Coordinate-aware organelle record

Elsholtzia heterophylla chloroplast genome

Available PP357160.1 151,510 bp 130 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 9-82 bp · − strandpsbA · gene · 419-1,477 bp · − strandtrnK-UUU · gene · 1,707-4,295 bp · − strandmatK · gene · 2,005-3,546 bp · − strandrps16 · gene · 4,822-5,956 bp · − strandtrnQ-UUG · gene · 6,803-6,874 bp · − strandpsbK · gene · 7,252-7,446 bp · + strandpsbI · gene · 7,838-7,948 bp · + strandtrnS-GCU · gene · 8,090-8,177 bp · − strandtrnG-UCC · gene · 8,865-9,614 bp · + strandtrnR-UCU · gene · 9,800-9,871 bp · + strandatpA · gene · 9,976-11,499 bp · − strandatpF · gene · 11,600-12,866 bp · − strandatpH · gene · 13,139-13,384 bp · − strandatpI · gene · 14,035-14,778 bp · − strandrps2 · gene · 15,010-15,720 bp · − strandrpoC2 · gene · 15,963-20,138 bp · − strandrpoC1 · gene · 20,303-23,114 bp · − strandrpoB · gene · 23,141-26,353 bp · − strandtrnC-GCA · gene · 27,369-27,439 bp · + strandpetN · gene · 27,588-27,683 bp · + strandpsbM · gene · 28,741-28,845 bp · − strandtrnD-GUC · gene · 29,371-29,444 bp · − strandtrnY-GUA · gene · 29,556-29,639 bp · − strandtrnE-UUC · gene · 29,716-29,788 bp · − strandtrnT-GGU · gene · 30,335-30,406 bp · + strandpsbD · gene · 31,503-32,564 bp · + strandpsbC · gene · 32,512-33,933 bp · + strandtrnS-UGA · gene · 34,182-34,263 bp · − strandpsbZ · gene · 34,611-34,799 bp · + strandtrnG-GCC · gene · 35,074-35,144 bp · + strandtrnfM-CAU · gene · 35,315-35,388 bp · − strandrps14 · gene · 35,533-35,835 bp · − strandpsaB · gene · 35,958-38,162 bp · − strandpsaA · gene · 38,188-40,440 bp · − strandycf3 · gene · 41,121-43,120 bp · − strandtrnS-GGA · gene · 43,979-44,065 bp · + strandrps4 · gene · 44,369-44,974 bp · − strandtrnT-UGU · gene · 45,391-45,463 bp · − strandtrnL-UAA · gene · 46,133-46,708 bp · + strandtrnF-GAA · gene · 47,004-47,076 bp · + strandndhJ · gene · 47,765-48,241 bp · − strandndhK · gene · 48,353-49,030 bp · − strandndhC · gene · 49,082-49,444 bp · − strandtrnV-UAC · gene · 50,384-51,033 bp · − strandtrnM-CAU · gene · 51,214-51,286 bp · + strandatpE · gene · 51,512-51,913 bp · − strandatpB · gene · 51,910-53,406 bp · − strandrbcL · gene · 54,183-55,655 bp · + strandaccD · gene · 56,358-57,839 bp · + strandpsaI · gene · 58,517-58,627 bp · + strandycf4 · gene · 59,085-59,639 bp · + strandcemA · gene · 60,300-60,989 bp · + strandpetA · gene · 61,217-62,179 bp · + strandpsbJ · gene · 63,209-63,331 bp · − strandpsbL · gene · 63,466-63,582 bp · − strandpsbF · gene · 63,606-63,725 bp · − strandpsbE · gene · 63,740-63,991 bp · − strandpetL · gene · 64,908-65,003 bp · + strandpetG · gene · 65,179-65,292 bp · + strandtrnW-CCA · gene · 65,420-65,493 bp · − strandtrnP-UGG · gene · 65,658-65,731 bp · − strandpsaJ · gene · 66,025-66,159 bp · + strandrpl33 · gene · 66,619-66,819 bp · + strandrps18 · gene · 66,984-67,289 bp · + strandrpl20 · gene · 67,508-67,894 bp · − strandrps12 · gene · 68,702-96,960 bp · − strandrps12 · gene · 68,702-138,267 bp · + strandclpP · gene · 68,943-70,905 bp · − strandpsbB · gene · 71,363-72,889 bp · + strandpsbT · gene · 73,073-73,174 bp · + strandpsbN · gene · 73,240-73,371 bp · − strandpsbH · gene · 73,482-73,703 bp · + strandpetB · gene · 73,831-75,202 bp · + strandpetD · gene · 75,392-76,586 bp · + strandrpoA · gene · 76,782-77,783 bp · − strandrps11 · gene · 77,855-78,259 bp · − strandrpl36 · gene · 78,370-78,483 bp · − strandinfA · gene · 78,587-78,820 bp · − strandrps8 · gene · 78,949-79,353 bp · − strandrpl14 · gene · 79,531-79,899 bp · − strandrpl16 · gene · 80,028-81,313 bp · − strandrps3 · gene · 81,456-82,118 bp · − strandrpl22 · gene · 82,103-82,570 bp · − strandrps19 · gene · 82,637-82,915 bp · − strandrpl2 · gene · 82,978-84,466 bp · − strandrpl23 · gene · 84,485-84,766 bp · − strandtrnI-CAU · gene · 84,932-85,005 bp · − strandycf2 · gene · 85,094-91,924 bp · + strandtrnL-CAA · gene · 92,519-92,599 bp · − strandndhB · gene · 93,177-95,330 bp · − strandrps7 · gene · 95,649-96,116 bp · − strandtrnV-GAC · gene · 98,553-98,624 bp · + strandrrn16 · gene · 98,851-100,341 bp · + strandtrnI-GAU · gene · 100,640-101,658 bp · + strandtrnA-UGC · gene · 101,723-102,606 bp · + strandrrn23 · gene · 102,785-105,594 bp · + strandrrn4.5 · gene · 105,694-105,796 bp · + strandrrn5 · gene · 106,052-106,172 bp · + strandtrnR-ACG · gene · 106,416-106,489 bp · + strandtrnN-GUU · gene · 107,044-107,115 bp · − strandndhF · gene · 108,468-110,699 bp · − strandrpl32 · gene · 111,107-111,292 bp · + strandtrnL-UAG · gene · 111,967-112,046 bp · + strandccsA · gene · 112,133-113,104 bp · + strandndhD · gene · 113,360-114,889 bp · − strandpsaC · gene · 114,984-115,229 bp · − strandndhE · gene · 115,480-115,785 bp · − strandndhG · gene · 116,004-116,534 bp · − strandndhI · gene · 116,878-117,384 bp · − strandndhA · gene · 117,465-119,541 bp · − strandndhH · gene · 119,543-120,781 bp · − strandrps15 · gene · 120,827-121,099 bp · − strandycf1 · gene · 121,498-127,104 bp · − strandtrnN-GUU · gene · 127,322-127,393 bp · + strandtrnR-ACG · gene · 127,948-128,021 bp · − strandrrn5 · gene · 128,265-128,385 bp · − strandrrn4.5 · gene · 128,641-128,743 bp · − strandrrn23 · gene · 128,843-131,652 bp · − strandtrnA-UGC · gene · 131,831-132,714 bp · − strandtrnI-GAU · gene · 132,779-133,797 bp · − strandrrn16 · gene · 134,096-135,586 bp · − strandtrnV-GAC · gene · 135,813-135,884 bp · − strandrps7 · gene · 138,321-138,788 bp · + strandndhB · gene · 139,107-141,260 bp · + strandtrnL-CAA · gene · 141,838-141,918 bp · + strandycf2 · gene · 142,513-149,343 bp · − strandtrnI-CAU · gene · 149,432-149,505 bp · + strandrpl23 · gene · 149,671-149,952 bp · + strandrpl2 · gene · 149,971-151,459 bp · + strandElsholtzia heterophyllaANNOTATED PLASTOMEPP357160.1151,510 bp · 130 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PP357160.1Features: 130 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−88274
psbAgenephotosystem-ii−41814771059
trnK-UUUgenetranslation-rna−170642952589
matKgeneother−200435461542
rps16generibosomal-protein−482159561135
trnQ-UUGgenetranslation-rna−6802687472
psbKgenephotosystem-ii+72517446195
psbIgenephotosystem-ii+78377948111
trnS-GCUgenetranslation-rna−8089817788
trnG-UCCgenetranslation-rna+88649614750
trnR-UCUgenetranslation-rna+9799987172
atpAgeneatp-synthase−9975114991524
atpFgeneatp-synthase−11599128661267
atpHgeneatp-synthase−1313813384246
atpIgeneatp-synthase−1403414778744
rps2generibosomal-protein−1500915720711
rpoC2generna-polymerase−15962201384176
rpoC1generna-polymerase−20302231142812
rpoBgenerna-polymerase−23140263533213
trnC-GCAgenetranslation-rna+273682743971
petNgenecytochrome+275872768396
psbMgenephotosystem-ii−2874028845105
trnD-GUCgenetranslation-rna−293702944474
trnY-GUAgenetranslation-rna−295552963984
trnE-UUCgenetranslation-rna−297152978873
trnT-GGUgenetranslation-rna+303343040672
psbDgenephotosystem-ii+31502325641062
psbCgenephotosystem-ii+32511339331422
trnS-UGAgenetranslation-rna−341813426382
psbZgenephotosystem-ii+3461034799189
trnG-GCCgenetranslation-rna+350733514471
trnfM-CAUgenetranslation-rna−353143538874
rps14generibosomal-protein−3553235835303
psaBgenephotosystem-i−35957381622205
psaAgenephotosystem-i−38187404402253
ycf3geneother−41120431202000
trnS-GGAgenetranslation-rna+439784406587
rps4generibosomal-protein−4436844974606
trnT-UGUgenetranslation-rna−453904546373
trnL-UAAgenetranslation-rna+4613246708576
trnF-GAAgenetranslation-rna+470034707673
ndhJgenenad-dehydrogenase−4776448241477
ndhKgenenad-dehydrogenase−4835249030678
ndhCgenenad-dehydrogenase−4908149444363
trnV-UACgenetranslation-rna−5038351033650
trnM-CAUgenetranslation-rna+512135128673
atpEgeneatp-synthase−5151151913402
atpBgeneatp-synthase−51909534061497
rbcLgeneother+54182556551473
accDgeneother+56357578391482
psaIgenephotosystem-i+5851658627111
ycf4geneother+5908459639555
cemAgeneother+6029960989690
petAgenecytochrome+6121662179963
psbJgenephotosystem-ii−6320863331123
psbLgenephotosystem-ii−6346563582117
psbFgenephotosystem-ii−6360563725120
psbEgenephotosystem-ii−6373963991252
petLgenecytochrome+649076500396
petGgenecytochrome+6517865292114
trnW-CCAgenetranslation-rna−654196549374
trnP-UGGgenetranslation-rna−656576573174
psaJgenephotosystem-i+6602466159135
rpl33generibosomal-protein+6661866819201
rps18generibosomal-protein+6698367289306
rpl20generibosomal-protein−6750767894387
rps12generibosomal-protein−687019696028259
rps12generibosomal-protein+6870113826769566
clpPgeneother−68942709051963
psbBgenephotosystem-ii+71362728891527
psbTgenephotosystem-ii+7307273174102
psbNgenephotosystem-ii−7323973371132
psbHgenephotosystem-ii+7348173703222
petBgenecytochrome+73830752021372
petDgenecytochrome+75391765861195
rpoAgenerna-polymerase−76781777831002
rps11generibosomal-protein−7785478259405
rpl36generibosomal-protein−7836978483114
infAgeneother−7858678820234
rps8generibosomal-protein−7894879353405
rpl14generibosomal-protein−7953079899369
rpl16generibosomal-protein−80027813131286
rps3generibosomal-protein−8145582118663
rpl22generibosomal-protein−8210282570468
rps19generibosomal-protein−8263682915279
rpl2generibosomal-protein−82977844661489
rpl23generibosomal-protein−8448484766282
trnI-CAUgenetranslation-rna−849318500574
ycf2geneother+85093919246831
trnL-CAAgenetranslation-rna−925189259981
ndhBgenenad-dehydrogenase−93176953302154
rps7generibosomal-protein−9564896116468
trnV-GACgenetranslation-rna+985529862472
rrn16generibosomal-rna+988501003411491
trnI-GAUgenetranslation-rna+1006391016581019
trnA-UGCgenetranslation-rna+101722102606884
rrn23generibosomal-rna+1027841055942810
rrn4.5generibosomal-rna+105693105796103
rrn5generibosomal-rna+106051106172121
trnR-ACGgenetranslation-rna+10641510648974
trnN-GUUgenetranslation-rna−10704310711572
ndhFgenenad-dehydrogenase−1084671106992232
rpl32generibosomal-protein+111106111292186
trnL-UAGgenetranslation-rna+11196611204680
ccsAgeneother+112132113104972
ndhDgenenad-dehydrogenase−1133591148891530
psaCgenephotosystem-i−114983115229246
ndhEgenenad-dehydrogenase−115479115785306
ndhGgenenad-dehydrogenase−116003116534531
ndhIgenenad-dehydrogenase−116877117384507
ndhAgenenad-dehydrogenase−1174641195412077
ndhHgenenad-dehydrogenase−1195421207811239
rps15generibosomal-protein−120826121099273
ycf1geneother−1214971271045607
trnN-GUUgenetranslation-rna+12732112739372
trnR-ACGgenetranslation-rna−12794712802174
rrn5generibosomal-rna−128264128385121
rrn4.5generibosomal-rna−128640128743103
rrn23generibosomal-rna−1288421316522810
trnA-UGCgenetranslation-rna−131830132714884
trnI-GAUgenetranslation-rna−1327781337971019
rrn16generibosomal-rna−1340951355861491
trnV-GACgenetranslation-rna−13581213588472
rps7generibosomal-protein+138320138788468
ndhBgenenad-dehydrogenase+1391061412602154
trnL-CAAgenetranslation-rna+14183714191881
ycf2geneother−1425121493436831
trnI-CAUgenetranslation-rna+14943114950574
rpl23generibosomal-protein+149670149952282
rpl2generibosomal-protein+1499701514591489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources