Isodon adenanthus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067642.1 · 11–85 bp · −
psbA · NC_067642.1 · 393–1,451 bp · −
trnK-UUU · NC_067642.1 · 1,683–4,263 bp · −
matK · NC_067642.1 · 2,003–3,523 bp · −
OOC40_pgp086 · NC_067642.1 · 4,788–5,933 bp · −
trnQ-UUG · NC_067642.1 · 6,895–6,966 bp · −
trnS-GCU · NC_067642.1 · 8,200–8,287 bp · −
atpA · NC_067642.1 · 10,174–11,697 bp · −
atpF · NC_067642.1 · 11,803–13,048 bp · −
atpH · NC_067642.1 · 13,340–13,585 bp · −
atpI · NC_067642.1 · 14,587–15,330 bp · −
rps2 · NC_067642.1 · 15,556–16,266 bp · −
rpoC2 · NC_067642.1 · 16,482–20,663 bp · −
rpoC1 · NC_067642.1 · 20,828–23,661 bp · −
rpoB · NC_067642.1 · 23,688–26,900 bp · −
psbM · NC_067642.1 · 29,405–29,509 bp · −
trnD-GUC · NC_067642.1 · 30,028–30,101 bp · −
trnY-GUA · NC_067642.1 · 30,212–30,295 bp · −
trnE-UUC · NC_067642.1 · 30,373–30,445 bp · −
trnS-UGA · NC_067642.1 · 35,110–35,202 bp · −
trnfM-CAU · NC_067642.1 · 36,237–36,310 bp · −
rps14 · NC_067642.1 · 36,456–36,758 bp · −
psaB · NC_067642.1 · 36,881–39,085 bp · −
psaA · NC_067642.1 · 39,111–41,363 bp · −
ycf3 · NC_067642.1 · 42,138–44,085 bp · −
rps4 · NC_067642.1 · 45,332–45,937 bp · −
trnT-UGU · NC_067642.1 · 46,351–46,423 bp · −
ndhJ · NC_067642.1 · 48,708–49,184 bp · −
ndhK · NC_067642.1 · 49,295–49,972 bp · −
ndhC · NC_067642.1 · 50,024–50,386 bp · −
trnV-UAC · NC_067642.1 · 51,349–52,005 bp · −
atpE · NC_067642.1 · 52,459–52,860 bp · −
atpB · NC_067642.1 · 52,857–54,353 bp · −
psbJ · NC_067642.1 · 64,076–64,198 bp · −
psbL · NC_067642.1 · 64,333–64,449 bp · −
psbF · NC_067642.1 · 64,473–64,592 bp · −
psbE · NC_067642.1 · 64,607–64,858 bp · −
trnW-CCA · NC_067642.1 · 66,257–66,330 bp · −
trnP-UGG · NC_067642.1 · 66,499–66,572 bp · −
rpl20 · NC_067642.1 · 68,357–68,743 bp · −
rps12 · NC_067642.1 · 69,475–69,588 bp · −
rps12 · NC_067642.1 · 96,887–97,679 bp · −
clpP · NC_067642.1 · 69,707–71,621 bp · −
psbN · NC_067642.1 · 73,971–74,102 bp · −
rpoA · NC_067642.1 · 77,476–78,489 bp · −
rps11 · NC_067642.1 · 78,561–78,977 bp · −
rpl36 · NC_067642.1 · 79,093–79,206 bp · −
infA · NC_067642.1 · 79,302–79,535 bp · −
rps8 · NC_067642.1 · 79,663–80,067 bp · −
rpl14 · NC_067642.1 · 80,250–80,618 bp · −
rpl16 · NC_067642.1 · 80,752–82,019 bp · −
rps3 · NC_067642.1 · 82,163–82,825 bp · −
rpl22 · NC_067642.1 · 82,810–83,283 bp · −
rps19 · NC_067642.1 · 83,348–83,626 bp · −
rpl2 · NC_067642.1 · 83,694–85,172 bp · −
rpl23 · NC_067642.1 · 85,191–85,472 bp · −
trnI-CAU · NC_067642.1 · 85,638–85,711 bp · −
trnL-CAA · NC_067642.1 · 93,236–93,316 bp · −
ndhB · NC_067642.1 · 93,888–96,095 bp · −
rps7 · NC_067642.1 · 96,366–96,833 bp · −
trnN-GUU · NC_067642.1 · 107,835–107,906 bp · −
ndhF · NC_067642.1 · 109,272–111,503 bp · −
ndhD · NC_067642.1 · 114,177–115,706 bp · −
psaC · NC_067642.1 · 115,797–116,042 bp · −
ndhE · NC_067642.1 · 116,298–116,603 bp · −
ndhG · NC_067642.1 · 116,818–117,348 bp · −
ndhI · NC_067642.1 · 117,707–118,213 bp · −
ndhA · NC_067642.1 · 118,294–120,416 bp · −
ndhH · NC_067642.1 · 120,418–121,599 bp · −
rps15 · NC_067642.1 · 121,714–121,986 bp · −
ycf1 · NC_067642.1 · 122,416–127,938 bp · −
trnR-ACG · NC_067642.1 · 128,914–128,987 bp · −
rrn5 · NC_067642.1 · 129,231–129,351 bp · −
rrn4.5 · NC_067642.1 · 129,607–129,709 bp · −
rrn23 · NC_067642.1 · 129,808–132,618 bp · −
trnA-UGC · NC_067642.1 · 132,790–133,676 bp · −
trnI-GAU · NC_067642.1 · 133,741–134,759 bp · −
rrn16 · NC_067642.1 · 135,057–136,547 bp · −
trnV-GAC · NC_067642.1 · 136,774–136,845 bp · −
ycf15 · NC_067642.1 · 143,211–143,360 bp · −
ycf2 · NC_067642.1 · 143,550–150,380 bp · −
psbK · NC_067642.1 · 7,360–7,545 bp · +
psbI · NC_067642.1 · 7,933–8,043 bp · +
trnG-UCC · NC_067642.1 · 9,049–9,808 bp · +
trnR-UCU · NC_067642.1 · 9,999–10,070 bp · +
trnC-GCA · NC_067642.1 · 28,090–28,160 bp · +
petN · NC_067642.1 · 28,323–28,412 bp · +
trnT-GGU · NC_067642.1 · 31,055–31,126 bp · +
psbD · NC_067642.1 · 32,444–33,505 bp · +
psbC · NC_067642.1 · 33,453–34,874 bp · +
psbZ · NC_067642.1 · 35,543–35,731 bp · +
trnG-GCC · NC_067642.1 · 35,976–36,046 bp · +
trnS-GGA · NC_067642.1 · 44,949–45,035 bp · +
trnL-UAA · NC_067642.1 · 47,110–47,674 bp · +
trnF-GAA · NC_067642.1 · 47,968–48,040 bp · +
trnM-CAU · NC_067642.1 · 52,186–52,258 bp · +
rbcL · NC_067642.1 · 55,145–56,578 bp · +
accD · NC_067642.1 · 57,289–58,770 bp · +
psaI · NC_067642.1 · 59,470–59,580 bp · +
ycf4 · NC_067642.1 · 60,028–60,582 bp · +
cemA · NC_067642.1 · 61,173–61,862 bp · +
petA · NC_067642.1 · 62,077–63,039 bp · +
petL · NC_067642.1 · 65,751–65,846 bp · +
petG · NC_067642.1 · 66,021–66,134 bp · +
psaJ · NC_067642.1 · 66,854–66,988 bp · +
rpl33 · NC_067642.1 · 67,450–67,650 bp · +
rps18 · NC_067642.1 · 67,817–68,122 bp · +
rps12 · NC_067642.1 · 138,507–139,299 bp · +
psbB · NC_067642.1 · 72,094–73,620 bp · +
psbT · NC_067642.1 · 73,804–73,905 bp · +
psbH · NC_067642.1 · 74,208–74,426 bp · +
petB · NC_067642.1 · 74,552–75,918 bp · +
petD · NC_067642.1 · 76,107–77,299 bp · +
ycf2 · NC_067642.1 · 85,806–92,636 bp · +
ycf15 · NC_067642.1 · 92,826–92,975 bp · +
trnV-GAC · NC_067642.1 · 99,341–99,412 bp · +
rrn16 · NC_067642.1 · 99,639–101,129 bp · +
trnI-GAU · NC_067642.1 · 101,427–102,445 bp · +
trnA-UGC · NC_067642.1 · 102,510–103,396 bp · +
rrn23 · NC_067642.1 · 103,568–106,378 bp · +
rrn4.5 · NC_067642.1 · 106,477–106,579 bp · +
rrn5 · NC_067642.1 · 106,835–106,955 bp · +
trnR-ACG · NC_067642.1 · 107,199–107,272 bp · +
ycf1 · NC_067642.1 · 108,248–109,378 bp · +
rpl32 · NC_067642.1 · 111,971–112,141 bp · +
trnL-UAG · NC_067642.1 · 112,907–112,986 bp · +
ccsA · NC_067642.1 · 113,075–113,944 bp · +
trnN-GUU · NC_067642.1 · 128,280–128,351 bp · +
rps7 · NC_067642.1 · 139,353–139,820 bp · +
ndhB · NC_067642.1 · 140,091–142,298 bp · +
trnL-CAA · NC_067642.1 · 142,870–142,950 bp · +
trnI-CAU · NC_067642.1 · 150,475–150,548 bp · +
rpl23 · NC_067642.1 · 150,714–150,995 bp · +
rpl2 · NC_067642.1 · 151,014–152,492 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon adenanthus
ANNOTATED PLASTOME
NC_067642.1
152,602 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38150 76301 114452 152602 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC40_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
OOC40_pgp086 gene − 4788 5933 1146 Locate
trnQ-UUG gene − 6895 6966 72 Locate
psbK gene + 7360 7545 186 Locate
psbI gene + 7933 8043 111 Locate
trnS-GCU gene − 8200 8287 88 Locate
trnG-UCC gene + 9049 9808 760 Locate
trnR-UCU gene + 9999 10070 72 Locate
atpA gene − 10174 11697 1524 Locate
atpF gene − 11803 13048 1246 Locate
atpH gene − 13340 13585 246 Locate
atpI gene − 14587 15330 744 Locate
rps2 gene − 15556 16266 711 Locate
rpoC2 gene − 16482 20663 4182 Locate
rpoC1 gene − 20828 23661 2834 Locate
rpoB gene − 23688 26900 3213 Locate
trnC-GCA gene + 28090 28160 71 Locate
petN gene + 28323 28412 90 Locate
psbM gene − 29405 29509 105 Locate
trnD-GUC gene − 30028 30101 74 Locate
trnY-GUA gene − 30212 30295 84 Locate
trnE-UUC gene − 30373 30445 73 Locate
trnT-GGU gene + 31055 31126 72 Locate
psbD gene + 32444 33505 1062 Locate
psbC gene + 33453 34874 1422 Locate
trnS-UGA gene − 35110 35202 93 Locate
psbZ gene + 35543 35731 189 Locate
trnG-GCC gene + 35976 36046 71 Locate
trnfM-CAU gene − 36237 36310 74 Locate
rps14 gene − 36456 36758 303 Locate
psaB gene − 36881 39085 2205 Locate
psaA gene − 39111 41363 2253 Locate
ycf3 gene − 42138 44085 1948 Locate
trnS-GGA gene + 44949 45035 87 Locate
rps4 gene − 45332 45937 606 Locate
trnT-UGU gene − 46351 46423 73 Locate
trnL-UAA gene + 47110 47674 565 Locate
trnF-GAA gene + 47968 48040 73 Locate
ndhJ gene − 48708 49184 477 Locate
ndhK gene − 49295 49972 678 Locate
ndhC gene − 50024 50386 363 Locate
trnV-UAC gene − 51349 52005 657 Locate
trnM-CAU gene + 52186 52258 73 Locate
atpE gene − 52459 52860 402 Locate
atpB gene − 52857 54353 1497 Locate
rbcL gene + 55145 56578 1434 Locate
accD gene + 57289 58770 1482 Locate
psaI gene + 59470 59580 111 Locate
ycf4 gene + 60028 60582 555 Locate
cemA gene + 61173 61862 690 Locate
petA gene + 62077 63039 963 Locate
psbJ gene − 64076 64198 123 Locate
psbL gene − 64333 64449 117 Locate
psbF gene − 64473 64592 120 Locate
psbE gene − 64607 64858 252 Locate
petL gene + 65751 65846 96 Locate
petG gene + 66021 66134 114 Locate
trnW-CCA gene − 66257 66330 74 Locate
trnP-UGG gene − 66499 66572 74 Locate
psaJ gene + 66854 66988 135 Locate
rpl33 gene + 67450 67650 201 Locate
rps18 gene + 67817 68122 306 Locate
rpl20 gene − 68357 68743 387 Locate
rps12 gene − 69475 69588 114 Locate
clpP gene − 69707 71621 1915 Locate
psbB gene + 72094 73620 1527 Locate
psbT gene + 73804 73905 102 Locate
psbN gene − 73971 74102 132 Locate
psbH gene + 74208 74426 219 Locate
petB gene + 74552 75918 1367 Locate
petD gene + 76107 77299 1193 Locate
rpoA gene − 77476 78489 1014 Locate
rps11 gene − 78561 78977 417 Locate
rpl36 gene − 79093 79206 114 Locate
infA gene − 79302 79535 234 Locate
rps8 gene − 79663 80067 405 Locate
rpl14 gene − 80250 80618 369 Locate
rpl16 gene − 80752 82019 1268 Locate
rps3 gene − 82163 82825 663 Locate
rpl22 gene − 82810 83283 474 Locate
rps19 gene − 83348 83626 279 Locate
rpl2 gene − 83694 85172 1479 Locate
rpl23 gene − 85191 85472 282 Locate
trnI-CAU gene − 85638 85711 74 Locate
ycf2 gene + 85806 92636 6831 Locate
ycf15 gene + 92826 92975 150 Locate
trnL-CAA gene − 93236 93316 81 Locate
ndhB gene − 93888 96095 2208 Locate
rps7 gene − 96366 96833 468 Locate
rps12 gene − 96887 97679 793 Locate
trnV-GAC gene + 99341 99412 72 Locate
rrn16 gene + 99639 101129 1491 Locate
trnI-GAU gene + 101427 102445 1019 Locate
trnA-UGC gene + 102510 103396 887 Locate
rrn23 gene + 103568 106378 2811 Locate
rrn4.5 gene + 106477 106579 103 Locate
rrn5 gene + 106835 106955 121 Locate
trnR-ACG gene + 107199 107272 74 Locate
trnN-GUU gene − 107835 107906 72 Locate
ycf1 gene + 108248 109378 1131 Locate
ndhF gene − 109272 111503 2232 Locate
rpl32 gene + 111971 112141 171 Locate
trnL-UAG gene + 112907 112986 80 Locate
ccsA gene + 113075 113944 870 Locate
ndhD gene − 114177 115706 1530 Locate
psaC gene − 115797 116042 246 Locate
ndhE gene − 116298 116603 306 Locate
ndhG gene − 116818 117348 531 Locate
ndhI gene − 117707 118213 507 Locate
ndhA gene − 118294 120416 2123 Locate
ndhH gene − 120418 121599 1182 Locate
rps15 gene − 121714 121986 273 Locate
ycf1 gene − 122416 127938 5523 Locate
trnN-GUU gene + 128280 128351 72 Locate
trnR-ACG gene − 128914 128987 74 Locate
rrn5 gene − 129231 129351 121 Locate
rrn4.5 gene − 129607 129709 103 Locate
rrn23 gene − 129808 132618 2811 Locate
trnA-UGC gene − 132790 133676 887 Locate
trnI-GAU gene − 133741 134759 1019 Locate
rrn16 gene − 135057 136547 1491 Locate
trnV-GAC gene − 136774 136845 72 Locate
rps12 gene + 138507 139299 793 Locate
rps7 gene + 139353 139820 468 Locate
ndhB gene + 140091 142298 2208 Locate
trnL-CAA gene + 142870 142950 81 Locate
ycf15 gene − 143211 143360 150 Locate
ycf2 gene − 143550 150380 6831 Locate
trnI-CAU gene + 150475 150548 74 Locate
rpl23 gene + 150714 150995 282 Locate
rpl2 gene + 151014 152492 1479 Locate
Status Available
Accession NC_067642.1
Length 152,602 bp
GC content 37.7%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources