Elsholtzia eriostachya chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_071845.1 · 2–75 bp · −
psbA · NC_071845.1 · 350–1,408 bp · −
trnK-UUU · NC_071845.1 · 1,639–4,201 bp · −
matK · NC_071845.1 · 1,941–3,473 bp · −
rps16 · NC_071845.1 · 4,711–5,865 bp · −
trnQ-UUG · NC_071845.1 · 6,581–6,652 bp · −
trnS-GCU · NC_071845.1 · 7,827–7,914 bp · −
atpA · NC_071845.1 · 9,696–11,219 bp · −
atpF · NC_071845.1 · 11,300–12,549 bp · −
atpH · NC_071845.1 · 12,821–13,066 bp · −
atpI · NC_071845.1 · 14,046–14,789 bp · −
rps2 · NC_071845.1 · 15,019–15,729 bp · −
rpoC2 · NC_071845.1 · 16,008–20,156 bp · −
rpoC1 · NC_071845.1 · 20,326–23,154 bp · −
rpoB · NC_071845.1 · 23,181–26,393 bp · −
psbM · NC_071845.1 · 28,443–28,547 bp · −
trnD-GUC · NC_071845.1 · 29,078–29,151 bp · −
trnY-GUA · NC_071845.1 · 29,272–29,355 bp · −
trnE-UUC · NC_071845.1 · 29,427–29,499 bp · −
trnS-UGA · NC_071845.1 · 33,961–34,042 bp · −
trnfM-CAU · NC_071845.1 · 35,104–35,177 bp · −
rps14 · NC_071845.1 · 35,333–35,635 bp · −
psaB · NC_071845.1 · 35,759–37,963 bp · −
psaA · NC_071845.1 · 37,989–40,241 bp · −
ycf3 · NC_071845.1 · 40,856–42,843 bp · −
rps4 · NC_071845.1 · 43,555–44,160 bp · −
trnT-UGU · NC_071845.1 · 44,541–44,613 bp · −
ndhJ · NC_071845.1 · 46,706–47,182 bp · −
ndhK · NC_071845.1 · 47,288–47,965 bp · −
ndhC · NC_071845.1 · 48,015–48,377 bp · −
trnV-UAC · NC_071845.1 · 49,231–49,877 bp · −
atpE · NC_071845.1 · 50,337–50,738 bp · −
atpB · NC_071845.1 · 50,735–52,231 bp · −
psbJ · NC_071845.1 · 61,335–61,457 bp · −
psbL · NC_071845.1 · 61,592–61,708 bp · −
psbF · NC_071845.1 · 61,732–61,851 bp · −
psbE · NC_071845.1 · 61,866–62,117 bp · −
trnW-CCA · NC_071845.1 · 63,532–63,605 bp · −
trnP-UGG · NC_071845.1 · 63,784–63,857 bp · −
rpl20 · NC_071845.1 · 65,658–66,044 bp · −
rps12 · NC_071845.1 · 66,849–66,974 bp · −
rps12 · NC_071845.1 · 93,542–94,332 bp · −
clpP · NC_071845.1 · 67,100–69,028 bp · −
psbN · NC_071845.1 · 71,369–71,500 bp · −
rpoA · NC_071845.1 · 74,862–75,869 bp · −
rps11 · NC_071845.1 · 75,940–76,356 bp · −
rpl36 · NC_071845.1 · 76,470–76,583 bp · −
infA · NC_071845.1 · 76,693–76,926 bp · −
rps8 · NC_071845.1 · 77,047–77,451 bp · −
rpl14 · NC_071845.1 · 77,622–77,990 bp · −
rpl16 · NC_071845.1 · 78,123–79,352 bp · −
rps3 · NC_071845.1 · 79,500–80,162 bp · −
rpl22 · NC_071845.1 · 80,147–80,614 bp · −
rps19 · NC_071845.1 · 80,681–80,959 bp · −
rpl2 · NC_071845.1 · 81,013–82,501 bp · −
rpl23 · NC_071845.1 · 82,524–82,805 bp · −
trnI-CAU · NC_071845.1 · 82,964–83,037 bp · −
trnL-CAA · NC_071845.1 · 89,896–89,976 bp · −
ndhB · NC_071845.1 · 90,549–92,756 bp · −
rps7 · NC_071845.1 · 93,021–93,488 bp · −
trnN-GUU · NC_071845.1 · 104,416–104,487 bp · −
ndhF · NC_071845.1 · 105,855–108,065 bp · −
ndhD · NC_071845.1 · 110,719–112,026 bp · −
psaC · NC_071845.1 · 112,342–112,587 bp · −
ndhE · NC_071845.1 · 112,842–113,147 bp · −
ndhG · NC_071845.1 · 113,382–113,912 bp · −
ndhI · NC_071845.1 · 114,281–114,763 bp · −
ndhA · NC_071845.1 · 114,853–116,958 bp · −
ndhH · NC_071845.1 · 116,960–118,195 bp · −
rps15 · NC_071845.1 · 118,241–118,513 bp · −
ycf1 · NC_071845.1 · 118,906–124,491 bp · −
trnR-ACG · NC_071845.1 · 125,348–125,421 bp · −
rrn5 · NC_071845.1 · 125,666–125,786 bp · −
rrn4.5 · NC_071845.1 · 126,011–126,113 bp · −
rrn23 · NC_071845.1 · 126,212–129,022 bp · −
trnA-UGC · NC_071845.1 · 129,180–130,065 bp · −
trnI-GAU · NC_071845.1 · 130,130–131,155 bp · −
rrn16 · NC_071845.1 · 131,454–132,944 bp · −
trnV-GAC · NC_071845.1 · 133,171–133,242 bp · −
ycf15 · NC_071845.1 · 139,580–139,828 bp · −
ycf2 · NC_071845.1 · 139,919–146,071 bp · −
psbK · NC_071845.1 · 7,012–7,197 bp · +
psbI · NC_071845.1 · 7,584–7,694 bp · +
trnG-UCC · NC_071845.1 · 8,601–9,340 bp · +
trnR-UCU · NC_071845.1 · 9,520–9,591 bp · +
trnC-GCA · NC_071845.1 · 27,198–27,268 bp · +
petN · NC_071845.1 · 27,425–27,514 bp · +
trnT-GGU · NC_071845.1 · 30,062–30,133 bp · +
psbD · NC_071845.1 · 31,272–32,333 bp · +
psbC · NC_071845.1 · 32,281–33,702 bp · +
psbZ · NC_071845.1 · 34,398–34,586 bp · +
trnG-GCC · NC_071845.1 · 34,867–34,937 bp · +
trnS-GGA · NC_071845.1 · 43,158–43,244 bp · +
trnL-UAA · NC_071845.1 · 45,312–45,877 bp · +
trnF-GAA · NC_071845.1 · 46,180–46,252 bp · +
trnM-CAU · NC_071845.1 · 50,058–50,130 bp · +
rbcL · NC_071845.1 · 53,033–54,493 bp · +
accD · NC_071845.1 · 55,205–56,677 bp · +
psaI · NC_071845.1 · 57,239–57,349 bp · +
ycf4 · NC_071845.1 · 57,792–58,346 bp · +
cemA · NC_071845.1 · 58,729–59,418 bp · +
petA · NC_071845.1 · 59,646–60,608 bp · +
petL · NC_071845.1 · 63,017–63,112 bp · +
petG · NC_071845.1 · 63,280–63,393 bp · +
psaJ · NC_071845.1 · 64,126–64,260 bp · +
rpl33 · NC_071845.1 · 64,707–64,907 bp · +
rps18 · NC_071845.1 · 65,110–65,415 bp · +
rps12 · NC_071845.1 · 134,865–135,655 bp · +
psbB · NC_071845.1 · 69,495–71,021 bp · +
psbT · NC_071845.1 · 71,202–71,303 bp · +
psbH · NC_071845.1 · 71,606–71,827 bp · +
petB · NC_071845.1 · 71,961–73,308 bp · +
petD · NC_071845.1 · 73,497–74,699 bp · +
ycf2 · NC_071845.1 · 83,126–89,278 bp · +
ycf15 · NC_071845.1 · 89,369–89,617 bp · +
trnV-GAC · NC_071845.1 · 95,955–96,026 bp · +
rrn16 · NC_071845.1 · 96,253–97,743 bp · +
trnI-GAU · NC_071845.1 · 98,042–99,067 bp · +
trnA-UGC · NC_071845.1 · 99,132–100,017 bp · +
rrn23 · NC_071845.1 · 100,175–102,985 bp · +
rrn4.5 · NC_071845.1 · 103,084–103,186 bp · +
rrn5 · NC_071845.1 · 103,411–103,531 bp · +
trnR-ACG · NC_071845.1 · 103,776–103,849 bp · +
ycf1 · NC_071845.1 · 104,817–105,878 bp · +
rpl32 · NC_071845.1 · 108,478–108,681 bp · +
trnL-UAG · NC_071845.1 · 109,342–109,421 bp · +
ccsA · NC_071845.1 · 109,500–110,471 bp · +
trnN-GUU · NC_071845.1 · 124,710–124,781 bp · +
rps7 · NC_071845.1 · 135,709–136,176 bp · +
ndhB · NC_071845.1 · 136,441–138,648 bp · +
trnL-CAA · NC_071845.1 · 139,221–139,301 bp · +
trnI-CAU · NC_071845.1 · 146,160–146,233 bp · +
rpl23 · NC_071845.1 · 146,392–146,673 bp · +
rpl2 · NC_071845.1 · 146,696–148,184 bp · +
0 kb
12 kb
24 kb
36 kb
48 kb
60 kb
72 kb
84 kb
96 kb
108 kb
120 kb
132 kb
144 kb
Elsholtzia eriostachya
ANNOTATED PLASTOME
NC_071845.1
148,288 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37072 74144 111216 148288 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 350 1408 1059 Locate
trnK-UUU gene − 1639 4201 2563 Locate
matK gene − 1941 3473 1533 Locate
rps16 gene − 4711 5865 1155 Locate
trnQ-UUG gene − 6581 6652 72 Locate
psbK gene + 7012 7197 186 Locate
psbI gene + 7584 7694 111 Locate
trnS-GCU gene − 7827 7914 88 Locate
trnG-UCC gene + 8601 9340 740 Locate
trnR-UCU gene + 9520 9591 72 Locate
atpA gene − 9696 11219 1524 Locate
atpF gene − 11300 12549 1250 Locate
atpH gene − 12821 13066 246 Locate
atpI gene − 14046 14789 744 Locate
rps2 gene − 15019 15729 711 Locate
rpoC2 gene − 16008 20156 4149 Locate
rpoC1 gene − 20326 23154 2829 Locate
rpoB gene − 23181 26393 3213 Locate
trnC-GCA gene + 27198 27268 71 Locate
petN gene + 27425 27514 90 Locate
psbM gene − 28443 28547 105 Locate
trnD-GUC gene − 29078 29151 74 Locate
trnY-GUA gene − 29272 29355 84 Locate
trnE-UUC gene − 29427 29499 73 Locate
trnT-GGU gene + 30062 30133 72 Locate
psbD gene + 31272 32333 1062 Locate
psbC gene + 32281 33702 1422 Locate
trnS-UGA gene − 33961 34042 82 Locate
psbZ gene + 34398 34586 189 Locate
trnG-GCC gene + 34867 34937 71 Locate
trnfM-CAU gene − 35104 35177 74 Locate
rps14 gene − 35333 35635 303 Locate
psaB gene − 35759 37963 2205 Locate
psaA gene − 37989 40241 2253 Locate
ycf3 gene − 40856 42843 1988 Locate
trnS-GGA gene + 43158 43244 87 Locate
rps4 gene − 43555 44160 606 Locate
trnT-UGU gene − 44541 44613 73 Locate
trnL-UAA gene + 45312 45877 566 Locate
trnF-GAA gene + 46180 46252 73 Locate
ndhJ gene − 46706 47182 477 Locate
ndhK gene − 47288 47965 678 Locate
ndhC gene − 48015 48377 363 Locate
trnV-UAC gene − 49231 49877 647 Locate
trnM-CAU gene + 50058 50130 73 Locate
atpE gene − 50337 50738 402 Locate
atpB gene − 50735 52231 1497 Locate
rbcL gene + 53033 54493 1461 Locate
accD gene + 55205 56677 1473 Locate
psaI gene + 57239 57349 111 Locate
ycf4 gene + 57792 58346 555 Locate
cemA gene + 58729 59418 690 Locate
petA gene + 59646 60608 963 Locate
psbJ gene − 61335 61457 123 Locate
psbL gene − 61592 61708 117 Locate
psbF gene − 61732 61851 120 Locate
psbE gene − 61866 62117 252 Locate
petL gene + 63017 63112 96 Locate
petG gene + 63280 63393 114 Locate
trnW-CCA gene − 63532 63605 74 Locate
trnP-UGG gene − 63784 63857 74 Locate
psaJ gene + 64126 64260 135 Locate
rpl33 gene + 64707 64907 201 Locate
rps18 gene + 65110 65415 306 Locate
rpl20 gene − 65658 66044 387 Locate
rps12 gene − 66849 66974 126 Locate
clpP gene − 67100 69028 1929 Locate
psbB gene + 69495 71021 1527 Locate
psbT gene + 71202 71303 102 Locate
psbN gene − 71369 71500 132 Locate
psbH gene + 71606 71827 222 Locate
petB gene + 71961 73308 1348 Locate
petD gene + 73497 74699 1203 Locate
rpoA gene − 74862 75869 1008 Locate
rps11 gene − 75940 76356 417 Locate
rpl36 gene − 76470 76583 114 Locate
infA gene − 76693 76926 234 Locate
rps8 gene − 77047 77451 405 Locate
rpl14 gene − 77622 77990 369 Locate
rpl16 gene − 78123 79352 1230 Locate
rps3 gene − 79500 80162 663 Locate
rpl22 gene − 80147 80614 468 Locate
rps19 gene − 80681 80959 279 Locate
rpl2 gene − 81013 82501 1489 Locate
rpl23 gene − 82524 82805 282 Locate
trnI-CAU gene − 82964 83037 74 Locate
ycf2 gene + 83126 89278 6153 Locate
ycf15 gene + 89369 89617 249 Locate
trnL-CAA gene − 89896 89976 81 Locate
ndhB gene − 90549 92756 2208 Locate
rps7 gene − 93021 93488 468 Locate
rps12 gene − 93542 94332 791 Locate
trnV-GAC gene + 95955 96026 72 Locate
rrn16 gene + 96253 97743 1491 Locate
trnI-GAU gene + 98042 99067 1026 Locate
trnA-UGC gene + 99132 100017 886 Locate
rrn23 gene + 100175 102985 2811 Locate
rrn4.5 gene + 103084 103186 103 Locate
rrn5 gene + 103411 103531 121 Locate
trnR-ACG gene + 103776 103849 74 Locate
trnN-GUU gene − 104416 104487 72 Locate
ycf1 gene + 104817 105878 1062 Locate
ndhF gene − 105855 108065 2211 Locate
rpl32 gene + 108478 108681 204 Locate
trnL-UAG gene + 109342 109421 80 Locate
ccsA gene + 109500 110471 972 Locate
ndhD gene − 110719 112026 1308 Locate
psaC gene − 112342 112587 246 Locate
ndhE gene − 112842 113147 306 Locate
ndhG gene − 113382 113912 531 Locate
ndhI gene − 114281 114763 483 Locate
ndhA gene − 114853 116958 2106 Locate
ndhH gene − 116960 118195 1236 Locate
rps15 gene − 118241 118513 273 Locate
ycf1 gene − 118906 124491 5586 Locate
trnN-GUU gene + 124710 124781 72 Locate
trnR-ACG gene − 125348 125421 74 Locate
rrn5 gene − 125666 125786 121 Locate
rrn4.5 gene − 126011 126113 103 Locate
rrn23 gene − 126212 129022 2811 Locate
trnA-UGC gene − 129180 130065 886 Locate
trnI-GAU gene − 130130 131155 1026 Locate
rrn16 gene − 131454 132944 1491 Locate
trnV-GAC gene − 133171 133242 72 Locate
rps12 gene + 134865 135655 791 Locate
rps7 gene + 135709 136176 468 Locate
ndhB gene + 136441 138648 2208 Locate
trnL-CAA gene + 139221 139301 81 Locate
ycf15 gene − 139580 139828 249 Locate
ycf2 gene − 139919 146071 6153 Locate
trnI-CAU gene + 146160 146233 74 Locate
rpl23 gene + 146392 146673 282 Locate
rpl2 gene + 146696 148184 1489 Locate
Status Available
Accession NC_071845.1
Length 148,288 bp
GC content 38.2%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources