Isodon barbeyanus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067649.1 · 11–85 bp · −
psbA · NC_067649.1 · 405–1,463 bp · −
trnK-UUU · NC_067649.1 · 1,695–4,276 bp · −
matK · NC_067649.1 · 2,016–3,536 bp · −
ON976_pgp086 · NC_067649.1 · 4,802–5,947 bp · −
trnQ-UUG · NC_067649.1 · 6,887–6,958 bp · −
trnS-GCU · NC_067649.1 · 8,191–8,278 bp · −
atpA · NC_067649.1 · 10,166–11,689 bp · −
atpF · NC_067649.1 · 11,799–13,044 bp · −
atpH · NC_067649.1 · 13,336–13,581 bp · −
atpI · NC_067649.1 · 14,582–15,325 bp · −
rps2 · NC_067649.1 · 15,551–16,261 bp · −
rpoC2 · NC_067649.1 · 16,478–20,659 bp · −
rpoC1 · NC_067649.1 · 20,824–23,657 bp · −
rpoB · NC_067649.1 · 23,684–26,896 bp · −
psbM · NC_067649.1 · 29,399–29,503 bp · −
trnD-GUC · NC_067649.1 · 30,022–30,095 bp · −
trnY-GUA · NC_067649.1 · 30,206–30,289 bp · −
trnE-UUC · NC_067649.1 · 30,367–30,439 bp · −
trnS-UGA · NC_067649.1 · 35,105–35,197 bp · −
trnfM-CAU · NC_067649.1 · 36,229–36,302 bp · −
rps14 · NC_067649.1 · 36,448–36,750 bp · −
psaB · NC_067649.1 · 36,873–39,077 bp · −
psaA · NC_067649.1 · 39,103–41,355 bp · −
ycf3 · NC_067649.1 · 42,126–44,073 bp · −
rps4 · NC_067649.1 · 45,324–45,929 bp · −
trnT-UGU · NC_067649.1 · 46,328–46,400 bp · −
ndhJ · NC_067649.1 · 48,684–49,160 bp · −
ndhK · NC_067649.1 · 49,271–49,948 bp · −
ndhC · NC_067649.1 · 50,000–50,362 bp · −
trnV-UAC · NC_067649.1 · 51,314–51,969 bp · −
atpE · NC_067649.1 · 52,423–52,824 bp · −
atpB · NC_067649.1 · 52,821–54,317 bp · −
psbJ · NC_067649.1 · 64,027–64,149 bp · −
psbL · NC_067649.1 · 64,284–64,400 bp · −
psbF · NC_067649.1 · 64,424–64,543 bp · −
psbE · NC_067649.1 · 64,558–64,809 bp · −
trnW-CCA · NC_067649.1 · 66,208–66,281 bp · −
trnP-UGG · NC_067649.1 · 66,450–66,523 bp · −
rpl20 · NC_067649.1 · 68,310–68,696 bp · −
rps12 · NC_067649.1 · 69,427–69,540 bp · −
rps12 · NC_067649.1 · 96,828–97,620 bp · −
clpP · NC_067649.1 · 69,659–71,576 bp · −
psbN · NC_067649.1 · 73,926–74,057 bp · −
rpoA · NC_067649.1 · 77,425–78,432 bp · −
rps11 · NC_067649.1 · 78,504–78,920 bp · −
rpl36 · NC_067649.1 · 79,036–79,149 bp · −
infA · NC_067649.1 · 79,245–79,478 bp · −
rps8 · NC_067649.1 · 79,604–80,008 bp · −
rpl14 · NC_067649.1 · 80,191–80,559 bp · −
rpl16 · NC_067649.1 · 80,693–81,960 bp · −
rps3 · NC_067649.1 · 82,104–82,766 bp · −
rpl22 · NC_067649.1 · 82,751–83,224 bp · −
rps19 · NC_067649.1 · 83,289–83,567 bp · −
rpl2 · NC_067649.1 · 83,635–85,113 bp · −
rpl23 · NC_067649.1 · 85,132–85,413 bp · −
trnI-CAU · NC_067649.1 · 85,579–85,652 bp · −
trnL-CAA · NC_067649.1 · 93,177–93,257 bp · −
ndhB · NC_067649.1 · 93,829–96,036 bp · −
rps7 · NC_067649.1 · 96,307–96,774 bp · −
trnN-GUU · NC_067649.1 · 107,772–107,843 bp · −
ndhF · NC_067649.1 · 109,209–111,440 bp · −
ndhD · NC_067649.1 · 114,222–115,751 bp · −
psaC · NC_067649.1 · 115,842–116,087 bp · −
ndhE · NC_067649.1 · 116,343–116,648 bp · −
ndhG · NC_067649.1 · 116,863–117,393 bp · −
ndhI · NC_067649.1 · 117,753–118,259 bp · −
ndhA · NC_067649.1 · 118,340–120,463 bp · −
ndhH · NC_067649.1 · 120,465–121,646 bp · −
rps15 · NC_067649.1 · 121,761–122,024 bp · −
ycf1 · NC_067649.1 · 122,454–127,994 bp · −
trnR-ACG · NC_067649.1 · 128,974–129,047 bp · −
rrn5 · NC_067649.1 · 129,291–129,411 bp · −
rrn4.5 · NC_067649.1 · 129,667–129,769 bp · −
rrn23 · NC_067649.1 · 129,868–132,678 bp · −
trnA-UGC · NC_067649.1 · 132,850–133,728 bp · −
trnI-GAU · NC_067649.1 · 133,793–134,811 bp · −
rrn16 · NC_067649.1 · 135,109–136,599 bp · −
trnV-GAC · NC_067649.1 · 136,826–136,897 bp · −
ycf15 · NC_067649.1 · 143,263–143,412 bp · −
ycf2 · NC_067649.1 · 143,602–150,432 bp · −
psbK · NC_067649.1 · 7,352–7,537 bp · +
psbI · NC_067649.1 · 7,925–8,035 bp · +
trnG-UCC · NC_067649.1 · 9,041–9,800 bp · +
trnR-UCU · NC_067649.1 · 9,991–10,062 bp · +
trnC-GCA · NC_067649.1 · 28,085–28,155 bp · +
petN · NC_067649.1 · 28,318–28,407 bp · +
trnT-GGU · NC_067649.1 · 31,049–31,120 bp · +
psbD · NC_067649.1 · 32,438–33,499 bp · +
psbC · NC_067649.1 · 33,447–34,868 bp · +
psbZ · NC_067649.1 · 35,538–35,726 bp · +
trnG-GCC · NC_067649.1 · 35,971–36,041 bp · +
trnS-GGA · NC_067649.1 · 44,937–45,023 bp · +
trnL-UAA · NC_067649.1 · 47,086–47,650 bp · +
trnF-GAA · NC_067649.1 · 47,944–48,016 bp · +
trnM-CAU · NC_067649.1 · 52,150–52,222 bp · +
rbcL · NC_067649.1 · 55,108–56,541 bp · +
accD · NC_067649.1 · 57,240–58,721 bp · +
psaI · NC_067649.1 · 59,422–59,532 bp · +
ycf4 · NC_067649.1 · 59,984–60,538 bp · +
cemA · NC_067649.1 · 61,122–61,811 bp · +
petA · NC_067649.1 · 62,026–62,988 bp · +
petL · NC_067649.1 · 65,702–65,797 bp · +
petG · NC_067649.1 · 65,972–66,085 bp · +
psaJ · NC_067649.1 · 66,805–66,939 bp · +
rpl33 · NC_067649.1 · 67,401–67,601 bp · +
rps18 · NC_067649.1 · 67,768–68,073 bp · +
rps12 · NC_067649.1 · 138,559–139,351 bp · +
psbB · NC_067649.1 · 72,049–73,575 bp · +
psbT · NC_067649.1 · 73,759–73,860 bp · +
psbH · NC_067649.1 · 74,163–74,381 bp · +
petB · NC_067649.1 · 74,507–75,867 bp · +
petD · NC_067649.1 · 76,056–77,248 bp · +
ycf2 · NC_067649.1 · 85,747–92,577 bp · +
ycf15 · NC_067649.1 · 92,767–92,916 bp · +
trnV-GAC · NC_067649.1 · 99,282–99,353 bp · +
rrn16 · NC_067649.1 · 99,580–101,070 bp · +
trnI-GAU · NC_067649.1 · 101,368–102,386 bp · +
trnA-UGC · NC_067649.1 · 102,451–103,329 bp · +
rrn23 · NC_067649.1 · 103,501–106,311 bp · +
rrn4.5 · NC_067649.1 · 106,410–106,512 bp · +
rrn5 · NC_067649.1 · 106,768–106,888 bp · +
trnR-ACG · NC_067649.1 · 107,132–107,205 bp · +
ycf1 · NC_067649.1 · 108,185–109,315 bp · +
rpl32 · NC_067649.1 · 111,916–112,086 bp · +
trnL-UAG · NC_067649.1 · 112,851–112,930 bp · +
ccsA · NC_067649.1 · 113,019–113,990 bp · +
trnN-GUU · NC_067649.1 · 128,336–128,407 bp · +
rps7 · NC_067649.1 · 139,405–139,872 bp · +
ndhB · NC_067649.1 · 140,143–142,350 bp · +
trnL-CAA · NC_067649.1 · 142,922–143,002 bp · +
trnI-CAU · NC_067649.1 · 150,527–150,600 bp · +
rpl23 · NC_067649.1 · 150,766–151,047 bp · +
rpl2 · NC_067649.1 · 151,066–152,544 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon barbeyanus
ANNOTATED PLASTOME
NC_067649.1
152,654 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38164 76327 114490 152654 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON976_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 405 1463 1059 Locate
trnK-UUU gene − 1695 4276 2582 Locate
matK gene − 2016 3536 1521 Locate
ON976_pgp086 gene − 4802 5947 1146 Locate
trnQ-UUG gene − 6887 6958 72 Locate
psbK gene + 7352 7537 186 Locate
psbI gene + 7925 8035 111 Locate
trnS-GCU gene − 8191 8278 88 Locate
trnG-UCC gene + 9041 9800 760 Locate
trnR-UCU gene + 9991 10062 72 Locate
atpA gene − 10166 11689 1524 Locate
atpF gene − 11799 13044 1246 Locate
atpH gene − 13336 13581 246 Locate
atpI gene − 14582 15325 744 Locate
rps2 gene − 15551 16261 711 Locate
rpoC2 gene − 16478 20659 4182 Locate
rpoC1 gene − 20824 23657 2834 Locate
rpoB gene − 23684 26896 3213 Locate
trnC-GCA gene + 28085 28155 71 Locate
petN gene + 28318 28407 90 Locate
psbM gene − 29399 29503 105 Locate
trnD-GUC gene − 30022 30095 74 Locate
trnY-GUA gene − 30206 30289 84 Locate
trnE-UUC gene − 30367 30439 73 Locate
trnT-GGU gene + 31049 31120 72 Locate
psbD gene + 32438 33499 1062 Locate
psbC gene + 33447 34868 1422 Locate
trnS-UGA gene − 35105 35197 93 Locate
psbZ gene + 35538 35726 189 Locate
trnG-GCC gene + 35971 36041 71 Locate
trnfM-CAU gene − 36229 36302 74 Locate
rps14 gene − 36448 36750 303 Locate
psaB gene − 36873 39077 2205 Locate
psaA gene − 39103 41355 2253 Locate
ycf3 gene − 42126 44073 1948 Locate
trnS-GGA gene + 44937 45023 87 Locate
rps4 gene − 45324 45929 606 Locate
trnT-UGU gene − 46328 46400 73 Locate
trnL-UAA gene + 47086 47650 565 Locate
trnF-GAA gene + 47944 48016 73 Locate
ndhJ gene − 48684 49160 477 Locate
ndhK gene − 49271 49948 678 Locate
ndhC gene − 50000 50362 363 Locate
trnV-UAC gene − 51314 51969 656 Locate
trnM-CAU gene + 52150 52222 73 Locate
atpE gene − 52423 52824 402 Locate
atpB gene − 52821 54317 1497 Locate
rbcL gene + 55108 56541 1434 Locate
accD gene + 57240 58721 1482 Locate
psaI gene + 59422 59532 111 Locate
ycf4 gene + 59984 60538 555 Locate
cemA gene + 61122 61811 690 Locate
petA gene + 62026 62988 963 Locate
psbJ gene − 64027 64149 123 Locate
psbL gene − 64284 64400 117 Locate
psbF gene − 64424 64543 120 Locate
psbE gene − 64558 64809 252 Locate
petL gene + 65702 65797 96 Locate
petG gene + 65972 66085 114 Locate
trnW-CCA gene − 66208 66281 74 Locate
trnP-UGG gene − 66450 66523 74 Locate
psaJ gene + 66805 66939 135 Locate
rpl33 gene + 67401 67601 201 Locate
rps18 gene + 67768 68073 306 Locate
rpl20 gene − 68310 68696 387 Locate
rps12 gene − 69427 69540 114 Locate
clpP gene − 69659 71576 1918 Locate
psbB gene + 72049 73575 1527 Locate
psbT gene + 73759 73860 102 Locate
psbN gene − 73926 74057 132 Locate
psbH gene + 74163 74381 219 Locate
petB gene + 74507 75867 1361 Locate
petD gene + 76056 77248 1193 Locate
rpoA gene − 77425 78432 1008 Locate
rps11 gene − 78504 78920 417 Locate
rpl36 gene − 79036 79149 114 Locate
infA gene − 79245 79478 234 Locate
rps8 gene − 79604 80008 405 Locate
rpl14 gene − 80191 80559 369 Locate
rpl16 gene − 80693 81960 1268 Locate
rps3 gene − 82104 82766 663 Locate
rpl22 gene − 82751 83224 474 Locate
rps19 gene − 83289 83567 279 Locate
rpl2 gene − 83635 85113 1479 Locate
rpl23 gene − 85132 85413 282 Locate
trnI-CAU gene − 85579 85652 74 Locate
ycf2 gene + 85747 92577 6831 Locate
ycf15 gene + 92767 92916 150 Locate
trnL-CAA gene − 93177 93257 81 Locate
ndhB gene − 93829 96036 2208 Locate
rps7 gene − 96307 96774 468 Locate
rps12 gene − 96828 97620 793 Locate
trnV-GAC gene + 99282 99353 72 Locate
rrn16 gene + 99580 101070 1491 Locate
trnI-GAU gene + 101368 102386 1019 Locate
trnA-UGC gene + 102451 103329 879 Locate
rrn23 gene + 103501 106311 2811 Locate
rrn4.5 gene + 106410 106512 103 Locate
rrn5 gene + 106768 106888 121 Locate
trnR-ACG gene + 107132 107205 74 Locate
trnN-GUU gene − 107772 107843 72 Locate
ycf1 gene + 108185 109315 1131 Locate
ndhF gene − 109209 111440 2232 Locate
rpl32 gene + 111916 112086 171 Locate
trnL-UAG gene + 112851 112930 80 Locate
ccsA gene + 113019 113990 972 Locate
ndhD gene − 114222 115751 1530 Locate
psaC gene − 115842 116087 246 Locate
ndhE gene − 116343 116648 306 Locate
ndhG gene − 116863 117393 531 Locate
ndhI gene − 117753 118259 507 Locate
ndhA gene − 118340 120463 2124 Locate
ndhH gene − 120465 121646 1182 Locate
rps15 gene − 121761 122024 264 Locate
ycf1 gene − 122454 127994 5541 Locate
trnN-GUU gene + 128336 128407 72 Locate
trnR-ACG gene − 128974 129047 74 Locate
rrn5 gene − 129291 129411 121 Locate
rrn4.5 gene − 129667 129769 103 Locate
rrn23 gene − 129868 132678 2811 Locate
trnA-UGC gene − 132850 133728 879 Locate
trnI-GAU gene − 133793 134811 1019 Locate
rrn16 gene − 135109 136599 1491 Locate
trnV-GAC gene − 136826 136897 72 Locate
rps12 gene + 138559 139351 793 Locate
rps7 gene + 139405 139872 468 Locate
ndhB gene + 140143 142350 2208 Locate
trnL-CAA gene + 142922 143002 81 Locate
ycf15 gene − 143263 143412 150 Locate
ycf2 gene − 143602 150432 6831 Locate
trnI-CAU gene + 150527 150600 74 Locate
rpl23 gene + 150766 151047 282 Locate
rpl2 gene + 151066 152544 1479 Locate
Status Available
Accession NC_067649.1
Length 152,654 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources