Coordinate-aware organelle record

Gmelina hainanensis chloroplast genome

Available NC_053620.1 154,065 bp 131 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 5-78 bp · − strandpsbA · gene · 418-1,476 bp · − strandtrnK-UUU · gene · 1,709-4,289 bp · − strandmatK · gene · 2,015-3,550 bp · − strandrps16 · gene · 5,193-6,334 bp · − strandtrnQ-UUG · gene · 7,508-7,579 bp · − strandpsbK · gene · 7,900-8,094 bp · + strandpsbI · gene · 8,483-8,593 bp · + strandtrnS-GCU · gene · 8,725-8,812 bp · − strandtrnG-UCC · gene · 10,191-10,324 bp · + strandtrnR-UCU · gene · 10,505-10,576 bp · + strandatpA · gene · 10,703-12,226 bp · − strandatpF · gene · 12,332-13,594 bp · − strandatpH · gene · 14,013-14,258 bp · − strandatpI · gene · 15,268-16,011 bp · − strandrps2 · gene · 16,242-16,952 bp · − strandrpoC2 · gene · 17,178-21,527 bp · − strandrpoC1 · gene · 21,508-24,391 bp · − strandrpoB · gene · 24,418-27,630 bp · − strandtrnC-GCA · gene · 28,782-28,852 bp · + strandpetN · gene · 29,684-29,773 bp · + strandpsbM · gene · 30,758-30,862 bp · − strandtrnD-GUC · gene · 31,384-31,457 bp · − strandtrnY-GUA · gene · 31,566-31,649 bp · − strandtrnE-UUC · gene · 31,709-31,781 bp · − strandtrnT-GGU · gene · 32,389-32,460 bp · + strandpsbD · gene · 33,846-34,907 bp · + strandpsbC · gene · 34,855-36,276 bp · + strandtrnS-UGA · gene · 36,524-36,616 bp · − strandpsbZ · gene · 36,861-37,142 bp · + strandtrnG-GCC · gene · 37,429-37,499 bp · + strandtrnfM-CAU · gene · 37,667-37,740 bp · − strandrps14 · gene · 37,890-38,192 bp · − strandpsaB · gene · 38,315-40,519 bp · − strandpsaA · gene · 40,545-42,797 bp · − strandycf3 · gene · 43,504-45,449 bp · − strandtrnS-GGA · gene · 46,316-46,402 bp · + strandrps4 · gene · 46,686-47,291 bp · − strandtrnT-UGU · gene · 47,621-47,693 bp · − strandtrnL-UAA · gene · 48,427-48,998 bp · + strandtrnF-GAA · gene · 49,304-49,376 bp · + strandndhJ · gene · 50,040-50,516 bp · − strandndhK · gene · 50,618-51,295 bp · − strandndhC · gene · 51,348-51,710 bp · − strandtrnV-UAC · gene · 52,712-53,363 bp · − strandtrnM-CAU · gene · 53,544-53,616 bp · + strandatpE · gene · 53,833-54,234 bp · − strandatpB · gene · 54,231-55,727 bp · − strandrbcL · gene · 56,473-57,936 bp · + strandaccD · gene · 58,593-60,125 bp · + strandpsaI · gene · 60,851-60,961 bp · + strandycf4 · gene · 61,404-61,958 bp · + strandcemA · gene · 62,599-63,288 bp · + strandpetA · gene · 63,511-64,473 bp · + strandpsbJ · gene · 65,414-65,536 bp · − strandpsbL · gene · 65,670-65,891 bp · − strandpsbF · gene · 65,810-65,929 bp · − strandpsbE · gene · 65,944-66,195 bp · − strandpetL · gene · 67,124-67,219 bp · + strandpetG · gene · 67,394-67,507 bp · + strandtrnW-CCA · gene · 67,630-67,703 bp · − strandtrnP-GGG · gene · 67,867-67,940 bp · − strandpsaJ · gene · 68,218-68,352 bp · + strandrpl33 · gene · 68,835-69,035 bp · + strandrps18 · gene · 69,153-69,509 bp · + strandrpl20 · gene · 69,752-70,138 bp · − strandrps12 · gene · 70,937-99,176 bp · − strandrps12 · gene · 70,937-140,802 bp · + strandclpP · gene · 71,192-73,127 bp · − strandpsbB · gene · 73,573-75,099 bp · + strandpsbT · gene · 75,291-75,398 bp · + strandpsbN · gene · 75,471-75,602 bp · − strandpsbH · gene · 75,708-75,929 bp · + strandpetB · gene · 76,043-77,401 bp · + strandpetD · gene · 77,591-78,805 bp · + strandrpoA · gene · 78,992-79,996 bp · − strandrps11 · gene · 80,068-80,484 bp · − strandrpl36 · gene · 80,586-80,699 bp · − strandinfA · gene · 80,795-81,028 bp · − strandrps8 · gene · 81,153-81,557 bp · − strandrpl14 · gene · 81,747-82,115 bp · − strandrpl16 · gene · 82,271-83,555 bp · − strandrps3 · gene · 83,697-84,359 bp · − strandrpl22 · gene · 84,344-84,817 bp · − strandrps19 · gene · 84,884-85,162 bp · − strandrpl2 · gene · 85,225-86,716 bp · − strandrpl23 · gene · 86,740-87,021 bp · − strandtrnI-CAU · gene · 87,187-87,260 bp · − strandycf2 · gene · 87,349-94,158 bp · + strandtrnL-CAA · gene · 94,758-94,838 bp · − strandndhB · gene · 95,377-97,587 bp · − strandrps7 · gene · 97,862-98,329 bp · − strandtrnV-GAC · gene · 100,786-100,857 bp · + strandrrn16 · gene · 101,087-102,577 bp · + strandtrnI-GAU · gene · 102,867-103,884 bp · + strandtrnA-UGC · gene · 103,949-104,828 bp · + strandrrn23 · gene · 105,016-107,824 bp · + strandrrn4.5 · gene · 107,925-108,027 bp · + strandrrn5 · gene · 108,283-108,403 bp · + strandtrnR-ACG · gene · 108,645-108,718 bp · + strandtrnN-GUU · gene · 109,273-109,344 bp · − strandycf1 · gene · 109,676-110,851 bp · + strandndhF · gene · 110,724-112,991 bp · − strandrpl32 · gene · 113,542-113,718 bp · + strandtrnL-UAG · gene · 114,489-114,568 bp · + strandccsA · gene · 114,653-115,630 bp · + strandndhD · gene · 115,868-117,403 bp · − strandpsaC · gene · 117,490-117,735 bp · − strandndhE · gene · 117,991-118,296 bp · − strandndhG · gene · 118,516-119,046 bp · − strandndhI · gene · 119,380-119,886 bp · − strandndhA · gene · 119,968-122,161 bp · − strandndhH · gene · 122,163-123,344 bp · − strandrps15 · gene · 123,440-123,712 bp · − strandycf1 · gene · 124,080-129,506 bp · − strandtrnN-GUU · gene · 129,841-129,912 bp · + strandtrnR-ACG · gene · 130,467-130,540 bp · − strandrrn5 · gene · 130,782-130,902 bp · − strandrrn4.5 · gene · 131,158-131,260 bp · − strandrrn23 · gene · 131,361-134,169 bp · − strandtrnA-UGC · gene · 134,357-135,236 bp · − strandtrnI-GAU · gene · 135,301-136,318 bp · − strandrrn16 · gene · 136,608-138,098 bp · − strandtrnV-GAC · gene · 138,328-138,399 bp · − strandrps7 · gene · 140,856-141,323 bp · + strandndhB · gene · 141,598-143,808 bp · + strandtrnL-CAA · gene · 144,347-144,427 bp · + strandycf2 · gene · 145,027-151,836 bp · − strandtrnI-CAU · gene · 151,925-151,998 bp · + strandrpl23 · gene · 152,164-152,445 bp · + strandrpl2 · gene · 152,469-153,960 bp · + strandGmelina hainanensisANNOTATED PLASTOMENC_053620.1154,065 bp · 131 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_053620.1Features: 131 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−47874
psbAgenephotosystem-ii−41714761059
trnK-UUUgenetranslation-rna−170842892581
matKgeneother−201435501536
rps16generibosomal-protein−519263341142
trnQ-UUGgenetranslation-rna−7507757972
psbKgenephotosystem-ii+78998094195
psbIgenephotosystem-ii+84828593111
trnS-GCUgenetranslation-rna−8724881288
trnG-UCCgenetranslation-rna+1019010324134
trnR-UCUgenetranslation-rna+105041057672
atpAgeneatp-synthase−10702122261524
atpFgeneatp-synthase−12331135941263
atpHgeneatp-synthase−1401214258246
atpIgeneatp-synthase−1526716011744
rps2generibosomal-protein−1624116952711
rpoC2generna-polymerase−17177215274350
rpoC1generna-polymerase−21507243912884
rpoBgenerna-polymerase−24417276303213
trnC-GCAgenetranslation-rna+287812885271
petNgenecytochrome+296832977390
psbMgenephotosystem-ii−3075730862105
trnD-GUCgenetranslation-rna−313833145774
trnY-GUAgenetranslation-rna−315653164984
trnE-UUCgenetranslation-rna−317083178173
trnT-GGUgenetranslation-rna+323883246072
psbDgenephotosystem-ii+33845349071062
psbCgenephotosystem-ii+34854362761422
trnS-UGAgenetranslation-rna−365233661693
psbZgenephotosystem-ii+3686037142282
trnG-GCCgenetranslation-rna+374283749971
trnfM-CAUgenetranslation-rna−376663774074
rps14generibosomal-protein−3788938192303
psaBgenephotosystem-i−38314405192205
psaAgenephotosystem-i−40544427972253
ycf3geneother−43503454491946
trnS-GGAgenetranslation-rna+463154640287
rps4generibosomal-protein−4668547291606
trnT-UGUgenetranslation-rna−476204769373
trnL-UAAgenetranslation-rna+4842648998572
trnF-GAAgenetranslation-rna+493034937673
ndhJgenenad-dehydrogenase−5003950516477
ndhKgenenad-dehydrogenase−5061751295678
ndhCgenenad-dehydrogenase−5134751710363
trnV-UACgenetranslation-rna−5271153363652
trnM-CAUgenetranslation-rna+535435361673
atpEgeneatp-synthase−5383254234402
atpBgeneatp-synthase−54230557271497
rbcLgeneother+56472579361464
accDgeneother+58592601251533
psaIgenephotosystem-i+6085060961111
ycf4geneother+6140361958555
cemAgeneother+6259863288690
petAgenecytochrome+6351064473963
psbJgenephotosystem-ii−6541365536123
psbLgenephotosystem-ii−6566965891222
psbFgenephotosystem-ii−6580965929120
psbEgenephotosystem-ii−6594366195252
petLgenecytochrome+671236721996
petGgenecytochrome+6739367507114
trnW-CCAgenetranslation-rna−676296770374
trnP-GGGgenetranslation-rna−678666794074
psaJgenephotosystem-i+6821768352135
rpl33generibosomal-protein+6883469035201
rps18generibosomal-protein+6915269509357
rpl20generibosomal-protein−6975170138387
rps12generibosomal-protein−709369917628240
rps12generibosomal-protein+7093614080269866
clpPgeneother−71191731271936
psbBgenephotosystem-ii+73572750991527
psbTgenephotosystem-ii+7529075398108
psbNgenephotosystem-ii−7547075602132
psbHgenephotosystem-ii+7570775929222
petBgenecytochrome+76042774011359
petDgenecytochrome+77590788051215
rpoAgenerna-polymerase−78991799961005
rps11generibosomal-protein−8006780484417
rpl36generibosomal-protein−8058580699114
infAgeneother−8079481028234
rps8generibosomal-protein−8115281557405
rpl14generibosomal-protein−8174682115369
rpl16generibosomal-protein−82270835551285
rps3generibosomal-protein−8369684359663
rpl22generibosomal-protein−8434384817474
rps19generibosomal-protein−8488385162279
rpl2generibosomal-protein−85224867161492
rpl23generibosomal-protein−8673987021282
trnI-CAUgenetranslation-rna−871868726074
ycf2geneother+87348941586810
trnL-CAAgenetranslation-rna−947579483881
ndhBgenenad-dehydrogenase−95376975872211
rps7generibosomal-protein−9786198329468
trnV-GACgenetranslation-rna+10078510085772
rrn16generibosomal-rna+1010861025771491
trnI-GAUgenetranslation-rna+1028661038841018
trnA-UGCgenetranslation-rna+103948104828880
rrn23generibosomal-rna+1050151078242809
rrn4.5generibosomal-rna+107924108027103
rrn5generibosomal-rna+108282108403121
trnR-ACGgenetranslation-rna+10864410871874
trnN-GUUgenetranslation-rna−10927210934472
ycf1geneother+1096751108511176
ndhFgenenad-dehydrogenase−1107231129912268
rpl32generibosomal-protein+113541113718177
trnL-UAGgenetranslation-rna+11448811456880
ccsAgeneother+114652115630978
ndhDgenenad-dehydrogenase−1158671174031536
psaCgenephotosystem-i−117489117735246
ndhEgenenad-dehydrogenase−117990118296306
ndhGgenenad-dehydrogenase−118515119046531
ndhIgenenad-dehydrogenase−119379119886507
ndhAgenenad-dehydrogenase−1199671221612194
ndhHgenenad-dehydrogenase−1221621233441182
rps15generibosomal-protein−123439123712273
ycf1geneother−1240791295065427
trnN-GUUgenetranslation-rna+12984012991272
trnR-ACGgenetranslation-rna−13046613054074
rrn5generibosomal-rna−130781130902121
rrn4.5generibosomal-rna−131157131260103
rrn23generibosomal-rna−1313601341692809
trnA-UGCgenetranslation-rna−134356135236880
trnI-GAUgenetranslation-rna−1353001363181018
rrn16generibosomal-rna−1366071380981491
trnV-GACgenetranslation-rna−13832713839972
rps7generibosomal-protein+140855141323468
ndhBgenenad-dehydrogenase+1415971438082211
trnL-CAAgenetranslation-rna+14434614442781
ycf2geneother−1450261518366810
trnI-CAUgenetranslation-rna+15192415199874
rpl23generibosomal-protein+152163152445282
rpl2generibosomal-protein+1524681539601492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources