Elsholtzia myosurus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP357155.1 · 11–84 bp · −
psbA · PP357155.1 · 402–1,460 bp · −
trnK-UUU · PP357155.1 · 1,689–4,276 bp · −
matK · PP357155.1 · 1,997–3,538 bp · −
rps16 · PP357155.1 · 4,800–5,927 bp · −
trnQ-UUG · PP357155.1 · 6,733–6,804 bp · −
trnS-GCU · PP357155.1 · 8,016–8,103 bp · −
atpA · PP357155.1 · 9,893–11,416 bp · −
atpF · PP357155.1 · 11,516–12,764 bp · −
atpH · PP357155.1 · 13,038–13,283 bp · −
atpI · PP357155.1 · 13,914–14,657 bp · −
rps2 · PP357155.1 · 14,890–15,600 bp · −
rpoC2 · PP357155.1 · 15,833–20,017 bp · −
rpoC1 · PP357155.1 · 20,182–22,987 bp · −
rpoB · PP357155.1 · 23,014–26,226 bp · −
psbM · PP357155.1 · 28,730–28,834 bp · −
trnD-GUC · PP357155.1 · 29,362–29,435 bp · −
trnY-GUA · PP357155.1 · 29,546–29,629 bp · −
trnE-UUC · PP357155.1 · 29,703–29,775 bp · −
trnS-UGA · PP357155.1 · 34,219–34,300 bp · −
trnfM-CAU · PP357155.1 · 35,343–35,416 bp · −
rps14 · PP357155.1 · 35,561–35,863 bp · −
psaB · PP357155.1 · 35,986–38,190 bp · −
psaA · PP357155.1 · 38,216–40,468 bp · −
ycf3 · PP357155.1 · 41,131–43,106 bp · −
rps4 · PP357155.1 · 44,341–44,946 bp · −
trnT-UGU · PP357155.1 · 45,322–45,394 bp · −
ndhJ · PP357155.1 · 47,692–48,168 bp · −
ndhK · PP357155.1 · 48,280–48,957 bp · −
ndhC · PP357155.1 · 49,009–49,371 bp · −
trnV-UAC · PP357155.1 · 50,320–50,969 bp · −
atpE · PP357155.1 · 51,440–51,841 bp · −
atpB · PP357155.1 · 51,838–53,334 bp · −
psbJ · PP357155.1 · 63,135–63,257 bp · −
psbL · PP357155.1 · 63,392–63,508 bp · −
psbF · PP357155.1 · 63,532–63,651 bp · −
psbE · PP357155.1 · 63,666–63,917 bp · −
trnW-CCA · PP357155.1 · 65,343–65,416 bp · −
trnP-UGG · PP357155.1 · 65,574–65,647 bp · −
rpl20 · PP357155.1 · 67,449–67,835 bp · −
rps12 · PP357155.1 · 68,640–68,765 bp · −
rps12 · PP357155.1 · 96,095–96,884 bp · −
clpP · PP357155.1 · 68,881–70,827 bp · −
psbN · PP357155.1 · 73,163–73,294 bp · −
rpoA · PP357155.1 · 76,681–77,688 bp · −
rps11 · PP357155.1 · 77,760–78,176 bp · −
rpl36 · PP357155.1 · 78,287–78,400 bp · −
infA · PP357155.1 · 78,504–78,737 bp · −
rps8 · PP357155.1 · 78,863–79,267 bp · −
rpl14 · PP357155.1 · 79,443–79,811 bp · −
rpl16 · PP357155.1 · 79,944–81,223 bp · −
rps3 · PP357155.1 · 81,366–82,028 bp · −
rpl22 · PP357155.1 · 82,013–82,480 bp · −
rps19 · PP357155.1 · 82,546–82,824 bp · −
rpl2 · PP357155.1 · 82,886–84,374 bp · −
rpl23 · PP357155.1 · 84,393–84,674 bp · −
trnI-CAU · PP357155.1 · 84,840–84,913 bp · −
trnL-CAA · PP357155.1 · 92,445–92,525 bp · −
ndhB · PP357155.1 · 93,102–95,255 bp · −
rps7 · PP357155.1 · 95,574–96,041 bp · −
trnN-GUU · PP357155.1 · 106,962–107,033 bp · −
ndhF · PP357155.1 · 108,386–110,617 bp · −
ndhD · PP357155.1 · 113,267–114,796 bp · −
psaC · PP357155.1 · 114,892–115,137 bp · −
ndhE · PP357155.1 · 115,388–115,693 bp · −
ndhG · PP357155.1 · 115,914–116,444 bp · −
ndhI · PP357155.1 · 116,784–117,290 bp · −
ndhA · PP357155.1 · 117,371–119,501 bp · −
ndhH · PP357155.1 · 119,503–120,714 bp · −
rps15 · PP357155.1 · 120,784–121,056 bp · −
ycf1 · PP357155.1 · 121,459–127,062 bp · −
trnR-ACG · PP357155.1 · 127,905–127,978 bp · −
rrn5 · PP357155.1 · 128,222–128,342 bp · −
rrn4.5 · PP357155.1 · 128,603–128,705 bp · −
rrn23 · PP357155.1 · 128,805–131,614 bp · −
trnA-UGC · PP357155.1 · 131,782–132,665 bp · −
trnI-GAU · PP357155.1 · 132,730–133,748 bp · −
rrn16 · PP357155.1 · 134,047–135,537 bp · −
trnV-GAC · PP357155.1 · 135,764–135,835 bp · −
ycf2 · PP357155.1 · 142,463–149,311 bp · −
psbK · PP357155.1 · 7,178–7,372 bp · +
psbI · PP357155.1 · 7,764–7,874 bp · +
trnG-UCC · PP357155.1 · 8,783–9,531 bp · +
trnR-UCU · PP357155.1 · 9,717–9,788 bp · +
trnC-GCA · PP357155.1 · 27,383–27,453 bp · +
petN · PP357155.1 · 27,610–27,705 bp · +
trnT-GGU · PP357155.1 · 30,314–30,385 bp · +
psbD · PP357155.1 · 31,542–32,603 bp · +
psbC · PP357155.1 · 32,551–33,972 bp · +
psbZ · PP357155.1 · 34,648–34,836 bp · +
trnG-GCC · PP357155.1 · 35,101–35,171 bp · +
trnS-GGA · PP357155.1 · 43,951–44,037 bp · +
trnL-UAA · PP357155.1 · 46,074–46,647 bp · +
trnF-GAA · PP357155.1 · 46,944–47,016 bp · +
trnM-CAU · PP357155.1 · 51,150–51,222 bp · +
rbcL · PP357155.1 · 54,116–55,576 bp · +
accD · PP357155.1 · 56,293–57,774 bp · +
psaI · PP357155.1 · 58,471–58,581 bp · +
ycf4 · PP357155.1 · 59,033–59,587 bp · +
cemA · PP357155.1 · 60,254–60,943 bp · +
petA · PP357155.1 · 61,182–62,144 bp · +
petL · PP357155.1 · 64,830–64,925 bp · +
petG · PP357155.1 · 65,102–65,215 bp · +
psaJ · PP357155.1 · 65,941–66,075 bp · +
rpl33 · PP357155.1 · 66,534–66,734 bp · +
rps18 · PP357155.1 · 66,905–67,210 bp · +
rps12 · PP357155.1 · 137,429–138,218 bp · +
psbB · PP357155.1 · 71,285–72,811 bp · +
psbT · PP357155.1 · 72,996–73,097 bp · +
psbH · PP357155.1 · 73,398–73,619 bp · +
petB · PP357155.1 · 73,747–75,115 bp · +
petD · PP357155.1 · 75,304–76,498 bp · +
ycf2 · PP357155.1 · 85,002–91,850 bp · +
trnV-GAC · PP357155.1 · 98,478–98,549 bp · +
rrn16 · PP357155.1 · 98,776–100,266 bp · +
trnI-GAU · PP357155.1 · 100,565–101,583 bp · +
trnA-UGC · PP357155.1 · 101,648–102,531 bp · +
rrn23 · PP357155.1 · 102,699–105,508 bp · +
rrn4.5 · PP357155.1 · 105,608–105,710 bp · +
rrn5 · PP357155.1 · 105,971–106,091 bp · +
trnR-ACG · PP357155.1 · 106,335–106,408 bp · +
rpl32 · PP357155.1 · 111,025–111,195 bp · +
trnL-UAG · PP357155.1 · 111,884–111,963 bp · +
ccsA · PP357155.1 · 112,051–113,022 bp · +
trnN-GUU · PP357155.1 · 127,280–127,351 bp · +
rps7 · PP357155.1 · 138,272–138,739 bp · +
ndhB · PP357155.1 · 139,058–141,211 bp · +
trnL-CAA · PP357155.1 · 141,788–141,868 bp · +
trnI-CAU · PP357155.1 · 149,400–149,473 bp · +
rpl23 · PP357155.1 · 149,639–149,920 bp · +
rpl2 · PP357155.1 · 149,939–151,427 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia myosurus
ANNOTATED PLASTOME
PP357155.1
151,531 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37883 75766 113648 151531 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 402 1460 1059 Locate
trnK-UUU gene − 1689 4276 2588 Locate
matK gene − 1997 3538 1542 Locate
rps16 gene − 4800 5927 1128 Locate
trnQ-UUG gene − 6733 6804 72 Locate
psbK gene + 7178 7372 195 Locate
psbI gene + 7764 7874 111 Locate
trnS-GCU gene − 8016 8103 88 Locate
trnG-UCC gene + 8783 9531 749 Locate
trnR-UCU gene + 9717 9788 72 Locate
atpA gene − 9893 11416 1524 Locate
atpF gene − 11516 12764 1249 Locate
atpH gene − 13038 13283 246 Locate
atpI gene − 13914 14657 744 Locate
rps2 gene − 14890 15600 711 Locate
rpoC2 gene − 15833 20017 4185 Locate
rpoC1 gene − 20182 22987 2806 Locate
rpoB gene − 23014 26226 3213 Locate
trnC-GCA gene + 27383 27453 71 Locate
petN gene + 27610 27705 96 Locate
psbM gene − 28730 28834 105 Locate
trnD-GUC gene − 29362 29435 74 Locate
trnY-GUA gene − 29546 29629 84 Locate
trnE-UUC gene − 29703 29775 73 Locate
trnT-GGU gene + 30314 30385 72 Locate
psbD gene + 31542 32603 1062 Locate
psbC gene + 32551 33972 1422 Locate
trnS-UGA gene − 34219 34300 82 Locate
psbZ gene + 34648 34836 189 Locate
trnG-GCC gene + 35101 35171 71 Locate
trnfM-CAU gene − 35343 35416 74 Locate
rps14 gene − 35561 35863 303 Locate
psaB gene − 35986 38190 2205 Locate
psaA gene − 38216 40468 2253 Locate
ycf3 gene − 41131 43106 1976 Locate
trnS-GGA gene + 43951 44037 87 Locate
rps4 gene − 44341 44946 606 Locate
trnT-UGU gene − 45322 45394 73 Locate
trnL-UAA gene + 46074 46647 574 Locate
trnF-GAA gene + 46944 47016 73 Locate
ndhJ gene − 47692 48168 477 Locate
ndhK gene − 48280 48957 678 Locate
ndhC gene − 49009 49371 363 Locate
trnV-UAC gene − 50320 50969 650 Locate
trnM-CAU gene + 51150 51222 73 Locate
atpE gene − 51440 51841 402 Locate
atpB gene − 51838 53334 1497 Locate
rbcL gene + 54116 55576 1461 Locate
accD gene + 56293 57774 1482 Locate
psaI gene + 58471 58581 111 Locate
ycf4 gene + 59033 59587 555 Locate
cemA gene + 60254 60943 690 Locate
petA gene + 61182 62144 963 Locate
psbJ gene − 63135 63257 123 Locate
psbL gene − 63392 63508 117 Locate
psbF gene − 63532 63651 120 Locate
psbE gene − 63666 63917 252 Locate
petL gene + 64830 64925 96 Locate
petG gene + 65102 65215 114 Locate
trnW-CCA gene − 65343 65416 74 Locate
trnP-UGG gene − 65574 65647 74 Locate
psaJ gene + 65941 66075 135 Locate
rpl33 gene + 66534 66734 201 Locate
rps18 gene + 66905 67210 306 Locate
rpl20 gene − 67449 67835 387 Locate
rps12 gene − 68640 68765 126 Locate
clpP gene − 68881 70827 1947 Locate
psbB gene + 71285 72811 1527 Locate
psbT gene + 72996 73097 102 Locate
psbN gene − 73163 73294 132 Locate
psbH gene + 73398 73619 222 Locate
petB gene + 73747 75115 1369 Locate
petD gene + 75304 76498 1195 Locate
rpoA gene − 76681 77688 1008 Locate
rps11 gene − 77760 78176 417 Locate
rpl36 gene − 78287 78400 114 Locate
infA gene − 78504 78737 234 Locate
rps8 gene − 78863 79267 405 Locate
rpl14 gene − 79443 79811 369 Locate
rpl16 gene − 79944 81223 1280 Locate
rps3 gene − 81366 82028 663 Locate
rpl22 gene − 82013 82480 468 Locate
rps19 gene − 82546 82824 279 Locate
rpl2 gene − 82886 84374 1489 Locate
rpl23 gene − 84393 84674 282 Locate
trnI-CAU gene − 84840 84913 74 Locate
ycf2 gene + 85002 91850 6849 Locate
trnL-CAA gene − 92445 92525 81 Locate
ndhB gene − 93102 95255 2154 Locate
rps7 gene − 95574 96041 468 Locate
rps12 gene − 96095 96884 790 Locate
trnV-GAC gene + 98478 98549 72 Locate
rrn16 gene + 98776 100266 1491 Locate
trnI-GAU gene + 100565 101583 1019 Locate
trnA-UGC gene + 101648 102531 884 Locate
rrn23 gene + 102699 105508 2810 Locate
rrn4.5 gene + 105608 105710 103 Locate
rrn5 gene + 105971 106091 121 Locate
trnR-ACG gene + 106335 106408 74 Locate
trnN-GUU gene − 106962 107033 72 Locate
ndhF gene − 108386 110617 2232 Locate
rpl32 gene + 111025 111195 171 Locate
trnL-UAG gene + 111884 111963 80 Locate
ccsA gene + 112051 113022 972 Locate
ndhD gene − 113267 114796 1530 Locate
psaC gene − 114892 115137 246 Locate
ndhE gene − 115388 115693 306 Locate
ndhG gene − 115914 116444 531 Locate
ndhI gene − 116784 117290 507 Locate
ndhA gene − 117371 119501 2131 Locate
ndhH gene − 119503 120714 1212 Locate
rps15 gene − 120784 121056 273 Locate
ycf1 gene − 121459 127062 5604 Locate
trnN-GUU gene + 127280 127351 72 Locate
trnR-ACG gene − 127905 127978 74 Locate
rrn5 gene − 128222 128342 121 Locate
rrn4.5 gene − 128603 128705 103 Locate
rrn23 gene − 128805 131614 2810 Locate
trnA-UGC gene − 131782 132665 884 Locate
trnI-GAU gene − 132730 133748 1019 Locate
rrn16 gene − 134047 135537 1491 Locate
trnV-GAC gene − 135764 135835 72 Locate
rps12 gene + 137429 138218 790 Locate
rps7 gene + 138272 138739 468 Locate
ndhB gene + 139058 141211 2154 Locate
trnL-CAA gene + 141788 141868 81 Locate
ycf2 gene − 142463 149311 6849 Locate
trnI-CAU gene + 149400 149473 74 Locate
rpl23 gene + 149639 149920 282 Locate
rpl2 gene + 149939 151427 1489 Locate
Status Available
Accession PP357155.1
Length 151,531 bp
GC content 38.0%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources