Coordinate-aware organelle record

Haplostachys haplostachya chloroplast genome

Available NC_029819.1 150,130 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	75	75
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1697	4277	2580
matK	gene	other	−	1996	3526	1530
rps16	gene	ribosomal-protein	−	4920	6061	1141
trnQ-UUG	gene	translation-rna	−	6889	6961	72
psbK	gene	photosystem-ii	+	7297	7483	186
psbI	gene	photosystem-ii	+	7857	7968	111
trnS-GCU	gene	translation-rna	−	8089	8177	88
trnG-UCC	gene	translation-rna	+	8871	9631	760
trnR-UCU	gene	translation-rna	+	9791	9863	72
atpA	gene	atp-synthase	−	9959	11483	1524
atpF	gene	atp-synthase	−	11570	12780	1210
atpH	gene	atp-synthase	−	13145	13391	246
atpI	gene	atp-synthase	−	14366	15110	744
rps2	gene	ribosomal-protein	−	15340	16051	711
rpoC2	gene	rna-polymerase	−	16388	20471	4083
rpoC1	gene	rna-polymerase	−	20625	23462	2837
rpoB	gene	rna-polymerase	−	23488	26701	3213
trnC-GCA	gene	translation-rna	+	27805	27876	71
petN	gene	cytochrome	+	28711	28801	90
psbM	gene	photosystem-ii	−	29303	29408	105
trnD-GUC	gene	translation-rna	−	29926	30000	74
trnY-GUA	gene	translation-rna	−	30115	30199	84
trnE-UUC	gene	translation-rna	−	30258	30331	73
trnT-GGU	gene	translation-rna	+	30901	30973	72
psbD	gene	photosystem-ii	+	32048	33110	1062
psbC	gene	photosystem-ii	+	33057	34479	1422
trnS-UGA	gene	translation-rna	−	34711	34804	93
psbZ	gene	photosystem-ii	+	35133	35322	189
trnG-GCC	gene	translation-rna	+	35546	35617	71
trnfM-CAU	gene	translation-rna	−	35766	35840	74
rps14	gene	ribosomal-protein	−	35989	36292	303
psaB	gene	photosystem-i	−	36427	38632	2205
psaA	gene	photosystem-i	−	38657	40910	2253
ycf3	gene	other	−	41640	43582	1942
trnS-GGA	gene	translation-rna	+	43898	43985	87
rps4	gene	ribosomal-protein	−	44147	44753	606
trnT-UGU	gene	translation-rna	−	45138	45211	73
trnL-UAA	gene	translation-rna	+	45901	46475	574
trnF-GAA	gene	translation-rna	+	46770	46843	73
ndhJ	gene	nad-dehydrogenase	−	47501	47978	477
ndhK	gene	nad-dehydrogenase	−	48078	48756	678
ndhC	gene	nad-dehydrogenase	−	48809	49172	363
trnV-UAC	gene	translation-rna	−	50116	50769	653
trnM-CAU	gene	translation-rna	+	50957	51030	73
atpE	gene	atp-synthase	−	51243	51645	402
atpB	gene	atp-synthase	−	51641	53138	1497
rbcL	gene	other	+	53939	55385	1446
accD	gene	other	+	56093	57560	1467
psaI	gene	photosystem-i	+	57957	58068	111
ycf4	gene	other	+	58502	59057	555
cemA	gene	other	+	59363	60053	690
petA	gene	cytochrome	+	60270	61233	963
psbJ	gene	photosystem-ii	−	62282	62405	123
psbL	gene	photosystem-ii	−	62542	62659	117
psbF	gene	photosystem-ii	−	62682	62802	120
psbE	gene	photosystem-ii	−	62816	63068	252
petL	gene	cytochrome	+	63983	64079	96
petG	gene	cytochrome	+	64253	64367	114
trnW-CCA	gene	translation-rna	−	64492	64566	74
trnP-UGG	gene	translation-rna	−	64730	64804	74
psaJ	gene	photosystem-i	+	65074	65209	135
rpl33	gene	ribosomal-protein	+	65688	65889	201
rps18	gene	ribosomal-protein	+	66035	66341	306
rpl20	gene	ribosomal-protein	−	66557	66944	387
rps12	gene	ribosomal-protein	−	67683	95784	28101
rps12	gene	ribosomal-protein	+	67683	136891	69208
clpP	gene	other	−	67922	69785	1863
psbB	gene	photosystem-ii	+	70222	71749	1527
psbT	gene	photosystem-ii	+	71933	72044	111
psbN	gene	photosystem-ii	−	72117	72249	132
psbH	gene	photosystem-ii	+	72352	72574	222
petB	gene	cytochrome	+	72698	74072	1374
petD	gene	cytochrome	+	74266	75476	1210
rpoA	gene	rna-polymerase	−	75638	76652	1014
rps11	gene	ribosomal-protein	−	76730	77147	417
rpl36	gene	ribosomal-protein	−	77249	77363	114
infA	gene	other	−	77458	77692	234
rps8	gene	ribosomal-protein	−	77815	78229	414
rpl14	gene	ribosomal-protein	−	78402	78771	369
rpl16	gene	ribosomal-protein	−	78897	80199	1302
rps3	gene	ribosomal-protein	−	80340	81003	663
rpl22	gene	ribosomal-protein	−	80987	81452	465
rps19	gene	ribosomal-protein	−	81515	81794	279
rpl2	gene	ribosomal-protein	−	81845	83327	1482
rpl23	gene	ribosomal-protein	−	83345	83627	282
trnI-CAU	gene	translation-rna	−	83800	83874	74
ycf2	gene	other	+	83962	90811	6849
ycf15	gene	other	+	90853	91102	249
trnL-CAA	gene	translation-rna	−	91362	91443	81
ndhB	gene	nad-dehydrogenase	−	91988	94200	2212
rps7	gene	ribosomal-protein	−	94469	94937	468
trnV-GAC	gene	translation-rna	+	97237	97309	72
A4319_pgr008	gene	other	+	97536	99029	1493
trnI-GAU	gene	translation-rna	+	99320	100329	1009
trnA-UGC	gene	translation-rna	+	100393	101272	879
A4319_pgr007	gene	other	+	101471	104282	2811
A4319_pgr006	gene	other	+	104380	104483	103
A4319_pgr005	gene	other	+	104707	104828	121
trnR-ACG	gene	translation-rna	+	105062	105136	74
trnN-GUU	gene	translation-rna	−	105703	105775	72
ycf1	gene	other	+	106100	107159	1059
ndhF	gene	nad-dehydrogenase	−	107164	109393	2229
rpl32	gene	ribosomal-protein	+	109828	110005	177
trnL-UAG	gene	translation-rna	+	110741	110821	80
ccsA	gene	other	+	110901	111873	972
ndhD	gene	nad-dehydrogenase	−	112053	113574	1521
psaC	gene	photosystem-i	−	113677	113923	246
ndhE	gene	nad-dehydrogenase	−	114174	114480	306
ndhG	gene	nad-dehydrogenase	−	114689	115220	531
ndhI	gene	nad-dehydrogenase	−	115595	116102	507
ndhA	gene	nad-dehydrogenase	−	116181	118292	2111
ndhH	gene	nad-dehydrogenase	−	118293	119475	1182
rps15	gene	ribosomal-protein	−	119575	119848	273
ycf1	gene	other	−	120237	125781	5544
trnN-GUU	gene	translation-rna	+	126106	126178	72
trnR-ACG	gene	translation-rna	−	126745	126819	74
A4319_pgr004	gene	other	−	127053	127174	121
A4319_pgr003	gene	other	−	127398	127501	103
A4319_pgr002	gene	other	−	127599	130410	2811
trnA-UGC	gene	translation-rna	−	130609	131488	879
trnI-GAU	gene	translation-rna	−	131552	132561	1009
A4319_pgr001	gene	other	−	132854	134345	1491
trnV-GAC	gene	translation-rna	−	134572	134644	72
rps7	gene	ribosomal-protein	+	136944	137412	468
ndhB	gene	nad-dehydrogenase	+	137681	139893	2212
trnL-CAA	gene	translation-rna	+	140438	140519	81
ycf15	gene	other	−	140779	141028	249
ycf2	gene	other	−	141070	147919	6849
trnI-CAU	gene	translation-rna	+	148007	148081	74
rpl23	gene	ribosomal-protein	+	148254	148536	282
rpl2	gene	ribosomal-protein	+	148554	150036	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_029819.1DNA · accDNC_029819DNA · atpBNC_029819DNA · matKNC_029819DNA · ndhFNC_029819DNA · psbANC_029819DNA · rbcLNC_029819DNA · rps12NC_029819DNA · ycf1NC_029819