Elsholtzia minima chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_068005.1 · 2–75 bp · −
psbA · NC_068005.1 · 397–1,455 bp · −
trnK-UUU · NC_068005.1 · 1,684–4,270 bp · −
matK · NC_068005.1 · 1,992–3,533 bp · −
rps16 · NC_068005.1 · 4,786–5,932 bp · −
trnQ-UUG · NC_068005.1 · 6,774–6,845 bp · −
trnS-GCU · NC_068005.1 · 8,042–8,129 bp · −
atpA · NC_068005.1 · 9,794–11,317 bp · −
atpF · NC_068005.1 · 11,417–12,669 bp · −
atpH · NC_068005.1 · 12,937–13,182 bp · −
atpI · NC_068005.1 · 13,806–14,549 bp · −
rps2 · NC_068005.1 · 14,782–15,492 bp · −
rpoC2 · NC_068005.1 · 15,721–19,893 bp · −
rpoC1 · NC_068005.1 · 20,071–22,910 bp · −
rpoB · NC_068005.1 · 22,937–26,149 bp · −
psbM · NC_068005.1 · 28,621–28,725 bp · −
trnD-GUC · NC_068005.1 · 29,251–29,324 bp · −
trnY-GUA · NC_068005.1 · 29,435–29,518 bp · −
trnE-UUC · NC_068005.1 · 29,586–29,658 bp · −
trnS-UGA · NC_068005.1 · 33,922–34,003 bp · −
trnfM-CAU · NC_068005.1 · 35,055–35,128 bp · −
rps14 · NC_068005.1 · 35,275–35,577 bp · −
psaB · NC_068005.1 · 35,700–37,904 bp · −
psaA · NC_068005.1 · 37,930–40,182 bp · −
ycf3 · NC_068005.1 · 40,856–42,834 bp · −
rps4 · NC_068005.1 · 44,067–44,672 bp · −
trnT-UGU · NC_068005.1 · 45,080–45,152 bp · −
ndhJ · NC_068005.1 · 47,481–47,957 bp · −
ndhK · NC_068005.1 · 48,069–48,746 bp · −
ndhC · NC_068005.1 · 48,798–49,160 bp · −
trnV-UAC · NC_068005.1 · 50,096–50,747 bp · −
atpE · NC_068005.1 · 51,220–51,621 bp · −
atpB · NC_068005.1 · 51,618–53,114 bp · −
psbJ · NC_068005.1 · 62,930–63,052 bp · −
psbL · NC_068005.1 · 63,187–63,303 bp · −
psbF · NC_068005.1 · 63,327–63,446 bp · −
psbE · NC_068005.1 · 63,461–63,712 bp · −
trnW-CCA · NC_068005.1 · 65,127–65,200 bp · −
trnP-UGG · NC_068005.1 · 65,367–65,440 bp · −
rpl20 · NC_068005.1 · 67,221–67,607 bp · −
rps12 · NC_068005.1 · 68,418–68,531 bp · −
rps12 · NC_068005.1 · 95,806–96,599 bp · −
clpP · NC_068005.1 · 68,647–70,587 bp · −
psbN · NC_068005.1 · 72,925–73,056 bp · −
rpoA · NC_068005.1 · 76,463–77,470 bp · −
rps11 · NC_068005.1 · 77,542–77,949 bp · −
rpl36 · NC_068005.1 · 78,065–78,178 bp · −
infA · NC_068005.1 · 78,281–78,514 bp · −
rps8 · NC_068005.1 · 78,638–79,042 bp · −
rpl14 · NC_068005.1 · 79,213–79,581 bp · −
rpl16 · NC_068005.1 · 79,710–80,994 bp · −
rps3 · NC_068005.1 · 81,140–81,802 bp · −
rpl22 · NC_068005.1 · 81,787–82,254 bp · −
rps19 · NC_068005.1 · 82,320–82,598 bp · −
rpl2 · NC_068005.1 · 82,662–84,150 bp · −
rpl23 · NC_068005.1 · 84,169–84,450 bp · −
trnI-CAU · NC_068005.1 · 84,616–84,689 bp · −
trnL-CAA · NC_068005.1 · 92,171–92,251 bp · −
ndhB · NC_068005.1 · 92,813–94,966 bp · −
rps7 · NC_068005.1 · 95,285–95,752 bp · −
trnN-GUU · NC_068005.1 · 106,667–106,738 bp · −
ndhF · NC_068005.1 · 108,091–110,322 bp · −
ndhD · NC_068005.1 · 112,986–114,488 bp · −
psaC · NC_068005.1 · 114,610–114,855 bp · −
ndhE · NC_068005.1 · 115,107–115,412 bp · −
ndhG · NC_068005.1 · 115,633–116,163 bp · −
ndhI · NC_068005.1 · 116,516–117,022 bp · −
ndhA · NC_068005.1 · 117,103–119,220 bp · −
ndhH · NC_068005.1 · 119,222–120,403 bp · −
rps15 · NC_068005.1 · 120,503–120,775 bp · −
ycf1 · NC_068005.1 · 121,171–126,675 bp · −
trnR-ACG · NC_068005.1 · 127,629–127,702 bp · −
rrn5 · NC_068005.1 · 127,932–128,062 bp · −
rrn4.5 · NC_068005.1 · 128,318–128,420 bp · −
rrn23 · NC_068005.1 · 128,520–131,336 bp · −
trnA-UGC · NC_068005.1 · 131,497–132,380 bp · −
trnI-GAU · NC_068005.1 · 132,443–133,463 bp · −
rrn16 · NC_068005.1 · 133,762–135,252 bp · −
trnV-GAC · NC_068005.1 · 135,479–135,550 bp · −
ycf15 · NC_068005.1 · 141,828–142,076 bp · −
ycf2 · NC_068005.1 · 142,167–148,964 bp · −
psbK · NC_068005.1 · 7,212–7,397 bp · +
psbI · NC_068005.1 · 7,787–7,897 bp · +
trnG-UCC · NC_068005.1 · 8,668–9,416 bp · +
trnR-UCU · NC_068005.1 · 9,606–9,677 bp · +
trnC-GCA · NC_068005.1 · 27,294–27,364 bp · +
petN · NC_068005.1 · 27,521–27,616 bp · +
trnT-GGU · NC_068005.1 · 30,055–30,126 bp · +
psbD · NC_068005.1 · 31,243–32,304 bp · +
psbC · NC_068005.1 · 32,252–33,673 bp · +
psbZ · NC_068005.1 · 34,350–34,538 bp · +
trnG-GCC · NC_068005.1 · 34,812–34,882 bp · +
trnS-GGA · NC_068005.1 · 43,664–43,750 bp · +
trnL-UAA · NC_068005.1 · 45,846–46,427 bp · +
trnF-GAA · NC_068005.1 · 46,726–46,798 bp · +
trnM-CAU · NC_068005.1 · 50,928–51,000 bp · +
rbcL · NC_068005.1 · 53,874–55,334 bp · +
accD · NC_068005.1 · 56,044–57,525 bp · +
psaI · NC_068005.1 · 58,234–58,344 bp · +
ycf4 · NC_068005.1 · 58,797–59,351 bp · +
cemA · NC_068005.1 · 60,035–60,724 bp · +
petA · NC_068005.1 · 60,947–61,909 bp · +
petL · NC_068005.1 · 64,651–64,710 bp · +
petG · NC_068005.1 · 64,886–64,999 bp · +
psaJ · NC_068005.1 · 65,729–65,863 bp · +
rpl33 · NC_068005.1 · 66,328–66,528 bp · +
rps18 · NC_068005.1 · 66,699–67,004 bp · +
rps12 · NC_068005.1 · 137,143–137,936 bp · +
psbB · NC_068005.1 · 71,045–72,571 bp · +
psbT · NC_068005.1 · 72,758–72,859 bp · +
psbH · NC_068005.1 · 73,160–73,381 bp · +
petB · NC_068005.1 · 73,508–74,891 bp · +
petD · NC_068005.1 · 75,080–76,274 bp · +
ycf2 · NC_068005.1 · 84,778–91,575 bp · +
ycf15 · NC_068005.1 · 91,666–91,914 bp · +
trnV-GAC · NC_068005.1 · 98,192–98,263 bp · +
rrn16 · NC_068005.1 · 98,490–99,980 bp · +
trnI-GAU · NC_068005.1 · 100,279–101,299 bp · +
trnA-UGC · NC_068005.1 · 101,362–102,245 bp · +
rrn23 · NC_068005.1 · 102,406–105,222 bp · +
rrn4.5 · NC_068005.1 · 105,322–105,424 bp · +
rrn5 · NC_068005.1 · 105,680–105,810 bp · +
trnR-ACG · NC_068005.1 · 106,040–106,113 bp · +
ycf1 · NC_068005.1 · 107,067–108,197 bp · +
rpl32 · NC_068005.1 · 110,723–110,896 bp · +
trnL-UAG · NC_068005.1 · 111,587–111,666 bp · +
ccsA · NC_068005.1 · 111,763–112,734 bp · +
trnN-GUU · NC_068005.1 · 127,004–127,075 bp · +
rps7 · NC_068005.1 · 137,990–138,457 bp · +
ndhB · NC_068005.1 · 138,776–140,929 bp · +
trnL-CAA · NC_068005.1 · 141,491–141,571 bp · +
trnI-CAU · NC_068005.1 · 149,053–149,126 bp · +
rpl23 · NC_068005.1 · 149,292–149,573 bp · +
rpl2 · NC_068005.1 · 149,592–151,080 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia minima
ANNOTATED PLASTOME
NC_068005.1
151,199 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37800 75600 113399 151199 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 397 1455 1059 Locate
trnK-UUU gene − 1684 4270 2587 Locate
matK gene − 1992 3533 1542 Locate
rps16 gene − 4786 5932 1147 Locate
trnQ-UUG gene − 6774 6845 72 Locate
psbK gene + 7212 7397 186 Locate
psbI gene + 7787 7897 111 Locate
trnS-GCU gene − 8042 8129 88 Locate
trnG-UCC gene + 8668 9416 749 Locate
trnR-UCU gene + 9606 9677 72 Locate
atpA gene − 9794 11317 1524 Locate
atpF gene − 11417 12669 1253 Locate
atpH gene − 12937 13182 246 Locate
atpI gene − 13806 14549 744 Locate
rps2 gene − 14782 15492 711 Locate
rpoC2 gene − 15721 19893 4173 Locate
rpoC1 gene − 20071 22910 2840 Locate
rpoB gene − 22937 26149 3213 Locate
trnC-GCA gene + 27294 27364 71 Locate
petN gene + 27521 27616 96 Locate
psbM gene − 28621 28725 105 Locate
trnD-GUC gene − 29251 29324 74 Locate
trnY-GUA gene − 29435 29518 84 Locate
trnE-UUC gene − 29586 29658 73 Locate
trnT-GGU gene + 30055 30126 72 Locate
psbD gene + 31243 32304 1062 Locate
psbC gene + 32252 33673 1422 Locate
trnS-UGA gene − 33922 34003 82 Locate
psbZ gene + 34350 34538 189 Locate
trnG-GCC gene + 34812 34882 71 Locate
trnfM-CAU gene − 35055 35128 74 Locate
rps14 gene − 35275 35577 303 Locate
psaB gene − 35700 37904 2205 Locate
psaA gene − 37930 40182 2253 Locate
ycf3 gene − 40856 42834 1979 Locate
trnS-GGA gene + 43664 43750 87 Locate
rps4 gene − 44067 44672 606 Locate
trnT-UGU gene − 45080 45152 73 Locate
trnL-UAA gene + 45846 46427 582 Locate
trnF-GAA gene + 46726 46798 73 Locate
ndhJ gene − 47481 47957 477 Locate
ndhK gene − 48069 48746 678 Locate
ndhC gene − 48798 49160 363 Locate
trnV-UAC gene − 50096 50747 652 Locate
trnM-CAU gene + 50928 51000 73 Locate
atpE gene − 51220 51621 402 Locate
atpB gene − 51618 53114 1497 Locate
rbcL gene + 53874 55334 1461 Locate
accD gene + 56044 57525 1482 Locate
psaI gene + 58234 58344 111 Locate
ycf4 gene + 58797 59351 555 Locate
cemA gene + 60035 60724 690 Locate
petA gene + 60947 61909 963 Locate
psbJ gene − 62930 63052 123 Locate
psbL gene − 63187 63303 117 Locate
psbF gene − 63327 63446 120 Locate
psbE gene − 63461 63712 252 Locate
petL gene + 64651 64710 60 Locate
petG gene + 64886 64999 114 Locate
trnW-CCA gene − 65127 65200 74 Locate
trnP-UGG gene − 65367 65440 74 Locate
psaJ gene + 65729 65863 135 Locate
rpl33 gene + 66328 66528 201 Locate
rps18 gene + 66699 67004 306 Locate
rpl20 gene − 67221 67607 387 Locate
rps12 gene − 68418 68531 114 Locate
clpP gene − 68647 70587 1941 Locate
psbB gene + 71045 72571 1527 Locate
psbT gene + 72758 72859 102 Locate
psbN gene − 72925 73056 132 Locate
psbH gene + 73160 73381 222 Locate
petB gene + 73508 74891 1384 Locate
petD gene + 75080 76274 1195 Locate
rpoA gene − 76463 77470 1008 Locate
rps11 gene − 77542 77949 408 Locate
rpl36 gene − 78065 78178 114 Locate
infA gene − 78281 78514 234 Locate
rps8 gene − 78638 79042 405 Locate
rpl14 gene − 79213 79581 369 Locate
rpl16 gene − 79710 80994 1285 Locate
rps3 gene − 81140 81802 663 Locate
rpl22 gene − 81787 82254 468 Locate
rps19 gene − 82320 82598 279 Locate
rpl2 gene − 82662 84150 1489 Locate
rpl23 gene − 84169 84450 282 Locate
trnI-CAU gene − 84616 84689 74 Locate
ycf2 gene + 84778 91575 6798 Locate
ycf15 gene + 91666 91914 249 Locate
trnL-CAA gene − 92171 92251 81 Locate
ndhB gene − 92813 94966 2154 Locate
rps7 gene − 95285 95752 468 Locate
rps12 gene − 95806 96599 794 Locate
trnV-GAC gene + 98192 98263 72 Locate
rrn16 gene + 98490 99980 1491 Locate
trnI-GAU gene + 100279 101299 1021 Locate
trnA-UGC gene + 101362 102245 884 Locate
rrn23 gene + 102406 105222 2817 Locate
rrn4.5 gene + 105322 105424 103 Locate
rrn5 gene + 105680 105810 131 Locate
trnR-ACG gene + 106040 106113 74 Locate
trnN-GUU gene − 106667 106738 72 Locate
ycf1 gene + 107067 108197 1131 Locate
ndhF gene − 108091 110322 2232 Locate
rpl32 gene + 110723 110896 174 Locate
trnL-UAG gene + 111587 111666 80 Locate
ccsA gene + 111763 112734 972 Locate
ndhD gene − 112986 114488 1503 Locate
psaC gene − 114610 114855 246 Locate
ndhE gene − 115107 115412 306 Locate
ndhG gene − 115633 116163 531 Locate
ndhI gene − 116516 117022 507 Locate
ndhA gene − 117103 119220 2118 Locate
ndhH gene − 119222 120403 1182 Locate
rps15 gene − 120503 120775 273 Locate
ycf1 gene − 121171 126675 5505 Locate
trnN-GUU gene + 127004 127075 72 Locate
trnR-ACG gene − 127629 127702 74 Locate
rrn5 gene − 127932 128062 131 Locate
rrn4.5 gene − 128318 128420 103 Locate
rrn23 gene − 128520 131336 2817 Locate
trnA-UGC gene − 131497 132380 884 Locate
trnI-GAU gene − 132443 133463 1021 Locate
rrn16 gene − 133762 135252 1491 Locate
trnV-GAC gene − 135479 135550 72 Locate
rps12 gene + 137143 137936 794 Locate
rps7 gene + 137990 138457 468 Locate
ndhB gene + 138776 140929 2154 Locate
trnL-CAA gene + 141491 141571 81 Locate
ycf15 gene − 141828 142076 249 Locate
ycf2 gene − 142167 148964 6798 Locate
trnI-CAU gene + 149053 149126 74 Locate
rpl23 gene + 149292 149573 282 Locate
rpl2 gene + 149592 151080 1489 Locate
Status Available
Accession NC_068005.1
Length 151,199 bp
GC content 37.8%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources