Elsholtzia bodinieri chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP357159.1 · 14–87 bp · −
psbA · PP357159.1 · 417–1,475 bp · −
trnK-UUU · PP357159.1 · 1,705–4,294 bp · −
matK · PP357159.1 · 2,003–3,544 bp · −
rps16 · PP357159.1 · 4,820–5,954 bp · −
trnQ-UUG · PP357159.1 · 6,800–6,871 bp · −
trnS-GCU · PP357159.1 · 8,087–8,174 bp · −
atpA · PP357159.1 · 9,971–11,494 bp · −
atpF · PP357159.1 · 11,594–12,861 bp · −
atpH · PP357159.1 · 13,134–13,379 bp · −
atpI · PP357159.1 · 14,030–14,773 bp · −
rps2 · PP357159.1 · 15,005–15,715 bp · −
rpoC2 · PP357159.1 · 15,958–20,133 bp · −
rpoC1 · PP357159.1 · 20,298–23,109 bp · −
rpoB · PP357159.1 · 23,136–26,348 bp · −
psbM · PP357159.1 · 28,745–28,849 bp · −
trnD-GUC · PP357159.1 · 29,375–29,448 bp · −
trnY-GUA · PP357159.1 · 29,560–29,643 bp · −
trnE-UUC · PP357159.1 · 29,722–29,794 bp · −
trnS-UGA · PP357159.1 · 34,178–34,259 bp · −
trnfM-CAU · PP357159.1 · 35,314–35,387 bp · −
rps14 · PP357159.1 · 35,532–35,834 bp · −
psaB · PP357159.1 · 35,957–38,161 bp · −
psaA · PP357159.1 · 38,187–40,439 bp · −
ycf3 · PP357159.1 · 41,120–43,117 bp · −
rps4 · PP357159.1 · 44,366–44,971 bp · −
trnT-UGU · PP357159.1 · 45,387–45,459 bp · −
ndhJ · PP357159.1 · 47,763–48,239 bp · −
ndhK · PP357159.1 · 48,351–49,028 bp · −
ndhC · PP357159.1 · 49,080–49,442 bp · −
trnV-UAC · PP357159.1 · 50,382–51,031 bp · −
atpE · PP357159.1 · 51,511–51,912 bp · −
atpB · PP357159.1 · 51,909–53,405 bp · −
psbJ · PP357159.1 · 63,205–63,327 bp · −
psbL · PP357159.1 · 63,462–63,578 bp · −
psbF · PP357159.1 · 63,602–63,721 bp · −
psbE · PP357159.1 · 63,736–63,987 bp · −
trnW-CCA · PP357159.1 · 65,416–65,489 bp · −
trnP-UGG · PP357159.1 · 65,656–65,729 bp · −
rpl20 · PP357159.1 · 67,509–67,895 bp · −
rps12 · PP357159.1 · 68,704–68,829 bp · −
rps12 · PP357159.1 · 96,182–96,972 bp · −
clpP · PP357159.1 · 68,945–70,907 bp · −
psbN · PP357159.1 · 73,241–73,372 bp · −
rpoA · PP357159.1 · 76,783–77,784 bp · −
rps11 · PP357159.1 · 77,856–78,260 bp · −
rpl36 · PP357159.1 · 78,371–78,484 bp · −
infA · PP357159.1 · 78,588–78,821 bp · −
rps8 · PP357159.1 · 78,950–79,354 bp · −
rpl14 · PP357159.1 · 79,532–79,900 bp · −
rpl16 · PP357159.1 · 80,029–81,313 bp · −
rps3 · PP357159.1 · 81,456–82,118 bp · −
rpl22 · PP357159.1 · 82,103–82,570 bp · −
rps19 · PP357159.1 · 82,637–82,915 bp · −
rpl2 · PP357159.1 · 82,972–84,460 bp · −
rpl23 · PP357159.1 · 84,479–84,760 bp · −
trnI-CAU · PP357159.1 · 84,926–84,999 bp · −
trnL-CAA · PP357159.1 · 92,531–92,611 bp · −
ndhB · PP357159.1 · 93,189–95,342 bp · −
rps7 · PP357159.1 · 95,661–96,128 bp · −
trnN-GUU · PP357159.1 · 107,045–107,116 bp · −
ndhF · PP357159.1 · 108,469–110,700 bp · −
ndhD · PP357159.1 · 113,367–114,896 bp · −
psaC · PP357159.1 · 114,991–115,236 bp · −
ndhE · PP357159.1 · 115,487–115,792 bp · −
ndhG · PP357159.1 · 116,011–116,541 bp · −
ndhI · PP357159.1 · 116,885–117,391 bp · −
ndhA · PP357159.1 · 117,472–119,547 bp · −
ndhH · PP357159.1 · 119,549–120,787 bp · −
rps15 · PP357159.1 · 120,833–121,105 bp · −
ycf1 · PP357159.1 · 121,504–127,110 bp · −
trnR-ACG · PP357159.1 · 127,954–128,027 bp · −
rrn5 · PP357159.1 · 128,271–128,391 bp · −
rrn4.5 · PP357159.1 · 128,647–128,749 bp · −
rrn23 · PP357159.1 · 128,849–131,658 bp · −
trnA-UGC · PP357159.1 · 131,826–132,709 bp · −
trnI-GAU · PP357159.1 · 132,774–133,792 bp · −
rrn16 · PP357159.1 · 134,091–135,581 bp · −
trnV-GAC · PP357159.1 · 135,808–135,879 bp · −
ycf2 · PP357159.1 · 142,508–149,356 bp · −
psbK · PP357159.1 · 7,249–7,443 bp · +
psbI · PP357159.1 · 7,835–7,945 bp · +
trnG-UCC · PP357159.1 · 8,861–9,609 bp · +
trnR-UCU · PP357159.1 · 9,795–9,866 bp · +
trnC-GCA · PP357159.1 · 27,364–27,434 bp · +
petN · PP357159.1 · 27,591–27,686 bp · +
trnT-GGU · PP357159.1 · 30,341–30,412 bp · +
psbD · PP357159.1 · 31,499–32,560 bp · +
psbC · PP357159.1 · 32,508–33,929 bp · +
psbZ · PP357159.1 · 34,607–34,795 bp · +
trnG-GCC · PP357159.1 · 35,071–35,141 bp · +
trnS-GGA · PP357159.1 · 43,976–44,062 bp · +
trnL-UAA · PP357159.1 · 46,130–46,706 bp · +
trnF-GAA · PP357159.1 · 47,002–47,074 bp · +
trnM-CAU · PP357159.1 · 51,212–51,284 bp · +
rbcL · PP357159.1 · 54,182–55,654 bp · +
accD · PP357159.1 · 56,356–57,837 bp · +
psaI · PP357159.1 · 58,515–58,625 bp · +
ycf4 · PP357159.1 · 59,081–59,635 bp · +
cemA · PP357159.1 · 60,296–60,985 bp · +
petA · PP357159.1 · 61,213–62,175 bp · +
petL · PP357159.1 · 64,904–64,999 bp · +
petG · PP357159.1 · 65,175–65,288 bp · +
psaJ · PP357159.1 · 66,023–66,157 bp · +
rpl33 · PP357159.1 · 66,617–66,817 bp · +
rps18 · PP357159.1 · 66,982–67,287 bp · +
rps12 · PP357159.1 · 137,472–138,262 bp · +
psbB · PP357159.1 · 71,365–72,891 bp · +
psbT · PP357159.1 · 73,074–73,175 bp · +
psbH · PP357159.1 · 73,483–73,704 bp · +
petB · PP357159.1 · 73,832–75,203 bp · +
petD · PP357159.1 · 75,393–76,587 bp · +
ycf2 · PP357159.1 · 85,088–91,936 bp · +
trnV-GAC · PP357159.1 · 98,565–98,636 bp · +
rrn16 · PP357159.1 · 98,863–100,353 bp · +
trnI-GAU · PP357159.1 · 100,652–101,670 bp · +
trnA-UGC · PP357159.1 · 101,735–102,618 bp · +
rrn23 · PP357159.1 · 102,786–105,595 bp · +
rrn4.5 · PP357159.1 · 105,695–105,797 bp · +
rrn5 · PP357159.1 · 106,053–106,173 bp · +
trnR-ACG · PP357159.1 · 106,417–106,490 bp · +
rpl32 · PP357159.1 · 111,114–111,299 bp · +
trnL-UAG · PP357159.1 · 111,974–112,053 bp · +
ccsA · PP357159.1 · 112,140–113,111 bp · +
trnN-GUU · PP357159.1 · 127,328–127,399 bp · +
rps7 · PP357159.1 · 138,316–138,783 bp · +
ndhB · PP357159.1 · 139,102–141,255 bp · +
trnL-CAA · PP357159.1 · 141,833–141,913 bp · +
trnI-CAU · PP357159.1 · 149,445–149,518 bp · +
rpl23 · PP357159.1 · 149,684–149,965 bp · +
rpl2 · PP357159.1 · 149,984–151,472 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia bodinieri
ANNOTATED PLASTOME
PP357159.1
151,517 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37879 75758 113638 151517 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 14 87 74 Locate
psbA gene − 417 1475 1059 Locate
trnK-UUU gene − 1705 4294 2590 Locate
matK gene − 2003 3544 1542 Locate
rps16 gene − 4820 5954 1135 Locate
trnQ-UUG gene − 6800 6871 72 Locate
psbK gene + 7249 7443 195 Locate
psbI gene + 7835 7945 111 Locate
trnS-GCU gene − 8087 8174 88 Locate
trnG-UCC gene + 8861 9609 749 Locate
trnR-UCU gene + 9795 9866 72 Locate
atpA gene − 9971 11494 1524 Locate
atpF gene − 11594 12861 1268 Locate
atpH gene − 13134 13379 246 Locate
atpI gene − 14030 14773 744 Locate
rps2 gene − 15005 15715 711 Locate
rpoC2 gene − 15958 20133 4176 Locate
rpoC1 gene − 20298 23109 2812 Locate
rpoB gene − 23136 26348 3213 Locate
trnC-GCA gene + 27364 27434 71 Locate
petN gene + 27591 27686 96 Locate
psbM gene − 28745 28849 105 Locate
trnD-GUC gene − 29375 29448 74 Locate
trnY-GUA gene − 29560 29643 84 Locate
trnE-UUC gene − 29722 29794 73 Locate
trnT-GGU gene + 30341 30412 72 Locate
psbD gene + 31499 32560 1062 Locate
psbC gene + 32508 33929 1422 Locate
trnS-UGA gene − 34178 34259 82 Locate
psbZ gene + 34607 34795 189 Locate
trnG-GCC gene + 35071 35141 71 Locate
trnfM-CAU gene − 35314 35387 74 Locate
rps14 gene − 35532 35834 303 Locate
psaB gene − 35957 38161 2205 Locate
psaA gene − 38187 40439 2253 Locate
ycf3 gene − 41120 43117 1998 Locate
trnS-GGA gene + 43976 44062 87 Locate
rps4 gene − 44366 44971 606 Locate
trnT-UGU gene − 45387 45459 73 Locate
trnL-UAA gene + 46130 46706 577 Locate
trnF-GAA gene + 47002 47074 73 Locate
ndhJ gene − 47763 48239 477 Locate
ndhK gene − 48351 49028 678 Locate
ndhC gene − 49080 49442 363 Locate
trnV-UAC gene − 50382 51031 650 Locate
trnM-CAU gene + 51212 51284 73 Locate
atpE gene − 51511 51912 402 Locate
atpB gene − 51909 53405 1497 Locate
rbcL gene + 54182 55654 1473 Locate
accD gene + 56356 57837 1482 Locate
psaI gene + 58515 58625 111 Locate
ycf4 gene + 59081 59635 555 Locate
cemA gene + 60296 60985 690 Locate
petA gene + 61213 62175 963 Locate
psbJ gene − 63205 63327 123 Locate
psbL gene − 63462 63578 117 Locate
psbF gene − 63602 63721 120 Locate
psbE gene − 63736 63987 252 Locate
petL gene + 64904 64999 96 Locate
petG gene + 65175 65288 114 Locate
trnW-CCA gene − 65416 65489 74 Locate
trnP-UGG gene − 65656 65729 74 Locate
psaJ gene + 66023 66157 135 Locate
rpl33 gene + 66617 66817 201 Locate
rps18 gene + 66982 67287 306 Locate
rpl20 gene − 67509 67895 387 Locate
rps12 gene − 68704 68829 126 Locate
clpP gene − 68945 70907 1963 Locate
psbB gene + 71365 72891 1527 Locate
psbT gene + 73074 73175 102 Locate
psbN gene − 73241 73372 132 Locate
psbH gene + 73483 73704 222 Locate
petB gene + 73832 75203 1372 Locate
petD gene + 75393 76587 1195 Locate
rpoA gene − 76783 77784 1002 Locate
rps11 gene − 77856 78260 405 Locate
rpl36 gene − 78371 78484 114 Locate
infA gene − 78588 78821 234 Locate
rps8 gene − 78950 79354 405 Locate
rpl14 gene − 79532 79900 369 Locate
rpl16 gene − 80029 81313 1285 Locate
rps3 gene − 81456 82118 663 Locate
rpl22 gene − 82103 82570 468 Locate
rps19 gene − 82637 82915 279 Locate
rpl2 gene − 82972 84460 1489 Locate
rpl23 gene − 84479 84760 282 Locate
trnI-CAU gene − 84926 84999 74 Locate
ycf2 gene + 85088 91936 6849 Locate
trnL-CAA gene − 92531 92611 81 Locate
ndhB gene − 93189 95342 2154 Locate
rps7 gene − 95661 96128 468 Locate
rps12 gene − 96182 96972 791 Locate
trnV-GAC gene + 98565 98636 72 Locate
rrn16 gene + 98863 100353 1491 Locate
trnI-GAU gene + 100652 101670 1019 Locate
trnA-UGC gene + 101735 102618 884 Locate
rrn23 gene + 102786 105595 2810 Locate
rrn4.5 gene + 105695 105797 103 Locate
rrn5 gene + 106053 106173 121 Locate
trnR-ACG gene + 106417 106490 74 Locate
trnN-GUU gene − 107045 107116 72 Locate
ndhF gene − 108469 110700 2232 Locate
rpl32 gene + 111114 111299 186 Locate
trnL-UAG gene + 111974 112053 80 Locate
ccsA gene + 112140 113111 972 Locate
ndhD gene − 113367 114896 1530 Locate
psaC gene − 114991 115236 246 Locate
ndhE gene − 115487 115792 306 Locate
ndhG gene − 116011 116541 531 Locate
ndhI gene − 116885 117391 507 Locate
ndhA gene − 117472 119547 2076 Locate
ndhH gene − 119549 120787 1239 Locate
rps15 gene − 120833 121105 273 Locate
ycf1 gene − 121504 127110 5607 Locate
trnN-GUU gene + 127328 127399 72 Locate
trnR-ACG gene − 127954 128027 74 Locate
rrn5 gene − 128271 128391 121 Locate
rrn4.5 gene − 128647 128749 103 Locate
rrn23 gene − 128849 131658 2810 Locate
trnA-UGC gene − 131826 132709 884 Locate
trnI-GAU gene − 132774 133792 1019 Locate
rrn16 gene − 134091 135581 1491 Locate
trnV-GAC gene − 135808 135879 72 Locate
rps12 gene + 137472 138262 791 Locate
rps7 gene + 138316 138783 468 Locate
ndhB gene + 139102 141255 2154 Locate
trnL-CAA gene + 141833 141913 81 Locate
ycf2 gene − 142508 149356 6849 Locate
trnI-CAU gene + 149445 149518 74 Locate
rpl23 gene + 149684 149965 282 Locate
rpl2 gene + 149984 151472 1489 Locate
Status Available
Accession PP357159.1
Length 151,517 bp
GC content 37.9%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources