Elsholtzia blanda chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR701859.1 · 3–78 bp · −
psbA · OR701859.1 · 408–1,466 bp · −
trnK-UUU · OR701859.1 · 1,694–4,260 bp · −
matK · OR701859.1 · 1,967–3,526 bp · −
rps16 · OR701859.1 · 4,787–5,915 bp · −
trnQ-UUG · OR701859.1 · 6,823–6,894 bp · −
trnS-GCU · OR701859.1 · 8,112–8,199 bp · −
atpA · OR701859.1 · 10,009–11,532 bp · −
atpF · OR701859.1 · 11,633–12,885 bp · −
atpH · OR701859.1 · 13,158–13,403 bp · −
atpI · OR701859.1 · 14,425–15,168 bp · −
rps2 · OR701859.1 · 15,402–16,112 bp · −
rpoC2 · OR701859.1 · 16,343–20,524 bp · −
rpoC1 · OR701859.1 · 20,689–23,493 bp · −
rpoB · OR701859.1 · 23,520–26,732 bp · −
psbM · OR701859.1 · 29,239–29,343 bp · −
trnD-GUC · OR701859.1 · 29,710–29,783 bp · −
trnY-GUA · OR701859.1 · 29,894–29,977 bp · −
trnE-UUC · OR701859.1 · 30,056–30,128 bp · −
trnS-UGA · OR701859.1 · 34,552–34,634 bp · −
trnfM-CAU · OR701859.1 · 35,674–35,747 bp · −
rps14 · OR701859.1 · 35,892–36,194 bp · −
psaB · OR701859.1 · 36,317–38,521 bp · −
psaA · OR701859.1 · 38,547–40,799 bp · −
ycf3 · OR701859.1 · 41,490–43,464 bp · −
rps4 · OR701859.1 · 44,700–45,305 bp · −
trnT-UGU · OR701859.1 · 45,709–45,781 bp · −
ndhJ · OR701859.1 · 48,119–48,595 bp · −
ndhK · OR701859.1 · 48,707–49,384 bp · −
ndhC · OR701859.1 · 49,436–49,798 bp · −
trnV-UAC · OR701859.1 · 50,759–51,408 bp · −
atpE · OR701859.1 · 51,877–52,278 bp · −
atpB · OR701859.1 · 52,275–53,771 bp · −
psbJ · OR701859.1 · 63,468–63,590 bp · −
psbL · OR701859.1 · 63,725–63,841 bp · −
psbF · OR701859.1 · 63,865–63,984 bp · −
psbE · OR701859.1 · 63,999–64,250 bp · −
trnW-CCA · OR701859.1 · 65,662–65,735 bp · −
trnP-UGG · OR701859.1 · 65,904–65,977 bp · −
rpl20 · OR701859.1 · 67,742–68,128 bp · −
rps12 · OR701859.1 · 68,943–69,056 bp · −
rps12 · OR701859.1 · 96,407–97,200 bp · −
clpP1 · OR701859.1 · 69,174–71,116 bp · −
psbN · OR701859.1 · 73,451–73,582 bp · −
rpoA · OR701859.1 · 76,979–77,986 bp · −
rps11 · OR701859.1 · 78,058–78,474 bp · −
rpl36 · OR701859.1 · 78,584–78,697 bp · −
infA · OR701859.1 · 78,801–79,034 bp · −
rps8 · OR701859.1 · 79,162–79,566 bp · −
rpl14 · OR701859.1 · 79,740–80,108 bp · −
rpl16 · OR701859.1 · 80,241–81,518 bp · −
rps3 · OR701859.1 · 81,661–82,323 bp · −
rpl22 · OR701859.1 · 82,308–82,775 bp · −
rps19 · OR701859.1 · 82,859–83,137 bp · −
rpl2 · OR701859.1 · 83,198–84,686 bp · −
rpl23 · OR701859.1 · 84,705–84,986 bp · −
trnM-CAU · OR701859.1 · 85,152–85,225 bp · −
trnL-CAA · OR701859.1 · 92,757–92,837 bp · −
ndhB · OR701859.1 · 93,414–95,621 bp · −
rps7 · OR701859.1 · 95,886–96,353 bp · −
trnN-GUU · OR701859.1 · 107,294–107,365 bp · −
ndhF · OR701859.1 · 108,718–110,949 bp · −
ndhD · OR701859.1 · 113,583–115,112 bp · −
psaC · OR701859.1 · 115,209–115,454 bp · −
ndhE · OR701859.1 · 115,705–116,010 bp · −
ndhG · OR701859.1 · 116,237–116,767 bp · −
ndhI · OR701859.1 · 117,112–117,618 bp · −
ndhA · OR701859.1 · 117,700–119,809 bp · −
ndhH · OR701859.1 · 119,811–121,046 bp · −
rps15 · OR701859.1 · 121,092–121,364 bp · −
ycf1 · OR701859.1 · 121,803–127,457 bp · −
trnR-ACG · OR701859.1 · 128,307–128,380 bp · −
rrn5 · OR701859.1 · 128,624–128,744 bp · −
rrn4.5 · OR701859.1 · 129,005–129,107 bp · −
rrn23 · OR701859.1 · 129,206–132,016 bp · −
trnA-UGC · OR701859.1 · 132,176–133,059 bp · −
trnI-GAU · OR701859.1 · 133,124–134,142 bp · −
rrn16 · OR701859.1 · 134,445–135,935 bp · −
trnV-GAC · OR701859.1 · 136,162–136,233 bp · −
ycf15 · OR701859.1 · 142,410–142,727 bp · −
ycf2 · OR701859.1 · 142,869–149,726 bp · −
rps19 · OR701859.1 · 151,903–151,970 bp · +
rps19 · OR701859.1 · 1–23 bp · +
psbK · OR701859.1 · 7,282–7,467 bp · +
psbI · OR701859.1 · 7,854–7,964 bp · +
trnG-UCC · OR701859.1 · 8,867–9,619 bp · +
trnR-UCU · OR701859.1 · 9,833–9,904 bp · +
trnC-GCA · OR701859.1 · 27,901–27,971 bp · +
petN · OR701859.1 · 28,134–28,223 bp · +
trnT-GGU · OR701859.1 · 30,663–30,734 bp · +
psbD · OR701859.1 · 31,876–32,937 bp · +
psbC · OR701859.1 · 32,885–34,306 bp · +
psbZ · OR701859.1 · 34,977–35,165 bp · +
trnG-GCC · OR701859.1 · 35,434–35,504 bp · +
trnS-GGA · OR701859.1 · 44,310–44,396 bp · +
trnL-UAA · OR701859.1 · 46,499–47,067 bp · +
trnF-GAA · OR701859.1 · 47,362–47,434 bp · +
trnM-CAU · OR701859.1 · 51,589–51,661 bp · +
rbcL · OR701859.1 · 54,569–56,029 bp · +
accD · OR701859.1 · 56,696–58,177 bp · +
psaI · OR701859.1 · 58,882–58,992 bp · +
ycf4 · OR701859.1 · 59,451–60,005 bp · +
cemA · OR701859.1 · 60,665–61,354 bp · +
petA · OR701859.1 · 61,596–62,558 bp · +
petL · OR701859.1 · 65,151–65,246 bp · +
petG · OR701859.1 · 65,422–65,535 bp · +
psaJ · OR701859.1 · 66,260–66,394 bp · +
rpl33 · OR701859.1 · 66,834–67,034 bp · +
rps18 · OR701859.1 · 67,203–67,508 bp · +
rps12 · OR701859.1 · 137,840–138,633 bp · +
psbB · OR701859.1 · 71,574–73,100 bp · +
psbT · OR701859.1 · 73,284–73,385 bp · +
psbH · OR701859.1 · 73,688–73,909 bp · +
petB · OR701859.1 · 74,037–75,413 bp · +
petD · OR701859.1 · 75,602–76,796 bp · +
ycf2 · OR701859.1 · 85,314–92,171 bp · +
ycf15 · OR701859.1 · 92,313–92,630 bp · +
trnV-GAC · OR701859.1 · 98,807–98,878 bp · +
rrn16 · OR701859.1 · 99,105–100,595 bp · +
trnI-GAU · OR701859.1 · 100,898–101,916 bp · +
trnA-UGC · OR701859.1 · 101,981–102,864 bp · +
rrn23 · OR701859.1 · 103,024–105,834 bp · +
rrn4.5 · OR701859.1 · 105,933–106,035 bp · +
rrn5 · OR701859.1 · 106,296–106,416 bp · +
trnR-ACG · OR701859.1 · 106,660–106,733 bp · +
ycf1 · OR701859.1 · 107,583–108,764 bp · +
rpl32 · OR701859.1 · 111,340–111,510 bp · +
trnL-UAG · OR701859.1 · 112,199–112,278 bp · +
ccsA · OR701859.1 · 112,366–113,337 bp · +
trnN-GUU · OR701859.1 · 127,675–127,746 bp · +
rps7 · OR701859.1 · 138,687–139,154 bp · +
ndhB · OR701859.1 · 139,419–141,626 bp · +
trnL-CAA · OR701859.1 · 142,203–142,283 bp · +
trnM-CAU · OR701859.1 · 149,815–149,888 bp · +
rpl23 · OR701859.1 · 150,054–150,335 bp · +
rpl2 · OR701859.1 · 150,354–151,842 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia blanda
ANNOTATED PLASTOME
OR701859.1
151,970 bp · 134 genes
Gene function
Ribosomal protein
Transfer RNA
Photosystem II
Other
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37992 75985 113978 151970 bp
Forward strand 5′ → 3′
rps19 psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
136 local segments
Gene Type Group Strand Start End Length
rps19 gene + 1 23 23 Locate
trnH-GUG gene − 3 78 76 Locate
psbA gene − 408 1466 1059 Locate
trnK-UUU gene − 1694 4260 2567 Locate
matK gene − 1967 3526 1560 Locate
rps16 gene − 4787 5915 1129 Locate
trnQ-UUG gene − 6823 6894 72 Locate
psbK gene + 7282 7467 186 Locate
psbI gene + 7854 7964 111 Locate
trnS-GCU gene − 8112 8199 88 Locate
trnG-UCC gene + 8867 9619 753 Locate
trnR-UCU gene + 9833 9904 72 Locate
atpA gene − 10009 11532 1524 Locate
atpF gene − 11633 12885 1253 Locate
atpH gene − 13158 13403 246 Locate
atpI gene − 14425 15168 744 Locate
rps2 gene − 15402 16112 711 Locate
rpoC2 gene − 16343 20524 4182 Locate
rpoC1 gene − 20689 23493 2805 Locate
rpoB gene − 23520 26732 3213 Locate
trnC-GCA gene + 27901 27971 71 Locate
petN gene + 28134 28223 90 Locate
psbM gene − 29239 29343 105 Locate
trnD-GUC gene − 29710 29783 74 Locate
trnY-GUA gene − 29894 29977 84 Locate
trnE-UUC gene − 30056 30128 73 Locate
trnT-GGU gene + 30663 30734 72 Locate
psbD gene + 31876 32937 1062 Locate
psbC gene + 32885 34306 1422 Locate
trnS-UGA gene − 34552 34634 83 Locate
psbZ gene + 34977 35165 189 Locate
trnG-GCC gene + 35434 35504 71 Locate
trnfM-CAU gene − 35674 35747 74 Locate
rps14 gene − 35892 36194 303 Locate
psaB gene − 36317 38521 2205 Locate
psaA gene − 38547 40799 2253 Locate
ycf3 gene − 41490 43464 1975 Locate
trnS-GGA gene + 44310 44396 87 Locate
rps4 gene − 44700 45305 606 Locate
trnT-UGU gene − 45709 45781 73 Locate
trnL-UAA gene + 46499 47067 569 Locate
trnF-GAA gene + 47362 47434 73 Locate
ndhJ gene − 48119 48595 477 Locate
ndhK gene − 48707 49384 678 Locate
ndhC gene − 49436 49798 363 Locate
trnV-UAC gene − 50759 51408 650 Locate
trnM-CAU gene + 51589 51661 73 Locate
atpE gene − 51877 52278 402 Locate
atpB gene − 52275 53771 1497 Locate
rbcL gene + 54569 56029 1461 Locate
accD gene + 56696 58177 1482 Locate
psaI gene + 58882 58992 111 Locate
ycf4 gene + 59451 60005 555 Locate
cemA gene + 60665 61354 690 Locate
petA gene + 61596 62558 963 Locate
psbJ gene − 63468 63590 123 Locate
psbL gene − 63725 63841 117 Locate
psbF gene − 63865 63984 120 Locate
psbE gene − 63999 64250 252 Locate
petL gene + 65151 65246 96 Locate
petG gene + 65422 65535 114 Locate
trnW-CCA gene − 65662 65735 74 Locate
trnP-UGG gene − 65904 65977 74 Locate
psaJ gene + 66260 66394 135 Locate
rpl33 gene + 66834 67034 201 Locate
rps18 gene + 67203 67508 306 Locate
rpl20 gene − 67742 68128 387 Locate
rps12 gene − 68943 69056 114 Locate
clpP1 gene − 69174 71116 1943 Locate
psbB gene + 71574 73100 1527 Locate
psbT gene + 73284 73385 102 Locate
psbN gene − 73451 73582 132 Locate
psbH gene + 73688 73909 222 Locate
petB gene + 74037 75413 1377 Locate
petD gene + 75602 76796 1195 Locate
rpoA gene − 76979 77986 1008 Locate
rps11 gene − 78058 78474 417 Locate
rpl36 gene − 78584 78697 114 Locate
infA gene − 78801 79034 234 Locate
rps8 gene − 79162 79566 405 Locate
rpl14 gene − 79740 80108 369 Locate
rpl16 gene − 80241 81518 1278 Locate
rps3 gene − 81661 82323 663 Locate
rpl22 gene − 82308 82775 468 Locate
rps19 gene − 82859 83137 279 Locate
rpl2 gene − 83198 84686 1489 Locate
rpl23 gene − 84705 84986 282 Locate
trnM-CAU gene − 85152 85225 74 Locate
ycf2 gene + 85314 92171 6858 Locate
ycf15 gene + 92313 92630 318 Locate
trnL-CAA gene − 92757 92837 81 Locate
ndhB gene − 93414 95621 2208 Locate
rps7 gene − 95886 96353 468 Locate
rps12 gene − 96407 97200 794 Locate
trnV-GAC gene + 98807 98878 72 Locate
rrn16 gene + 99105 100595 1491 Locate
trnI-GAU gene + 100898 101916 1019 Locate
trnA-UGC gene + 101981 102864 884 Locate
rrn23 gene + 103024 105834 2811 Locate
rrn4.5 gene + 105933 106035 103 Locate
rrn5 gene + 106296 106416 121 Locate
trnR-ACG gene + 106660 106733 74 Locate
trnN-GUU gene − 107294 107365 72 Locate
ycf1 gene + 107583 108764 1182 Locate
ndhF gene − 108718 110949 2232 Locate
rpl32 gene + 111340 111510 171 Locate
trnL-UAG gene + 112199 112278 80 Locate
ccsA gene + 112366 113337 972 Locate
ndhD gene − 113583 115112 1530 Locate
psaC gene − 115209 115454 246 Locate
ndhE gene − 115705 116010 306 Locate
ndhG gene − 116237 116767 531 Locate
ndhI gene − 117112 117618 507 Locate
ndhA gene − 117700 119809 2110 Locate
ndhH gene − 119811 121046 1236 Locate
rps15 gene − 121092 121364 273 Locate
ycf1 gene − 121803 127457 5655 Locate
trnN-GUU gene + 127675 127746 72 Locate
trnR-ACG gene − 128307 128380 74 Locate
rrn5 gene − 128624 128744 121 Locate
rrn4.5 gene − 129005 129107 103 Locate
rrn23 gene − 129206 132016 2811 Locate
trnA-UGC gene − 132176 133059 884 Locate
trnI-GAU gene − 133124 134142 1019 Locate
rrn16 gene − 134445 135935 1491 Locate
trnV-GAC gene − 136162 136233 72 Locate
rps12 gene + 137840 138633 794 Locate
rps7 gene + 138687 139154 468 Locate
ndhB gene + 139419 141626 2208 Locate
trnL-CAA gene + 142203 142283 81 Locate
ycf15 gene − 142410 142727 318 Locate
ycf2 gene − 142869 149726 6858 Locate
trnM-CAU gene + 149815 149888 74 Locate
rpl23 gene + 150054 150335 282 Locate
rpl2 gene + 150354 151842 1489 Locate
rps19 gene + 151903 151970 68 Locate
Status Available
Accession OR701859.1
Length 151,970 bp
GC content 37.9%
Annotated genes 134
Gene sequence records 8
Ribosomal Protein 28 Translation Rna 37 Photosystem Ii 15 Other 15 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources