Galeopsis bifida chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_071846.1 · 2–76 bp · −
psbA · NC_071846.1 · 381–1,439 bp · −
trnK-UUU · NC_071846.1 · 1,677–4,265 bp · −
matK · NC_071846.1 · 1,979–3,514 bp · −
rps16 · NC_071846.1 · 5,183–6,346 bp · −
trnQ-UUG · NC_071846.1 · 7,456–7,527 bp · −
trnS-GCU · NC_071846.1 · 8,661–8,748 bp · −
atpA · NC_071846.1 · 10,481–12,004 bp · −
atpF · NC_071846.1 · 12,093–13,320 bp · −
atpH · NC_071846.1 · 13,669–13,914 bp · −
atpI · NC_071846.1 · 14,918–15,661 bp · −
rps2 · NC_071846.1 · 15,892–16,602 bp · −
rpoC2 · NC_071846.1 · 16,817–21,001 bp · −
rpoC1 · NC_071846.1 · 21,156–24,014 bp · −
rpoB · NC_071846.1 · 24,020–27,232 bp · −
psbM · NC_071846.1 · 30,126–30,230 bp · −
trnD-GUC · NC_071846.1 · 30,754–30,827 bp · −
trnY-GUA · NC_071846.1 · 30,943–31,026 bp · −
trnE-UUC · NC_071846.1 · 31,086–31,155 bp · −
trnT-GGU · NC_071846.1 · 31,737–31,809 bp · −
trnS-UGA · NC_071846.1 · 35,717–35,809 bp · −
trnfM-CAU · NC_071846.1 · 36,769–36,842 bp · −
rps14 · NC_071846.1 · 36,992–37,294 bp · −
psaB · NC_071846.1 · 37,422–39,626 bp · −
psaA · NC_071846.1 · 39,652–41,904 bp · −
ycf3 · NC_071846.1 · 42,630–44,585 bp · −
rps4 · NC_071846.1 · 45,281–45,886 bp · −
trnT-UGU · NC_071846.1 · 46,280–46,352 bp · −
ndhJ · NC_071846.1 · 48,627–49,103 bp · −
ndhK · NC_071846.1 · 49,204–49,881 bp · −
ndhC · NC_071846.1 · 49,935–50,297 bp · −
trnV-UAC · NC_071846.1 · 51,239–51,886 bp · −
atpE · NC_071846.1 · 52,339–52,740 bp · −
atpB · NC_071846.1 · 52,737–54,233 bp · −
psbJ · NC_071846.1 · 63,601–63,723 bp · −
psbL · NC_071846.1 · 63,861–63,977 bp · −
psbF · NC_071846.1 · 64,001–64,120 bp · −
psbE · NC_071846.1 · 64,135–64,386 bp · −
trnW-CCA · NC_071846.1 · 65,591–65,664 bp · −
trnP-UGG · NC_071846.1 · 65,833–65,906 bp · −
rpl20 · NC_071846.1 · 67,643–68,029 bp · −
rps12 · NC_071846.1 · 68,801–68,914 bp · −
rps12 · NC_071846.1 · 96,159–96,952 bp · −
clpP · NC_071846.1 · 69,040–70,919 bp · −
psbN · NC_071846.1 · 73,245–73,376 bp · −
rpoA · NC_071846.1 · 76,796–77,809 bp · −
rps11 · NC_071846.1 · 77,881–78,297 bp · −
rpl36 · NC_071846.1 · 78,400–78,513 bp · −
infA · NC_071846.1 · 78,609–78,842 bp · −
rps8 · NC_071846.1 · 78,971–79,384 bp · −
rpl14 · NC_071846.1 · 79,562–79,930 bp · −
rpl16 · NC_071846.1 · 80,057–81,368 bp · −
rps3 · NC_071846.1 · 81,515–82,177 bp · −
rpl22 · NC_071846.1 · 82,162–82,617 bp · −
rps19 · NC_071846.1 · 82,681–82,959 bp · −
rpl2 · NC_071846.1 · 83,011–84,502 bp · −
rpl23 · NC_071846.1 · 84,521–84,802 bp · −
trnI-CAU · NC_071846.1 · 84,968–85,041 bp · −
trnL-CAA · NC_071846.1 · 92,527–92,607 bp · −
ndhB · NC_071846.1 · 93,152–95,363 bp · −
rps7 · NC_071846.1 · 95,638–96,105 bp · −
trnN-GUU · NC_071846.1 · 107,051–107,122 bp · −
ndhF · NC_071846.1 · 108,512–110,740 bp · −
ndhD · NC_071846.1 · 113,470–114,990 bp · −
psaC · NC_071846.1 · 115,086–115,331 bp · −
ndhE · NC_071846.1 · 115,581–115,886 bp · −
ndhG · NC_071846.1 · 116,096–116,626 bp · −
ndhI · NC_071846.1 · 116,992–117,498 bp · −
ndhA · NC_071846.1 · 117,578–119,721 bp · −
ndhH · NC_071846.1 · 119,723–120,904 bp · −
rps15 · NC_071846.1 · 121,005–121,277 bp · −
ycf1 · NC_071846.1 · 121,707–127,304 bp · −
trnR-ACG · NC_071846.1 · 128,268–128,340 bp · −
rrn5 · NC_071846.1 · 128,575–128,695 bp · −
rrn4.5 · NC_071846.1 · 128,951–129,053 bp · −
rrn23 · NC_071846.1 · 129,152–131,962 bp · −
trnA-UGC · NC_071846.1 · 132,154–133,032 bp · −
trnI-GAU · NC_071846.1 · 133,097–134,105 bp · −
rrn16 · NC_071846.1 · 134,395–135,885 bp · −
trnV-GAC · NC_071846.1 · 136,112–136,183 bp · −
ycf15 · NC_071846.1 · 142,486–142,734 bp · −
ycf2 · NC_071846.1 · 142,777–149,622 bp · −
psbK · NC_071846.1 · 7,864–8,049 bp · +
psbI · NC_071846.1 · 8,427–8,537 bp · +
trnG-UCC · NC_071846.1 · 9,376–10,136 bp · +
trnR-UCU · NC_071846.1 · 10,310–10,384 bp · +
trnC-GCA · NC_071846.1 · 28,352–28,427 bp · +
petN · NC_071846.1 · 29,260–29,349 bp · +
psbD · NC_071846.1 · 33,042–34,103 bp · +
psbC · NC_071846.1 · 34,051–35,472 bp · +
psbZ · NC_071846.1 · 36,134–36,322 bp · +
trnG-GCC · NC_071846.1 · 36,552–36,622 bp · +
trnS-GGA · NC_071846.1 · 44,911–44,997 bp · +
trnL-UAA · NC_071846.1 · 47,029–47,601 bp · +
trnF-GAA · NC_071846.1 · 47,894–47,966 bp · +
trnM-CAU · NC_071846.1 · 52,067–52,139 bp · +
rbcL · NC_071846.1 · 55,027–56,472 bp · +
accD · NC_071846.1 · 57,170–58,636 bp · +
psaI · NC_071846.1 · 59,326–59,436 bp · +
ycf4 · NC_071846.1 · 59,753–60,307 bp · +
cemA · NC_071846.1 · 60,690–61,379 bp · +
petA · NC_071846.1 · 61,596–62,558 bp · +
petL · NC_071846.1 · 65,082–65,177 bp · +
petG · NC_071846.1 · 65,352–65,465 bp · +
psaJ · NC_071846.1 · 66,180–66,314 bp · +
rpl33 · NC_071846.1 · 66,771–66,971 bp · +
rps18 · NC_071846.1 · 67,119–67,424 bp · +
rps12 · NC_071846.1 · 137,800–138,593 bp · +
psbB · NC_071846.1 · 71,359–72,885 bp · +
psbT · NC_071846.1 · 73,077–73,184 bp · +
psbH · NC_071846.1 · 73,480–73,701 bp · +
petB · NC_071846.1 · 73,826–75,218 bp · +
petD · NC_071846.1 · 75,413–76,633 bp · +
ycf2 · NC_071846.1 · 85,130–91,975 bp · +
ycf15 · NC_071846.1 · 92,018–92,266 bp · +
trnV-GAC · NC_071846.1 · 98,569–98,640 bp · +
rrn16 · NC_071846.1 · 98,867–100,357 bp · +
trnI-GAU · NC_071846.1 · 100,647–101,655 bp · +
trnA-UGC · NC_071846.1 · 101,720–102,598 bp · +
rrn23 · NC_071846.1 · 102,790–105,600 bp · +
rrn4.5 · NC_071846.1 · 105,699–105,801 bp · +
rrn5 · NC_071846.1 · 106,057–106,177 bp · +
trnR-ACG · NC_071846.1 · 106,412–106,484 bp · +
ycf1 · NC_071846.1 · 107,448–108,566 bp · +
rpl32 · NC_071846.1 · 111,234–111,410 bp · +
trnL-UAG · NC_071846.1 · 112,150–112,229 bp · +
ccsA · NC_071846.1 · 112,318–113,289 bp · +
trnN-GUU · NC_071846.1 · 127,630–127,701 bp · +
rps7 · NC_071846.1 · 138,647–139,114 bp · +
ndhB · NC_071846.1 · 139,389–141,600 bp · +
trnL-CAA · NC_071846.1 · 142,145–142,225 bp · +
trnI-CAU · NC_071846.1 · 149,711–149,784 bp · +
rpl23 · NC_071846.1 · 149,950–150,231 bp · +
rpl2 · NC_071846.1 · 150,250–151,741 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Galeopsis bifida
ANNOTATED PLASTOME
NC_071846.1
151,834 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37958 75917 113876 151834 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnT-GGU trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 381 1439 1059 Locate
trnK-UUU gene − 1677 4265 2589 Locate
matK gene − 1979 3514 1536 Locate
rps16 gene − 5183 6346 1164 Locate
trnQ-UUG gene − 7456 7527 72 Locate
psbK gene + 7864 8049 186 Locate
psbI gene + 8427 8537 111 Locate
trnS-GCU gene − 8661 8748 88 Locate
trnG-UCC gene + 9376 10136 761 Locate
trnR-UCU gene + 10310 10384 75 Locate
atpA gene − 10481 12004 1524 Locate
atpF gene − 12093 13320 1228 Locate
atpH gene − 13669 13914 246 Locate
atpI gene − 14918 15661 744 Locate
rps2 gene − 15892 16602 711 Locate
rpoC2 gene − 16817 21001 4185 Locate
rpoC1 gene − 21156 24014 2859 Locate
rpoB gene − 24020 27232 3213 Locate
trnC-GCA gene + 28352 28427 76 Locate
petN gene + 29260 29349 90 Locate
psbM gene − 30126 30230 105 Locate
trnD-GUC gene − 30754 30827 74 Locate
trnY-GUA gene − 30943 31026 84 Locate
trnE-UUC gene − 31086 31155 70 Locate
trnT-GGU gene − 31737 31809 73 Locate
psbD gene + 33042 34103 1062 Locate
psbC gene + 34051 35472 1422 Locate
trnS-UGA gene − 35717 35809 93 Locate
psbZ gene + 36134 36322 189 Locate
trnG-GCC gene + 36552 36622 71 Locate
trnfM-CAU gene − 36769 36842 74 Locate
rps14 gene − 36992 37294 303 Locate
psaB gene − 37422 39626 2205 Locate
psaA gene − 39652 41904 2253 Locate
ycf3 gene − 42630 44585 1956 Locate
trnS-GGA gene + 44911 44997 87 Locate
rps4 gene − 45281 45886 606 Locate
trnT-UGU gene − 46280 46352 73 Locate
trnL-UAA gene + 47029 47601 573 Locate
trnF-GAA gene + 47894 47966 73 Locate
ndhJ gene − 48627 49103 477 Locate
ndhK gene − 49204 49881 678 Locate
ndhC gene − 49935 50297 363 Locate
trnV-UAC gene − 51239 51886 648 Locate
trnM-CAU gene + 52067 52139 73 Locate
atpE gene − 52339 52740 402 Locate
atpB gene − 52737 54233 1497 Locate
rbcL gene + 55027 56472 1446 Locate
accD gene + 57170 58636 1467 Locate
psaI gene + 59326 59436 111 Locate
ycf4 gene + 59753 60307 555 Locate
cemA gene + 60690 61379 690 Locate
petA gene + 61596 62558 963 Locate
psbJ gene − 63601 63723 123 Locate
psbL gene − 63861 63977 117 Locate
psbF gene − 64001 64120 120 Locate
psbE gene − 64135 64386 252 Locate
petL gene + 65082 65177 96 Locate
petG gene + 65352 65465 114 Locate
trnW-CCA gene − 65591 65664 74 Locate
trnP-UGG gene − 65833 65906 74 Locate
psaJ gene + 66180 66314 135 Locate
rpl33 gene + 66771 66971 201 Locate
rps18 gene + 67119 67424 306 Locate
rpl20 gene − 67643 68029 387 Locate
rps12 gene − 68801 68914 114 Locate
clpP gene − 69040 70919 1880 Locate
psbB gene + 71359 72885 1527 Locate
psbT gene + 73077 73184 108 Locate
psbN gene − 73245 73376 132 Locate
psbH gene + 73480 73701 222 Locate
petB gene + 73826 75218 1393 Locate
petD gene + 75413 76633 1221 Locate
rpoA gene − 76796 77809 1014 Locate
rps11 gene − 77881 78297 417 Locate
rpl36 gene − 78400 78513 114 Locate
infA gene − 78609 78842 234 Locate
rps8 gene − 78971 79384 414 Locate
rpl14 gene − 79562 79930 369 Locate
rpl16 gene − 80057 81368 1312 Locate
rps3 gene − 81515 82177 663 Locate
rpl22 gene − 82162 82617 456 Locate
rps19 gene − 82681 82959 279 Locate
rpl2 gene − 83011 84502 1492 Locate
rpl23 gene − 84521 84802 282 Locate
trnI-CAU gene − 84968 85041 74 Locate
ycf2 gene + 85130 91975 6846 Locate
ycf15 gene + 92018 92266 249 Locate
trnL-CAA gene − 92527 92607 81 Locate
ndhB gene − 93152 95363 2212 Locate
rps7 gene − 95638 96105 468 Locate
rps12 gene − 96159 96952 794 Locate
trnV-GAC gene + 98569 98640 72 Locate
rrn16 gene + 98867 100357 1491 Locate
trnI-GAU gene + 100647 101655 1009 Locate
trnA-UGC gene + 101720 102598 879 Locate
rrn23 gene + 102790 105600 2811 Locate
rrn4.5 gene + 105699 105801 103 Locate
rrn5 gene + 106057 106177 121 Locate
trnR-ACG gene + 106412 106484 73 Locate
trnN-GUU gene − 107051 107122 72 Locate
ycf1 gene + 107448 108566 1119 Locate
ndhF gene − 108512 110740 2229 Locate
rpl32 gene + 111234 111410 177 Locate
trnL-UAG gene + 112150 112229 80 Locate
ccsA gene + 112318 113289 972 Locate
ndhD gene − 113470 114990 1521 Locate
psaC gene − 115086 115331 246 Locate
ndhE gene − 115581 115886 306 Locate
ndhG gene − 116096 116626 531 Locate
ndhI gene − 116992 117498 507 Locate
ndhA gene − 117578 119721 2144 Locate
ndhH gene − 119723 120904 1182 Locate
rps15 gene − 121005 121277 273 Locate
ycf1 gene − 121707 127304 5598 Locate
trnN-GUU gene + 127630 127701 72 Locate
trnR-ACG gene − 128268 128340 73 Locate
rrn5 gene − 128575 128695 121 Locate
rrn4.5 gene − 128951 129053 103 Locate
rrn23 gene − 129152 131962 2811 Locate
trnA-UGC gene − 132154 133032 879 Locate
trnI-GAU gene − 133097 134105 1009 Locate
rrn16 gene − 134395 135885 1491 Locate
trnV-GAC gene − 136112 136183 72 Locate
rps12 gene + 137800 138593 794 Locate
rps7 gene + 138647 139114 468 Locate
ndhB gene + 139389 141600 2212 Locate
trnL-CAA gene + 142145 142225 81 Locate
ycf15 gene − 142486 142734 249 Locate
ycf2 gene − 142777 149622 6846 Locate
trnI-CAU gene + 149711 149784 74 Locate
rpl23 gene + 149950 150231 282 Locate
rpl2 gene + 150250 151741 1492 Locate
Status Available
Accession NC_071846.1
Length 151,834 bp
GC content 38.5%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources