −
ndhD · NC_067948.1 · 113,154–114,656 bp · −
psaC · NC_067948.1 · 114,779–115,024 bp · −
ndhE · NC_067948.1 · 115,277–115,582 bp · −
ndhG · NC_067948.1 · 115,803–116,333 bp · −
ndhI · NC_067948.1 · 116,686–117,192 bp · −
ndhA · NC_067948.1 · 117,273–119,384 bp · −
ndhH · NC_067948.1 · 119,386–120,567 bp · −
rps15 · NC_067948.1 · 120,645–120,938 bp · −
ycf1 · NC_067948.1 · 121,334–126,826 bp · −
trnR-ACG · NC_067948.1 · 127,780–127,853 bp · −
rrn5 · NC_067948.1 · 128,082–128,212 bp · −
rrn4.5 · NC_067948.1 · 128,468–128,570 bp · −
rrn23 · NC_067948.1 · 128,670–131,486 bp · −
trnA-UGC · NC_067948.1 · 131,647–132,530 bp · −
trnI-GAU · NC_067948.1 · 132,593–133,613 bp · −
rrn16 · NC_067948.1 · 133,912–135,402 bp · −
trnV-GAC · NC_067948.1 · 135,629–135,700 bp · −
ycf15 · NC_067948.1 · 141,979–142,227 bp · −
ycf2 · NC_067948.1 · 142,318–149,115 bp · −
psbK · NC_067948.1 · 7,202–7,387 bp · +
psbI · NC_067948.1 · 7,775–7,885 bp · +
trnG-UCC · NC_067948.1 · 8,798–9,548 bp · +
trnR-UCU · NC_067948.1 · 9,735–9,806 bp · +
trnC-GCA · NC_067948.1 · 27,447–27,517 bp · +
petN · NC_067948.1 · 27,674–27,769 bp · +
trnT-GGU · NC_067948.1 · 30,213–30,284 bp · +
psbD · NC_067948.1 · 31,402–32,463 bp · +
psbC · NC_067948.1 · 32,411–33,832 bp · +
psbZ · NC_067948.1 · 34,510–34,698 bp · +
trnG-GCC · NC_067948.1 · 34,969–35,039 bp · +
trnS-GGA · NC_067948.1 · 43,809–43,895 bp · +
trnL-UAA · NC_067948.1 · 45,949–46,527 bp · +
trnF-GAA · NC_067948.1 · 46,825–46,897 bp · +
trnM-CAU · NC_067948.1 · 51,027–51,099 bp · +
rbcL · NC_067948.1 · 53,979–55,439 bp · +
accD · NC_067948.1 · 56,151–57,632 bp · +
psaI · NC_067948.1 · 58,339–58,449 bp · +
ycf4 · NC_067948.1 · 58,903–59,457 bp · +
cemA · NC_067948.1 · 60,141–60,830 bp · +
petA · NC_067948.1 · 61,052–62,014 bp · +
petL · NC_067948.1 · 64,705–64,800 bp · +
petG · NC_067948.1 · 64,976–65,089 bp · +
psaJ · NC_067948.1 · 65,825–65,959 bp · +
rpl33 · NC_067948.1 · 66,423–66,623 bp · +
rps18 · NC_067948.1 · 66,794–67,099 bp · +
rps12 · NC_067948.1 · 137,296–138,086 bp · +
psbB · NC_067948.1 · 71,143–72,669 bp · +
psbT · NC_067948.1 · 72,854–72,955 bp · +
psbH · NC_067948.1 · 73,256–73,477 bp · +
petB · NC_067948.1 · 73,604–75,052 bp · +
petD · NC_067948.1 · 75,241–76,435 bp · +
ycf2 · NC_067948.1 · 84,943–91,740 bp · +
ycf15 · NC_067948.1 · 91,831–92,079 bp · +
trnV-GAC · NC_067948.1 · 98,358–98,429 bp · +
rrn16 · NC_067948.1 · 98,656–100,146 bp · +
trnI-GAU · NC_067948.1 · 100,445–101,465 bp · +
trnA-UGC · NC_067948.1 · 101,528–102,411 bp · +
rrn23 · NC_067948.1 · 102,572–105,388 bp · +
rrn4.5 · NC_067948.1 · 105,488–105,590 bp · +
rrn5 · NC_067948.1 · 105,846–105,976 bp · +
trnR-ACG · NC_067948.1 · 106,205–106,278 bp · +
ycf1 · NC_067948.1 · 107,232–108,362 bp · +
rpl32 · NC_067948.1 · 110,889–111,062 bp · +
trnL-UAG · NC_067948.1 · 111,753–111,832 bp · +
ccsA · NC_067948.1 · 111,929–112,900 bp · +
trnN-GUU · NC_067948.1 · 127,155–127,226 bp · +
rps7 · NC_067948.1 · 138,140–138,607 bp · +
ndhB · NC_067948.1 · 138,926–141,079 bp · +
trnL-CAA · NC_067948.1 · 141,642–141,722 bp · +
trnI-CAU · NC_067948.1 · 149,204–149,277 bp · +
rpl23 · NC_067948.1 · 149,443–149,724 bp · +
rpl2 · NC_067948.1 · 149,743–151,231 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia angustifolia
ANNOTATED PLASTOME
NC_067948.1
151,337 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37834 75668 113503 151337 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 413 1471 1059 Locate
trnK-UUU gene − 1699 4285 2587 Locate
matK gene − 2008 3549 1542 Locate
rps16 gene − 4801 5947 1147 Locate
trnQ-UUG gene − 6764 6835 72 Locate
psbK gene + 7202 7387 186 Locate
psbI gene + 7775 7885 111 Locate
trnS-GCU gene − 8039 8126 88 Locate
trnG-UCC gene + 8798 9548 751 Locate
trnR-UCU gene + 9735 9806 72 Locate
atpA gene − 9925 11448 1524 Locate
atpF gene − 11548 12798 1251 Locate
atpH gene − 13066 13311 246 Locate
atpI gene − 13935 14678 744 Locate
rps2 gene − 14911 15621 711 Locate
rpoC2 gene − 15874 20046 4173 Locate
rpoC1 gene − 20224 23063 2840 Locate
rpoB gene − 23090 26302 3213 Locate
trnC-GCA gene + 27447 27517 71 Locate
petN gene + 27674 27769 96 Locate
psbM gene − 28770 28874 105 Locate
trnD-GUC gene − 29401 29474 74 Locate
trnY-GUA gene − 29585 29668 84 Locate
trnE-UUC gene − 29736 29808 73 Locate
trnT-GGU gene + 30213 30284 72 Locate
psbD gene + 31402 32463 1062 Locate
psbC gene + 32411 33832 1422 Locate
trnS-UGA gene − 34080 34162 83 Locate
psbZ gene + 34510 34698 189 Locate
trnG-GCC gene + 34969 35039 71 Locate
trnfM-CAU gene − 35214 35287 74 Locate
rps14 gene − 35434 35736 303 Locate
psaB gene − 35859 38063 2205 Locate
psaA gene − 38089 40341 2253 Locate
ycf3 gene − 41005 42982 1978 Locate
trnS-GGA gene + 43809 43895 87 Locate
rps4 gene − 44199 44804 606 Locate
trnT-UGU gene − 45204 45276 73 Locate
trnL-UAA gene + 45949 46527 579 Locate
trnF-GAA gene + 46825 46897 73 Locate
ndhJ gene − 47581 48057 477 Locate
ndhK gene − 48169 48846 678 Locate
ndhC gene − 48898 49260 363 Locate
trnV-UAC gene − 50196 50846 651 Locate
trnM-CAU gene + 51027 51099 73 Locate
atpE gene − 51318 51719 402 Locate
atpB gene − 51716 53212 1497 Locate
rbcL gene + 53979 55439 1461 Locate
accD gene + 56151 57632 1482 Locate
psaI gene + 58339 58449 111 Locate
ycf4 gene + 58903 59457 555 Locate
cemA gene + 60141 60830 690 Locate
petA gene + 61052 62014 963 Locate
psbJ gene − 63020 63142 123 Locate
psbL gene − 63277 63393 117 Locate
psbF gene − 63417 63536 120 Locate
psbE gene − 63551 63802 252 Locate
petL gene + 64705 64800 96 Locate
petG gene + 64976 65089 114 Locate
trnW-CCA gene − 65217 65290 74 Locate
trnP-UGG gene − 65454 65527 74 Locate
psaJ gene + 65825 65959 135 Locate
rpl33 gene + 66423 66623 201 Locate
rps18 gene + 66794 67099 306 Locate
rpl20 gene − 67316 67702 387 Locate
rps12 gene − 68511 68624 114 Locate
clpP gene − 68740 70685 1946 Locate
psbB gene + 71143 72669 1527 Locate
psbT gene + 72854 72955 102 Locate
psbN gene − 73021 73152 132 Locate
psbH gene + 73256 73477 222 Locate
petB gene + 73604 75052 1449 Locate
petD gene + 75241 76435 1195 Locate
rpoA gene − 76624 77631 1008 Locate
rps11 gene − 77703 78110 408 Locate
rpl36 gene − 78228 78341 114 Locate
infA gene − 78445 78678 234 Locate
rps8 gene − 78802 79206 405 Locate
rpl14 gene − 79374 79742 369 Locate
rpl16 gene − 79871 81157 1287 Locate
rps3 gene − 81305 81967 663 Locate
rpl22 gene − 81952 82419 468 Locate
rps19 gene − 82485 82763 279 Locate
rpl2 gene − 82827 84315 1489 Locate
rpl23 gene − 84334 84615 282 Locate
trnI-CAU gene − 84781 84854 74 Locate
ycf2 gene + 84943 91740 6798 Locate
ycf15 gene + 91831 92079 249 Locate
trnL-CAA gene − 92336 92416 81 Locate
ndhB gene − 92979 95132 2154 Locate
rps7 gene − 95451 95918 468 Locate
rps12 gene − 95972 96762 791 Locate
trnV-GAC gene + 98358 98429 72 Locate
rrn16 gene + 98656 100146 1491 Locate
trnI-GAU gene + 100445 101465 1021 Locate
trnA-UGC gene + 101528 102411 884 Locate
rrn23 gene + 102572 105388 2817 Locate
rrn4.5 gene + 105488 105590 103 Locate
rrn5 gene + 105846 105976 131 Locate
trnR-ACG gene + 106205 106278 74 Locate
trnN-GUU gene − 106832 106903 72 Locate
ycf1 gene + 107232 108362 1131 Locate
ndhF gene − 108256 110487 2232 Locate
rpl32 gene + 110889 111062 174 Locate
trnL-UAG gene + 111753 111832 80 Locate
ccsA gene + 111929 112900 972 Locate
ndhD gene − 113154 114656 1503 Locate
psaC gene − 114779 115024 246 Locate
ndhE gene − 115277 115582 306 Locate
ndhG gene − 115803 116333 531 Locate
ndhI gene − 116686 117192 507 Locate
ndhA gene − 117273 119384 2112 Locate
ndhH gene − 119386 120567 1182 Locate
rps15 gene − 120645 120938 294 Locate
ycf1 gene − 121334 126826 5493 Locate
trnN-GUU gene + 127155 127226 72 Locate
trnR-ACG gene − 127780 127853 74 Locate
rrn5 gene − 128082 128212 131 Locate
rrn4.5 gene − 128468 128570 103 Locate
rrn23 gene − 128670 131486 2817 Locate
trnA-UGC gene − 131647 132530 884 Locate
trnI-GAU gene − 132593 133613 1021 Locate
rrn16 gene − 133912 135402 1491 Locate
trnV-GAC gene − 135629 135700 72 Locate
rps12 gene + 137296 138086 791 Locate
rps7 gene + 138140 138607 468 Locate
ndhB gene + 138926 141079 2154 Locate
trnL-CAA gene + 141642 141722 81 Locate
ycf15 gene − 141979 142227 249 Locate
ycf2 gene − 142318 149115 6798 Locate
trnI-CAU gene + 149204 149277 74 Locate
rpl23 gene + 149443 149724 282 Locate
rpl2 gene + 149743 151231 1489 Locate
Status Available
Accession NC_067948.1
Length 151,337 bp
GC content 37.8%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources