Coordinate-aware organelle record

Elsholtzia rugulosa chloroplast genome

Available NC_050945.1 151,952 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	4	78	74
psbA	gene	photosystem-ii	−	407	1466	1059
trnK-UUU	gene	translation-rna	−	1693	4261	2568
matK	gene	other	−	1966	3526	1560
rps16	gene	ribosomal-protein	−	4787	5917	1130
trnQ-UUG	gene	translation-rna	−	6826	6898	72
psbK	gene	photosystem-ii	+	7285	7471	186
psbI	gene	photosystem-ii	+	7857	7968	111
trnS-GCU	gene	translation-rna	−	8115	8203	88
trnG-UCC	gene	translation-rna	+	8870	9623	753
trnR-UCU	gene	translation-rna	+	9836	9908	72
atpA	gene	atp-synthase	−	10012	11536	1524
atpF	gene	atp-synthase	−	11636	12889	1253
atpH	gene	atp-synthase	−	13161	13407	246
atpI	gene	atp-synthase	−	14429	15173	744
rps2	gene	ribosomal-protein	−	15406	16117	711
rpoC2	gene	rna-polymerase	−	16347	20529	4182
rpoC1	gene	rna-polymerase	−	20693	23498	2805
rpoB	gene	rna-polymerase	−	23524	26737	3213
trnC-GCA	gene	translation-rna	+	27905	27976	71
petN	gene	cytochrome	+	28138	28228	90
psbM	gene	photosystem-ii	−	29237	29342	105
trnD-GUC	gene	translation-rna	−	29711	29785	74
trnY-GUA	gene	translation-rna	−	29895	29979	84
trnT-GGU	gene	translation-rna	+	30663	30735	72
psbD	gene	photosystem-ii	+	31876	32938	1062
psbC	gene	photosystem-ii	+	32885	34307	1422
trnS-UGA	gene	translation-rna	−	34553	34635	82
psbZ	gene	photosystem-ii	+	34977	35166	189
trnG-GCC	gene	translation-rna	+	35434	35505	71
trnfM-CAU	gene	translation-rna	−	35673	35747	74
rps14	gene	ribosomal-protein	−	35891	36194	303
psaB	gene	photosystem-i	−	36316	38521	2205
psaA	gene	photosystem-i	−	38546	40799	2253
ycf3	gene	other	−	41478	43452	1974
trnS-GGA	gene	translation-rna	+	44297	44384	87
rps4	gene	ribosomal-protein	−	44687	45293	606
trnT-UGU	gene	translation-rna	−	45696	45769	73
trnL-UAA	gene	translation-rna	+	46486	47055	569
trnF-GAA	gene	translation-rna	+	47349	47422	73
ndhJ	gene	nad-dehydrogenase	−	48106	48583	477
ndhK	gene	nad-dehydrogenase	−	48694	49372	678
ndhC	gene	nad-dehydrogenase	−	49423	49786	363
trnV-UAC	gene	translation-rna	−	50746	51396	650
trnM-CAU	gene	translation-rna	+	51576	51649	73
atpE	gene	atp-synthase	−	51864	52266	402
atpB	gene	atp-synthase	−	52262	53759	1497
rbcL	gene	other	+	54556	56017	1461
accD	gene	other	+	56683	58165	1482
psaI	gene	photosystem-i	+	58870	58981	111
ycf4	gene	other	+	59439	59994	555
cemA	gene	other	+	60653	61343	690
petA	gene	cytochrome	+	61584	62547	963
psbJ	gene	photosystem-ii	−	63457	63580	123
psbL	gene	photosystem-ii	−	63714	63831	117
psbF	gene	photosystem-ii	−	63854	63974	120
psbE	gene	photosystem-ii	−	63988	64240	252
petL	gene	cytochrome	+	65140	65236	96
petG	gene	cytochrome	+	65411	65525	114
trnW-CCA	gene	translation-rna	−	65651	65725	74
trnP-UGG	gene	translation-rna	−	65893	65967	74
psaJ	gene	photosystem-i	+	66249	66384	135
rpl33	gene	ribosomal-protein	+	66823	67024	201
rps18	gene	ribosomal-protein	+	67192	67498	306
rpl20	gene	ribosomal-protein	−	67731	68118	387
rps12	gene	ribosomal-protein	−	68920	97183	28263
rps12	gene	ribosomal-protein	+	68920	138616	69696
clpP	gene	other	−	69162	71104	1942
psbB	gene	photosystem-ii	+	71561	73088	1527
psbT	gene	photosystem-ii	+	73270	73372	102
psbN	gene	photosystem-ii	−	73437	73569	132
psbH	gene	photosystem-ii	+	73674	73896	222
petB	gene	cytochrome	+	74023	75401	1378
petD	gene	cytochrome	+	75589	76784	1195
rpoA	gene	rna-polymerase	−	76966	77974	1008
rps11	gene	ribosomal-protein	−	78045	78462	417
rpl36	gene	ribosomal-protein	−	78571	78685	114
infA	gene	other	−	78788	79022	234
rps8	gene	ribosomal-protein	−	79148	79553	405
rpl14	gene	ribosomal-protein	−	79726	80095	369
rpl16	gene	ribosomal-protein	−	80227	81505	1278
rps3	gene	ribosomal-protein	−	81647	82310	663
rpl22	gene	ribosomal-protein	−	82294	82762	468
rps19	gene	ribosomal-protein	−	82845	83124	279
rpl2	gene	ribosomal-protein	−	83184	84673	1489
rpl23	gene	ribosomal-protein	−	84691	84973	282
trnI-CAU	gene	translation-rna	−	85138	85212	74
ycf2	gene	other	+	85300	92158	6858
ycf15	gene	other	+	92299	92617	318
trnL-CAA	gene	translation-rna	−	92742	92823	81
ndhB	gene	nad-dehydrogenase	−	93399	95607	2208
rps7	gene	ribosomal-protein	−	95871	96339	468
trnV-GAC	gene	translation-rna	+	98792	98864	72
rrn16	gene	ribosomal-rna	+	99090	100581	1491
trnI-GAU	gene	translation-rna	+	100883	101902	1019
trnA-UGC	gene	translation-rna	+	101966	102850	884
rrn23	gene	ribosomal-rna	+	103009	105820	2811
rrn4.5	gene	ribosomal-rna	+	105918	106021	103
rrn5	gene	ribosomal-rna	+	106281	106402	121
trnR-ACG	gene	translation-rna	+	106645	106719	74
trnN-GUU	gene	translation-rna	−	107279	107351	72
ndhF	gene	nad-dehydrogenase	−	108703	110935	2232
rpl32	gene	ribosomal-protein	+	111324	111495	171
trnL-UAG	gene	translation-rna	+	112183	112263	80
ccsA	gene	other	+	112350	113322	972
ndhD	gene	nad-dehydrogenase	−	113567	115097	1530
psaC	gene	photosystem-i	−	115193	115439	246
ndhE	gene	nad-dehydrogenase	−	115689	115995	306
ndhG	gene	nad-dehydrogenase	−	116221	116752	531
ndhI	gene	nad-dehydrogenase	−	117097	117604	507
ndhA	gene	nad-dehydrogenase	−	117685	119792	2107
ndhH	gene	nad-dehydrogenase	−	119793	121029	1236
rps15	gene	ribosomal-protein	−	121074	121347	273
ycf1	gene	other	−	121785	127440	5655
trnN-GUU	gene	translation-rna	+	127657	127729	72
trnR-ACG	gene	translation-rna	−	128289	128363	74
rrn5	gene	ribosomal-rna	−	128606	128727	121
rrn4.5	gene	ribosomal-rna	−	128987	129090	103
rrn23	gene	ribosomal-rna	−	129188	131999	2811
trnA-UGC	gene	translation-rna	−	132158	133042	884
trnI-GAU	gene	translation-rna	−	133106	134125	1019
rrn16	gene	ribosomal-rna	−	134427	135918	1491
trnV-GAC	gene	translation-rna	−	136144	136216	72
rps7	gene	ribosomal-protein	+	138669	139137	468
ndhB	gene	nad-dehydrogenase	+	139401	141609	2208
trnL-CAA	gene	translation-rna	+	142185	142266	81
ycf15	gene	other	−	142391	142709	318
ycf2	gene	other	−	142850	149708	6858
trnI-CAU	gene	translation-rna	+	149796	149870	74
rpl23	gene	ribosomal-protein	+	150035	150317	282
rpl2	gene	ribosomal-protein	+	150335	151824	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_050945.1DNA · accDNC_050945DNA · atpBNC_050945DNA · matKNC_050945DNA · ndhFNC_050945DNA · psbANC_050945DNA · rbcLNC_050945DNA · rps12NC_050945DNA · ycf1NC_050945