Isodon albopilosus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067643.1 · 11–85 bp · −
psbA · NC_067643.1 · 393–1,451 bp · −
trnK-UUU · NC_067643.1 · 1,683–4,263 bp · −
matK · NC_067643.1 · 2,003–3,523 bp · −
ON979_pgp086 · NC_067643.1 · 4,791–5,936 bp · −
trnQ-UUG · NC_067643.1 · 6,910–6,981 bp · −
trnS-GCU · NC_067643.1 · 8,213–8,300 bp · −
atpA · NC_067643.1 · 10,196–11,719 bp · −
atpF · NC_067643.1 · 11,823–13,068 bp · −
atpH · NC_067643.1 · 13,360–13,605 bp · −
atpI · NC_067643.1 · 14,606–15,349 bp · −
rps2 · NC_067643.1 · 15,575–16,285 bp · −
rpoC2 · NC_067643.1 · 16,502–20,683 bp · −
rpoC1 · NC_067643.1 · 20,848–23,681 bp · −
rpoB · NC_067643.1 · 23,708–26,920 bp · −
psbM · NC_067643.1 · 29,428–29,532 bp · −
trnD-GUC · NC_067643.1 · 30,051–30,124 bp · −
trnY-GUA · NC_067643.1 · 30,235–30,318 bp · −
trnE-UUC · NC_067643.1 · 30,396–30,468 bp · −
trnS-UGA · NC_067643.1 · 35,134–35,226 bp · −
trnfM-CAU · NC_067643.1 · 36,259–36,332 bp · −
rps14 · NC_067643.1 · 36,478–36,780 bp · −
psaB · NC_067643.1 · 36,903–39,107 bp · −
psaA · NC_067643.1 · 39,133–41,385 bp · −
ycf3 · NC_067643.1 · 42,157–44,104 bp · −
rps4 · NC_067643.1 · 45,351–45,956 bp · −
trnT-UGU · NC_067643.1 · 46,351–46,423 bp · −
ndhJ · NC_067643.1 · 48,700–49,176 bp · −
ndhK · NC_067643.1 · 49,287–49,964 bp · −
ndhC · NC_067643.1 · 50,016–50,378 bp · −
trnV-UAC · NC_067643.1 · 51,334–51,989 bp · −
atpE · NC_067643.1 · 52,443–52,844 bp · −
atpB · NC_067643.1 · 52,841–54,337 bp · −
psbJ · NC_067643.1 · 64,058–64,180 bp · −
psbL · NC_067643.1 · 64,315–64,431 bp · −
psbF · NC_067643.1 · 64,455–64,574 bp · −
psbE · NC_067643.1 · 64,589–64,840 bp · −
trnW-CCA · NC_067643.1 · 66,239–66,312 bp · −
trnP-UGG · NC_067643.1 · 66,481–66,554 bp · −
rpl20 · NC_067643.1 · 68,339–68,725 bp · −
rps12 · NC_067643.1 · 69,459–69,572 bp · −
rps12 · NC_067643.1 · 96,874–97,666 bp · −
clpP · NC_067643.1 · 69,696–71,612 bp · −
psbN · NC_067643.1 · 73,963–74,094 bp · −
rpoA · NC_067643.1 · 77,462–78,469 bp · −
rps11 · NC_067643.1 · 78,541–78,957 bp · −
rpl36 · NC_067643.1 · 79,073–79,186 bp · −
infA · NC_067643.1 · 79,282–79,515 bp · −
rps8 · NC_067643.1 · 79,642–80,046 bp · −
rpl14 · NC_067643.1 · 80,237–80,605 bp · −
rpl16 · NC_067643.1 · 80,739–82,006 bp · −
rps3 · NC_067643.1 · 82,150–82,812 bp · −
rpl22 · NC_067643.1 · 82,797–83,270 bp · −
rps19 · NC_067643.1 · 83,335–83,613 bp · −
rpl2 · NC_067643.1 · 83,681–85,159 bp · −
rpl23 · NC_067643.1 · 85,178–85,459 bp · −
trnI-CAU · NC_067643.1 · 85,625–85,698 bp · −
trnL-CAA · NC_067643.1 · 93,223–93,303 bp · −
ndhB · NC_067643.1 · 93,875–96,082 bp · −
rps7 · NC_067643.1 · 96,353–96,820 bp · −
trnN-GUU · NC_067643.1 · 107,818–107,889 bp · −
ndhF · NC_067643.1 · 109,255–111,486 bp · −
ndhD · NC_067643.1 · 114,259–115,788 bp · −
psaC · NC_067643.1 · 115,879–116,124 bp · −
ndhE · NC_067643.1 · 116,380–116,685 bp · −
ndhG · NC_067643.1 · 116,900–117,430 bp · −
ndhI · NC_067643.1 · 117,791–118,297 bp · −
ndhA · NC_067643.1 · 118,378–120,501 bp · −
ndhH · NC_067643.1 · 120,503–121,684 bp · −
rps15 · NC_067643.1 · 121,799–122,071 bp · −
ycf1 · NC_067643.1 · 122,501–128,041 bp · −
trnR-ACG · NC_067643.1 · 129,021–129,094 bp · −
rrn5 · NC_067643.1 · 129,338–129,458 bp · −
rrn4.5 · NC_067643.1 · 129,714–129,816 bp · −
rrn23 · NC_067643.1 · 129,915–132,725 bp · −
trnA-UGC · NC_067643.1 · 132,897–133,775 bp · −
trnI-GAU · NC_067643.1 · 133,840–134,858 bp · −
rrn16 · NC_067643.1 · 135,156–136,646 bp · −
trnV-GAC · NC_067643.1 · 136,873–136,944 bp · −
ycf15 · NC_067643.1 · 143,310–143,459 bp · −
ycf2 · NC_067643.1 · 143,649–150,479 bp · −
psbK · NC_067643.1 · 7,375–7,560 bp · +
psbI · NC_067643.1 · 7,948–8,058 bp · +
trnG-UCC · NC_067643.1 · 9,062–9,821 bp · +
trnR-UCU · NC_067643.1 · 10,012–10,083 bp · +
trnC-GCA · NC_067643.1 · 28,110–28,180 bp · +
petN · NC_067643.1 · 28,343–28,432 bp · +
trnT-GGU · NC_067643.1 · 31,078–31,149 bp · +
psbD · NC_067643.1 · 32,467–33,528 bp · +
psbC · NC_067643.1 · 33,476–34,897 bp · +
psbZ · NC_067643.1 · 35,567–35,755 bp · +
trnG-GCC · NC_067643.1 · 36,000–36,070 bp · +
trnS-GGA · NC_067643.1 · 44,968–45,054 bp · +
trnL-UAA · NC_067643.1 · 47,123–47,666 bp · +
trnF-GAA · NC_067643.1 · 47,960–48,032 bp · +
trnM-CAU · NC_067643.1 · 52,170–52,242 bp · +
rbcL · NC_067643.1 · 55,128–56,561 bp · +
accD · NC_067643.1 · 57,266–58,747 bp · +
psaI · NC_067643.1 · 59,448–59,558 bp · +
ycf4 · NC_067643.1 · 60,004–60,558 bp · +
cemA · NC_067643.1 · 61,149–61,838 bp · +
petA · NC_067643.1 · 62,053–63,015 bp · +
petL · NC_067643.1 · 65,733–65,828 bp · +
petG · NC_067643.1 · 66,003–66,116 bp · +
psaJ · NC_067643.1 · 66,836–66,970 bp · +
rpl33 · NC_067643.1 · 67,433–67,633 bp · +
rps18 · NC_067643.1 · 67,800–68,105 bp · +
rps12 · NC_067643.1 · 138,606–139,398 bp · +
psbB · NC_067643.1 · 72,085–73,611 bp · +
psbT · NC_067643.1 · 73,796–73,897 bp · +
psbH · NC_067643.1 · 74,200–74,418 bp · +
petB · NC_067643.1 · 74,544–75,904 bp · +
petD · NC_067643.1 · 76,093–77,285 bp · +
ycf2 · NC_067643.1 · 85,793–92,623 bp · +
ycf15 · NC_067643.1 · 92,813–92,962 bp · +
trnV-GAC · NC_067643.1 · 99,328–99,399 bp · +
rrn16 · NC_067643.1 · 99,626–101,116 bp · +
trnI-GAU · NC_067643.1 · 101,414–102,432 bp · +
trnA-UGC · NC_067643.1 · 102,497–103,375 bp · +
rrn23 · NC_067643.1 · 103,547–106,357 bp · +
rrn4.5 · NC_067643.1 · 106,456–106,558 bp · +
rrn5 · NC_067643.1 · 106,814–106,934 bp · +
trnR-ACG · NC_067643.1 · 107,178–107,251 bp · +
ycf1 · NC_067643.1 · 108,231–109,361 bp · +
rpl32 · NC_067643.1 · 111,955–112,125 bp · +
trnL-UAG · NC_067643.1 · 112,888–112,967 bp · +
ccsA · NC_067643.1 · 113,056–114,027 bp · +
trnN-GUU · NC_067643.1 · 128,383–128,454 bp · +
rps7 · NC_067643.1 · 139,452–139,919 bp · +
ndhB · NC_067643.1 · 140,190–142,397 bp · +
trnL-CAA · NC_067643.1 · 142,969–143,049 bp · +
trnI-CAU · NC_067643.1 · 150,574–150,647 bp · +
rpl23 · NC_067643.1 · 150,813–151,094 bp · +
rpl2 · NC_067643.1 · 151,113–152,591 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon albopilosus
ANNOTATED PLASTOME
NC_067643.1
152,701 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38175 76350 114526 152701 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON979_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
ON979_pgp086 gene − 4791 5936 1146 Locate
trnQ-UUG gene − 6910 6981 72 Locate
psbK gene + 7375 7560 186 Locate
psbI gene + 7948 8058 111 Locate
trnS-GCU gene − 8213 8300 88 Locate
trnG-UCC gene + 9062 9821 760 Locate
trnR-UCU gene + 10012 10083 72 Locate
atpA gene − 10196 11719 1524 Locate
atpF gene − 11823 13068 1246 Locate
atpH gene − 13360 13605 246 Locate
atpI gene − 14606 15349 744 Locate
rps2 gene − 15575 16285 711 Locate
rpoC2 gene − 16502 20683 4182 Locate
rpoC1 gene − 20848 23681 2834 Locate
rpoB gene − 23708 26920 3213 Locate
trnC-GCA gene + 28110 28180 71 Locate
petN gene + 28343 28432 90 Locate
psbM gene − 29428 29532 105 Locate
trnD-GUC gene − 30051 30124 74 Locate
trnY-GUA gene − 30235 30318 84 Locate
trnE-UUC gene − 30396 30468 73 Locate
trnT-GGU gene + 31078 31149 72 Locate
psbD gene + 32467 33528 1062 Locate
psbC gene + 33476 34897 1422 Locate
trnS-UGA gene − 35134 35226 93 Locate
psbZ gene + 35567 35755 189 Locate
trnG-GCC gene + 36000 36070 71 Locate
trnfM-CAU gene − 36259 36332 74 Locate
rps14 gene − 36478 36780 303 Locate
psaB gene − 36903 39107 2205 Locate
psaA gene − 39133 41385 2253 Locate
ycf3 gene − 42157 44104 1948 Locate
trnS-GGA gene + 44968 45054 87 Locate
rps4 gene − 45351 45956 606 Locate
trnT-UGU gene − 46351 46423 73 Locate
trnL-UAA gene + 47123 47666 544 Locate
trnF-GAA gene + 47960 48032 73 Locate
ndhJ gene − 48700 49176 477 Locate
ndhK gene − 49287 49964 678 Locate
ndhC gene − 50016 50378 363 Locate
trnV-UAC gene − 51334 51989 656 Locate
trnM-CAU gene + 52170 52242 73 Locate
atpE gene − 52443 52844 402 Locate
atpB gene − 52841 54337 1497 Locate
rbcL gene + 55128 56561 1434 Locate
accD gene + 57266 58747 1482 Locate
psaI gene + 59448 59558 111 Locate
ycf4 gene + 60004 60558 555 Locate
cemA gene + 61149 61838 690 Locate
petA gene + 62053 63015 963 Locate
psbJ gene − 64058 64180 123 Locate
psbL gene − 64315 64431 117 Locate
psbF gene − 64455 64574 120 Locate
psbE gene − 64589 64840 252 Locate
petL gene + 65733 65828 96 Locate
petG gene + 66003 66116 114 Locate
trnW-CCA gene − 66239 66312 74 Locate
trnP-UGG gene − 66481 66554 74 Locate
psaJ gene + 66836 66970 135 Locate
rpl33 gene + 67433 67633 201 Locate
rps18 gene + 67800 68105 306 Locate
rpl20 gene − 68339 68725 387 Locate
rps12 gene − 69459 69572 114 Locate
clpP gene − 69696 71612 1917 Locate
psbB gene + 72085 73611 1527 Locate
psbT gene + 73796 73897 102 Locate
psbN gene − 73963 74094 132 Locate
psbH gene + 74200 74418 219 Locate
petB gene + 74544 75904 1361 Locate
petD gene + 76093 77285 1193 Locate
rpoA gene − 77462 78469 1008 Locate
rps11 gene − 78541 78957 417 Locate
rpl36 gene − 79073 79186 114 Locate
infA gene − 79282 79515 234 Locate
rps8 gene − 79642 80046 405 Locate
rpl14 gene − 80237 80605 369 Locate
rpl16 gene − 80739 82006 1268 Locate
rps3 gene − 82150 82812 663 Locate
rpl22 gene − 82797 83270 474 Locate
rps19 gene − 83335 83613 279 Locate
rpl2 gene − 83681 85159 1479 Locate
rpl23 gene − 85178 85459 282 Locate
trnI-CAU gene − 85625 85698 74 Locate
ycf2 gene + 85793 92623 6831 Locate
ycf15 gene + 92813 92962 150 Locate
trnL-CAA gene − 93223 93303 81 Locate
ndhB gene − 93875 96082 2208 Locate
rps7 gene − 96353 96820 468 Locate
rps12 gene − 96874 97666 793 Locate
trnV-GAC gene + 99328 99399 72 Locate
rrn16 gene + 99626 101116 1491 Locate
trnI-GAU gene + 101414 102432 1019 Locate
trnA-UGC gene + 102497 103375 879 Locate
rrn23 gene + 103547 106357 2811 Locate
rrn4.5 gene + 106456 106558 103 Locate
rrn5 gene + 106814 106934 121 Locate
trnR-ACG gene + 107178 107251 74 Locate
trnN-GUU gene − 107818 107889 72 Locate
ycf1 gene + 108231 109361 1131 Locate
ndhF gene − 109255 111486 2232 Locate
rpl32 gene + 111955 112125 171 Locate
trnL-UAG gene + 112888 112967 80 Locate
ccsA gene + 113056 114027 972 Locate
ndhD gene − 114259 115788 1530 Locate
psaC gene − 115879 116124 246 Locate
ndhE gene − 116380 116685 306 Locate
ndhG gene − 116900 117430 531 Locate
ndhI gene − 117791 118297 507 Locate
ndhA gene − 118378 120501 2124 Locate
ndhH gene − 120503 121684 1182 Locate
rps15 gene − 121799 122071 273 Locate
ycf1 gene − 122501 128041 5541 Locate
trnN-GUU gene + 128383 128454 72 Locate
trnR-ACG gene − 129021 129094 74 Locate
rrn5 gene − 129338 129458 121 Locate
rrn4.5 gene − 129714 129816 103 Locate
rrn23 gene − 129915 132725 2811 Locate
trnA-UGC gene − 132897 133775 879 Locate
trnI-GAU gene − 133840 134858 1019 Locate
rrn16 gene − 135156 136646 1491 Locate
trnV-GAC gene − 136873 136944 72 Locate
rps12 gene + 138606 139398 793 Locate
rps7 gene + 139452 139919 468 Locate
ndhB gene + 140190 142397 2208 Locate
trnL-CAA gene + 142969 143049 81 Locate
ycf15 gene − 143310 143459 150 Locate
ycf2 gene − 143649 150479 6831 Locate
trnI-CAU gene + 150574 150647 74 Locate
rpl23 gene + 150813 151094 282 Locate
rpl2 gene + 151113 152591 1479 Locate
Status Available
Accession NC_067643.1
Length 152,701 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources