Elsholtzia byeonsanensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_064501.1 · 13–84 bp · −
psbA · NC_064501.1 · 406–1,464 bp · −
trnK-UUU · NC_064501.1 · 1,692–4,279 bp · −
matK · NC_064501.1 · 2,001–3,542 bp · −
trnQ-UUG · NC_064501.1 · 6,792–6,863 bp · −
trnS-GCU · NC_064501.1 · 8,051–8,144 bp · −
atpA · NC_064501.1 · 9,808–11,331 bp · −
atpF · NC_064501.1 · 11,431–12,683 bp · −
atpH · NC_064501.1 · 12,951–13,196 bp · −
atpI · NC_064501.1 · 13,820–14,563 bp · −
rps2 · NC_064501.1 · 14,796–15,506 bp · −
rpoC2 · NC_064501.1 · 15,736–19,908 bp · −
rpoC1 · NC_064501.1 · 20,086–22,925 bp · −
rpoB · NC_064501.1 · 22,952–26,164 bp · −
psbM · NC_064501.1 · 28,636–28,740 bp · −
trnD-GUC · NC_064501.1 · 29,266–29,339 bp · −
trnY-GUA · NC_064501.1 · 29,450–29,533 bp · −
trnE-UUC · NC_064501.1 · 29,601–29,673 bp · −
trnS-UGA · NC_064501.1 · 34,103–34,185 bp · −
trnfM-CAU · NC_064501.1 · 35,239–35,312 bp · −
rps14 · NC_064501.1 · 35,459–35,761 bp · −
psaB · NC_064501.1 · 35,884–38,088 bp · −
psaA · NC_064501.1 · 38,114–40,366 bp · −
ycf3 · NC_064501.1 · 41,046–43,023 bp · −
rps4 · NC_064501.1 · 44,255–44,860 bp · −
trnT-UGU · NC_064501.1 · 45,272–45,344 bp · −
ndhJ · NC_064501.1 · 47,662–48,138 bp · −
ndhK · NC_064501.1 · 48,250–48,927 bp · −
ndhC · NC_064501.1 · 48,979–49,341 bp · −
trnV-UAC · NC_064501.1 · 50,277–50,928 bp · −
atpE · NC_064501.1 · 51,401–51,802 bp · −
atpB · NC_064501.1 · 51,799–53,295 bp · −
psbJ · NC_064501.1 · 63,113–63,235 bp · −
psbL · NC_064501.1 · 63,370–63,486 bp · −
psbF · NC_064501.1 · 63,510–63,629 bp · −
psbE · NC_064501.1 · 63,644–63,895 bp · −
trnW-CCA · NC_064501.1 · 65,310–65,383 bp · −
trnP-UGG · NC_064501.1 · 65,551–65,624 bp · −
rpl20 · NC_064501.1 · 67,405–67,791 bp · −
rps12 · NC_064501.1 · 68,602–68,715 bp · −
clpP · NC_064501.1 · 68,831–70,771 bp · −
psbN · NC_064501.1 · 73,109–73,240 bp · −
rpoA · NC_064501.1 · 76,648–77,655 bp · −
rps11 · NC_064501.1 · 77,727–78,134 bp · −
rpl36 · NC_064501.1 · 78,248–78,361 bp · −
infA · NC_064501.1 · 78,464–78,697 bp · −
rps8 · NC_064501.1 · 78,821–79,225 bp · −
rpl14 · NC_064501.1 · 79,397–79,765 bp · −
rpl16 · NC_064501.1 · 79,894–81,177 bp · −
rps3 · NC_064501.1 · 81,323–81,985 bp · −
rpl22 · NC_064501.1 · 81,970–82,437 bp · −
rps19 · NC_064501.1 · 82,503–82,778 bp · −
rpl2 · NC_064501.1 · 82,845–84,333 bp · −
rpl23 · NC_064501.1 · 84,352–84,633 bp · −
trnI-CAU · NC_064501.1 · 84,799–84,872 bp · −
trnL-CAA · NC_064501.1 · 91,980–92,060 bp · −
ndhB · NC_064501.1 · 92,622–94,829 bp · −
rps7 · NC_064501.1 · 95,094–95,561 bp · −
trnN-GUU · NC_064501.1 · 106,476–106,547 bp · −
ndhF · NC_064501.1 · 107,904–110,135 bp · −
ndhD · NC_064501.1 · 112,799–114,328 bp · −
psaC · NC_064501.1 · 114,423–114,668 bp · −
ndhE · NC_064501.1 · 114,921–115,226 bp · −
ndhG · NC_064501.1 · 115,447–115,977 bp · −
ndhI · NC_064501.1 · 116,329–116,835 bp · −
ndhA · NC_064501.1 · 116,916–119,032 bp · −
ndhH · NC_064501.1 · 119,034–120,215 bp · −
rps15 · NC_064501.1 · 120,315–120,587 bp · −
ycf1 · NC_064501.1 · 120,983–125,605 bp · −
trnR-ACG · NC_064501.1 · 127,445–127,518 bp · −
rrn5 · NC_064501.1 · 127,758–127,878 bp · −
rrn4.5 · NC_064501.1 · 128,134–128,236 bp · −
rrn23 · NC_064501.1 · 128,335–131,145 bp · −
trnA-UGC · NC_064501.1 · 131,313–132,196 bp · −
trnI-GAU · NC_064501.1 · 132,259–133,279 bp · −
rrn16 · NC_064501.1 · 133,578–135,068 bp · −
trnV-GAC · NC_064501.1 · 135,295–135,366 bp · −
ycf2 · NC_064501.1 · 141,594–148,406 bp · −
psbK · NC_064501.1 · 7,230–7,415 bp · +
psbI · NC_064501.1 · 7,750–7,914 bp · +
trnG-UCC · NC_064501.1 · 8,682–9,432 bp · +
trnR-UCU · NC_064501.1 · 9,620–9,691 bp · +
trnC-GCA · NC_064501.1 · 27,309–27,379 bp · +
petN · NC_064501.1 · 27,536–27,631 bp · +
trnT-GGU · NC_064501.1 · 30,070–30,141 bp · +
psbD · NC_064501.1 · 31,425–32,486 bp · +
psbC · NC_064501.1 · 32,434–33,855 bp · +
psbZ · NC_064501.1 · 34,532–34,720 bp · +
trnG-GCC · NC_064501.1 · 34,996–35,066 bp · +
trnS-GGA · NC_064501.1 · 43,852–43,938 bp · +
trnL-UAA · NC_064501.1 · 46,028–46,608 bp · +
trnF-GAA · NC_064501.1 · 46,907–46,979 bp · +
trnM-CAU · NC_064501.1 · 51,109–51,181 bp · +
rbcL · NC_064501.1 · 54,055–55,515 bp · +
accD · NC_064501.1 · 56,226–57,707 bp · +
psaI · NC_064501.1 · 58,414–58,524 bp · +
ycf4 · NC_064501.1 · 58,978–59,532 bp · +
cemA · NC_064501.1 · 60,216–60,905 bp · +
petA · NC_064501.1 · 61,128–62,090 bp · +
petL · NC_064501.1 · 64,798–64,893 bp · +
petG · NC_064501.1 · 65,069–65,182 bp · +
psaJ · NC_064501.1 · 65,913–66,047 bp · +
rpl33 · NC_064501.1 · 66,512–66,712 bp · +
rps18 · NC_064501.1 · 66,883–67,188 bp · +
rps12 · NC_064501.1 · 136,959–137,752 bp · +
psbB · NC_064501.1 · 71,229–72,755 bp · +
psbT · NC_064501.1 · 72,942–73,043 bp · +
psbH · NC_064501.1 · 73,344–73,565 bp · +
petB · NC_064501.1 · 73,692–75,076 bp · +
petD · NC_064501.1 · 75,265–76,459 bp · +
ycf2 · NC_064501.1 · 84,961–91,773 bp · +
trnV-GAC · NC_064501.1 · 98,001–98,072 bp · +
rrn16 · NC_064501.1 · 98,299–99,789 bp · +
trnI-GAU · NC_064501.1 · 100,088–101,108 bp · +
trnA-UGC · NC_064501.1 · 101,171–102,054 bp · +
rrn23 · NC_064501.1 · 102,222–105,032 bp · +
rrn4.5 · NC_064501.1 · 105,131–105,233 bp · +
rrn5 · NC_064501.1 · 105,489–105,609 bp · +
trnR-ACG · NC_064501.1 · 105,849–105,922 bp · +
rpl32 · NC_064501.1 · 110,537–110,710 bp · +
trnL-UAG · NC_064501.1 · 111,401–111,480 bp · +
ccsA · NC_064501.1 · 111,577–112,548 bp · +
trnN-GUU · NC_064501.1 · 126,820–126,891 bp · +
rps7 · NC_064501.1 · 137,806–138,273 bp · +
ndhB · NC_064501.1 · 138,592–140,745 bp · +
trnL-CAA · NC_064501.1 · 141,307–141,387 bp · +
trnI-CAU · NC_064501.1 · 148,495–148,568 bp · +
rpl23 · NC_064501.1 · 148,734–149,015 bp · +
rpl2 · NC_064501.1 · 149,034–150,522 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia byeonsanensis
ANNOTATED PLASTOME
NC_064501.1
150,628 bp · 128 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37657 75314 112971 150628 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
129 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 13 84 72 Locate
psbA gene − 406 1464 1059 Locate
trnK-UUU gene − 1692 4279 2588 Locate
matK gene − 2001 3542 1542 Locate
trnQ-UUG gene − 6792 6863 72 Locate
psbK gene + 7230 7415 186 Locate
psbI gene + 7750 7914 165 Locate
trnS-GCU gene − 8051 8144 94 Locate
trnG-UCC gene + 8682 9432 751 Locate
trnR-UCU gene + 9620 9691 72 Locate
atpA gene − 9808 11331 1524 Locate
atpF gene − 11431 12683 1253 Locate
atpH gene − 12951 13196 246 Locate
atpI gene − 13820 14563 744 Locate
rps2 gene − 14796 15506 711 Locate
rpoC2 gene − 15736 19908 4173 Locate
rpoC1 gene − 20086 22925 2840 Locate
rpoB gene − 22952 26164 3213 Locate
trnC-GCA gene + 27309 27379 71 Locate
petN gene + 27536 27631 96 Locate
psbM gene − 28636 28740 105 Locate
trnD-GUC gene − 29266 29339 74 Locate
trnY-GUA gene − 29450 29533 84 Locate
trnE-UUC gene − 29601 29673 73 Locate
trnT-GGU gene + 30070 30141 72 Locate
psbD gene + 31425 32486 1062 Locate
psbC gene + 32434 33855 1422 Locate
trnS-UGA gene − 34103 34185 83 Locate
psbZ gene + 34532 34720 189 Locate
trnG-GCC gene + 34996 35066 71 Locate
trnfM-CAU gene − 35239 35312 74 Locate
rps14 gene − 35459 35761 303 Locate
psaB gene − 35884 38088 2205 Locate
psaA gene − 38114 40366 2253 Locate
ycf3 gene − 41046 43023 1978 Locate
trnS-GGA gene + 43852 43938 87 Locate
rps4 gene − 44255 44860 606 Locate
trnT-UGU gene − 45272 45344 73 Locate
trnL-UAA gene + 46028 46608 581 Locate
trnF-GAA gene + 46907 46979 73 Locate
ndhJ gene − 47662 48138 477 Locate
ndhK gene − 48250 48927 678 Locate
ndhC gene − 48979 49341 363 Locate
trnV-UAC gene − 50277 50928 652 Locate
trnM-CAU gene + 51109 51181 73 Locate
atpE gene − 51401 51802 402 Locate
atpB gene − 51799 53295 1497 Locate
rbcL gene + 54055 55515 1461 Locate
accD gene + 56226 57707 1482 Locate
psaI gene + 58414 58524 111 Locate
ycf4 gene + 58978 59532 555 Locate
cemA gene + 60216 60905 690 Locate
petA gene + 61128 62090 963 Locate
psbJ gene − 63113 63235 123 Locate
psbL gene − 63370 63486 117 Locate
psbF gene − 63510 63629 120 Locate
psbE gene − 63644 63895 252 Locate
petL gene + 64798 64893 96 Locate
petG gene + 65069 65182 114 Locate
trnW-CCA gene − 65310 65383 74 Locate
trnP-UGG gene − 65551 65624 74 Locate
psaJ gene + 65913 66047 135 Locate
rpl33 gene + 66512 66712 201 Locate
rps18 gene + 66883 67188 306 Locate
rpl20 gene − 67405 67791 387 Locate
rps12 gene − 68602 68715 114 Locate
clpP gene − 68831 70771 1941 Locate
psbB gene + 71229 72755 1527 Locate
psbT gene + 72942 73043 102 Locate
psbN gene − 73109 73240 132 Locate
psbH gene + 73344 73565 222 Locate
petB gene + 73692 75076 1385 Locate
petD gene + 75265 76459 1195 Locate
rpoA gene − 76648 77655 1008 Locate
rps11 gene − 77727 78134 408 Locate
rpl36 gene − 78248 78361 114 Locate
infA gene − 78464 78697 234 Locate
rps8 gene − 78821 79225 405 Locate
rpl14 gene − 79397 79765 369 Locate
rpl16 gene − 79894 81177 1284 Locate
rps3 gene − 81323 81985 663 Locate
rpl22 gene − 81970 82437 468 Locate
rps19 gene − 82503 82778 276 Locate
rpl2 gene − 82845 84333 1489 Locate
rpl23 gene − 84352 84633 282 Locate
trnI-CAU gene − 84799 84872 74 Locate
ycf2 gene + 84961 91773 6813 Locate
trnL-CAA gene − 91980 92060 81 Locate
ndhB gene − 92622 94829 2208 Locate
rps7 gene − 95094 95561 468 Locate
trnV-GAC gene + 98001 98072 72 Locate
rrn16 gene + 98299 99789 1491 Locate
trnI-GAU gene + 100088 101108 1021 Locate
trnA-UGC gene + 101171 102054 884 Locate
rrn23 gene + 102222 105032 2811 Locate
rrn4.5 gene + 105131 105233 103 Locate
rrn5 gene + 105489 105609 121 Locate
trnR-ACG gene + 105849 105922 74 Locate
trnN-GUU gene − 106476 106547 72 Locate
ndhF gene − 107904 110135 2232 Locate
rpl32 gene + 110537 110710 174 Locate
trnL-UAG gene + 111401 111480 80 Locate
ccsA gene + 111577 112548 972 Locate
ndhD gene − 112799 114328 1530 Locate
psaC gene − 114423 114668 246 Locate
ndhE gene − 114921 115226 306 Locate
ndhG gene − 115447 115977 531 Locate
ndhI gene − 116329 116835 507 Locate
ndhA gene − 116916 119032 2117 Locate
ndhH gene − 119034 120215 1182 Locate
rps15 gene − 120315 120587 273 Locate
ycf1 gene − 120983 125605 4623 Locate
trnN-GUU gene + 126820 126891 72 Locate
trnR-ACG gene − 127445 127518 74 Locate
rrn5 gene − 127758 127878 121 Locate
rrn4.5 gene − 128134 128236 103 Locate
rrn23 gene − 128335 131145 2811 Locate
trnA-UGC gene − 131313 132196 884 Locate
trnI-GAU gene − 132259 133279 1021 Locate
rrn16 gene − 133578 135068 1491 Locate
trnV-GAC gene − 135295 135366 72 Locate
rps12 gene + 136959 137752 794 Locate
rps7 gene + 137806 138273 468 Locate
ndhB gene + 138592 140745 2154 Locate
trnL-CAA gene + 141307 141387 81 Locate
ycf2 gene − 141594 148406 6813 Locate
trnI-CAU gene + 148495 148568 74 Locate
rpl23 gene + 148734 149015 282 Locate
rpl2 gene + 149034 150522 1489 Locate
Status Available
Accession NC_064501.1
Length 150,628 bp
GC content 37.8%
Annotated genes 128
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Atp Synthase 6 Ribosomal Protein 24 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 2
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources