Isodon bulleyanus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067651.1 · 11–85 bp · −
psbA · NC_067651.1 · 393–1,451 bp · −
trnK-UUU · NC_067651.1 · 1,683–4,263 bp · −
matK · NC_067651.1 · 2,003–3,523 bp · −
OOC39_pgp086 · NC_067651.1 · 4,789–5,934 bp · −
trnQ-UUG · NC_067651.1 · 6,880–6,951 bp · −
trnS-GCU · NC_067651.1 · 8,187–8,274 bp · −
atpA · NC_067651.1 · 10,161–11,684 bp · −
atpF · NC_067651.1 · 11,795–13,039 bp · −
atpH · NC_067651.1 · 13,331–13,576 bp · −
atpI · NC_067651.1 · 14,577–15,320 bp · −
rps2 · NC_067651.1 · 15,545–16,255 bp · −
rpoC2 · NC_067651.1 · 16,472–20,653 bp · −
rpoC1 · NC_067651.1 · 20,818–23,651 bp · −
rpoB · NC_067651.1 · 23,678–26,890 bp · −
psbM · NC_067651.1 · 29,395–29,499 bp · −
trnD-GUC · NC_067651.1 · 30,018–30,091 bp · −
trnY-GUA · NC_067651.1 · 30,202–30,285 bp · −
trnE-UUC · NC_067651.1 · 30,363–30,435 bp · −
trnS-UGA · NC_067651.1 · 35,100–35,192 bp · −
trnfM-CAU · NC_067651.1 · 36,225–36,298 bp · −
rps14 · NC_067651.1 · 36,444–36,746 bp · −
psaB · NC_067651.1 · 36,869–39,073 bp · −
psaA · NC_067651.1 · 39,099–41,351 bp · −
ycf3 · NC_067651.1 · 42,126–44,073 bp · −
rps4 · NC_067651.1 · 45,313–45,918 bp · −
trnT-UGU · NC_067651.1 · 46,315–46,387 bp · −
ndhJ · NC_067651.1 · 48,671–49,147 bp · −
ndhK · NC_067651.1 · 49,258–49,935 bp · −
ndhC · NC_067651.1 · 49,987–50,349 bp · −
trnV-UAC · NC_067651.1 · 51,306–51,961 bp · −
atpE · NC_067651.1 · 52,415–52,816 bp · −
atpB · NC_067651.1 · 52,813–54,309 bp · −
psbJ · NC_067651.1 · 64,014–64,136 bp · −
psbL · NC_067651.1 · 64,271–64,387 bp · −
psbF · NC_067651.1 · 64,411–64,530 bp · −
psbE · NC_067651.1 · 64,545–64,796 bp · −
trnW-CCA · NC_067651.1 · 66,195–66,268 bp · −
trnP-UGG · NC_067651.1 · 66,437–66,510 bp · −
rpl20 · NC_067651.1 · 68,293–68,679 bp · −
rps12 · NC_067651.1 · 69,413–69,526 bp · −
rps12 · NC_067651.1 · 96,832–97,624 bp · −
clpP · NC_067651.1 · 69,645–71,562 bp · −
psbN · NC_067651.1 · 73,913–74,044 bp · −
rpoA · NC_067651.1 · 77,427–78,434 bp · −
rps11 · NC_067651.1 · 78,507–78,923 bp · −
rpl36 · NC_067651.1 · 79,039–79,152 bp · −
infA · NC_067651.1 · 79,248–79,481 bp · −
rps8 · NC_067651.1 · 79,608–80,012 bp · −
rpl14 · NC_067651.1 · 80,195–80,563 bp · −
rpl16 · NC_067651.1 · 80,697–81,964 bp · −
rps3 · NC_067651.1 · 82,108–82,770 bp · −
rpl22 · NC_067651.1 · 82,755–83,228 bp · −
rps19 · NC_067651.1 · 83,293–83,571 bp · −
rpl2 · NC_067651.1 · 83,639–85,117 bp · −
rpl23 · NC_067651.1 · 85,136–85,417 bp · −
trnI-CAU · NC_067651.1 · 85,583–85,656 bp · −
trnL-CAA · NC_067651.1 · 93,181–93,261 bp · −
ndhB · NC_067651.1 · 93,833–96,040 bp · −
rps7 · NC_067651.1 · 96,311–96,778 bp · −
trnN-GUU · NC_067651.1 · 107,776–107,847 bp · −
ndhF · NC_067651.1 · 109,213–111,444 bp · −
ndhD · NC_067651.1 · 114,225–115,754 bp · −
psaC · NC_067651.1 · 115,845–116,090 bp · −
ndhE · NC_067651.1 · 116,346–116,651 bp · −
ndhG · NC_067651.1 · 116,866–117,396 bp · −
ndhI · NC_067651.1 · 117,755–118,261 bp · −
ndhA · NC_067651.1 · 118,342–120,463 bp · −
ndhH · NC_067651.1 · 120,465–121,646 bp · −
rps15 · NC_067651.1 · 121,761–122,033 bp · −
ycf1 · NC_067651.1 · 122,463–127,985 bp · −
trnR-ACG · NC_067651.1 · 128,965–129,038 bp · −
rrn5 · NC_067651.1 · 129,282–129,402 bp · −
rrn4.5 · NC_067651.1 · 129,658–129,760 bp · −
rrn23 · NC_067651.1 · 129,859–132,669 bp · −
trnA-UGC · NC_067651.1 · 132,841–133,719 bp · −
trnI-GAU · NC_067651.1 · 133,784–134,802 bp · −
rrn16 · NC_067651.1 · 135,100–136,590 bp · −
trnV-GAC · NC_067651.1 · 136,817–136,888 bp · −
ycf15 · NC_067651.1 · 143,254–143,403 bp · −
ycf2 · NC_067651.1 · 143,593–150,423 bp · −
psbK · NC_067651.1 · 7,345–7,530 bp · +
psbI · NC_067651.1 · 7,918–8,028 bp · +
trnG-UCC · NC_067651.1 · 9,037–9,795 bp · +
trnR-UCU · NC_067651.1 · 9,986–10,057 bp · +
trnC-GCA · NC_067651.1 · 28,080–28,150 bp · +
petN · NC_067651.1 · 28,313–28,402 bp · +
trnT-GGU · NC_067651.1 · 31,045–31,116 bp · +
psbD · NC_067651.1 · 32,434–33,495 bp · +
psbC · NC_067651.1 · 33,443–34,864 bp · +
psbZ · NC_067651.1 · 35,533–35,721 bp · +
trnG-GCC · NC_067651.1 · 35,966–36,036 bp · +
trnS-GGA · NC_067651.1 · 44,937–45,023 bp · +
trnL-UAA · NC_067651.1 · 47,073–47,637 bp · +
trnF-GAA · NC_067651.1 · 47,931–48,003 bp · +
trnM-CAU · NC_067651.1 · 52,142–52,214 bp · +
rbcL · NC_067651.1 · 55,100–56,533 bp · +
accD · NC_067651.1 · 57,232–58,713 bp · +
psaI · NC_067651.1 · 59,415–59,525 bp · +
ycf4 · NC_067651.1 · 59,972–60,526 bp · +
cemA · NC_067651.1 · 61,110–61,799 bp · +
petA · NC_067651.1 · 62,014–62,976 bp · +
petL · NC_067651.1 · 65,689–65,784 bp · +
petG · NC_067651.1 · 65,959–66,072 bp · +
psaJ · NC_067651.1 · 66,792–66,926 bp · +
rpl33 · NC_067651.1 · 67,386–67,586 bp · +
rps18 · NC_067651.1 · 67,753–68,058 bp · +
rps12 · NC_067651.1 · 138,550–139,342 bp · +
psbB · NC_067651.1 · 72,035–73,561 bp · +
psbT · NC_067651.1 · 73,746–73,847 bp · +
psbH · NC_067651.1 · 74,150–74,368 bp · +
petB · NC_067651.1 · 74,494–75,860 bp · +
petD · NC_067651.1 · 76,049–77,250 bp · +
ycf2 · NC_067651.1 · 85,751–92,581 bp · +
ycf15 · NC_067651.1 · 92,771–92,920 bp · +
trnV-GAC · NC_067651.1 · 99,286–99,357 bp · +
rrn16 · NC_067651.1 · 99,584–101,074 bp · +
trnI-GAU · NC_067651.1 · 101,372–102,390 bp · +
trnA-UGC · NC_067651.1 · 102,455–103,333 bp · +
rrn23 · NC_067651.1 · 103,505–106,315 bp · +
rrn4.5 · NC_067651.1 · 106,414–106,516 bp · +
rrn5 · NC_067651.1 · 106,772–106,892 bp · +
trnR-ACG · NC_067651.1 · 107,136–107,209 bp · +
ycf1 · NC_067651.1 · 108,189–109,319 bp · +
rpl32 · NC_067651.1 · 111,920–112,090 bp · +
trnL-UAG · NC_067651.1 · 112,854–112,933 bp · +
ccsA · NC_067651.1 · 113,022–113,993 bp · +
trnN-GUU · NC_067651.1 · 128,327–128,398 bp · +
rps7 · NC_067651.1 · 139,396–139,863 bp · +
ndhB · NC_067651.1 · 140,134–142,341 bp · +
trnL-CAA · NC_067651.1 · 142,913–142,993 bp · +
trnI-CAU · NC_067651.1 · 150,518–150,591 bp · +
rpl23 · NC_067651.1 · 150,757–151,038 bp · +
rpl2 · NC_067651.1 · 151,057–152,535 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon bulleyanus
ANNOTATED PLASTOME
NC_067651.1
152,645 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38161 76322 114484 152645 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC39_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
OOC39_pgp086 gene − 4789 5934 1146 Locate
trnQ-UUG gene − 6880 6951 72 Locate
psbK gene + 7345 7530 186 Locate
psbI gene + 7918 8028 111 Locate
trnS-GCU gene − 8187 8274 88 Locate
trnG-UCC gene + 9037 9795 759 Locate
trnR-UCU gene + 9986 10057 72 Locate
atpA gene − 10161 11684 1524 Locate
atpF gene − 11795 13039 1245 Locate
atpH gene − 13331 13576 246 Locate
atpI gene − 14577 15320 744 Locate
rps2 gene − 15545 16255 711 Locate
rpoC2 gene − 16472 20653 4182 Locate
rpoC1 gene − 20818 23651 2834 Locate
rpoB gene − 23678 26890 3213 Locate
trnC-GCA gene + 28080 28150 71 Locate
petN gene + 28313 28402 90 Locate
psbM gene − 29395 29499 105 Locate
trnD-GUC gene − 30018 30091 74 Locate
trnY-GUA gene − 30202 30285 84 Locate
trnE-UUC gene − 30363 30435 73 Locate
trnT-GGU gene + 31045 31116 72 Locate
psbD gene + 32434 33495 1062 Locate
psbC gene + 33443 34864 1422 Locate
trnS-UGA gene − 35100 35192 93 Locate
psbZ gene + 35533 35721 189 Locate
trnG-GCC gene + 35966 36036 71 Locate
trnfM-CAU gene − 36225 36298 74 Locate
rps14 gene − 36444 36746 303 Locate
psaB gene − 36869 39073 2205 Locate
psaA gene − 39099 41351 2253 Locate
ycf3 gene − 42126 44073 1948 Locate
trnS-GGA gene + 44937 45023 87 Locate
rps4 gene − 45313 45918 606 Locate
trnT-UGU gene − 46315 46387 73 Locate
trnL-UAA gene + 47073 47637 565 Locate
trnF-GAA gene + 47931 48003 73 Locate
ndhJ gene − 48671 49147 477 Locate
ndhK gene − 49258 49935 678 Locate
ndhC gene − 49987 50349 363 Locate
trnV-UAC gene − 51306 51961 656 Locate
trnM-CAU gene + 52142 52214 73 Locate
atpE gene − 52415 52816 402 Locate
atpB gene − 52813 54309 1497 Locate
rbcL gene + 55100 56533 1434 Locate
accD gene + 57232 58713 1482 Locate
psaI gene + 59415 59525 111 Locate
ycf4 gene + 59972 60526 555 Locate
cemA gene + 61110 61799 690 Locate
petA gene + 62014 62976 963 Locate
psbJ gene − 64014 64136 123 Locate
psbL gene − 64271 64387 117 Locate
psbF gene − 64411 64530 120 Locate
psbE gene − 64545 64796 252 Locate
petL gene + 65689 65784 96 Locate
petG gene + 65959 66072 114 Locate
trnW-CCA gene − 66195 66268 74 Locate
trnP-UGG gene − 66437 66510 74 Locate
psaJ gene + 66792 66926 135 Locate
rpl33 gene + 67386 67586 201 Locate
rps18 gene + 67753 68058 306 Locate
rpl20 gene − 68293 68679 387 Locate
rps12 gene − 69413 69526 114 Locate
clpP gene − 69645 71562 1918 Locate
psbB gene + 72035 73561 1527 Locate
psbT gene + 73746 73847 102 Locate
psbN gene − 73913 74044 132 Locate
psbH gene + 74150 74368 219 Locate
petB gene + 74494 75860 1367 Locate
petD gene + 76049 77250 1202 Locate
rpoA gene − 77427 78434 1008 Locate
rps11 gene − 78507 78923 417 Locate
rpl36 gene − 79039 79152 114 Locate
infA gene − 79248 79481 234 Locate
rps8 gene − 79608 80012 405 Locate
rpl14 gene − 80195 80563 369 Locate
rpl16 gene − 80697 81964 1268 Locate
rps3 gene − 82108 82770 663 Locate
rpl22 gene − 82755 83228 474 Locate
rps19 gene − 83293 83571 279 Locate
rpl2 gene − 83639 85117 1479 Locate
rpl23 gene − 85136 85417 282 Locate
trnI-CAU gene − 85583 85656 74 Locate
ycf2 gene + 85751 92581 6831 Locate
ycf15 gene + 92771 92920 150 Locate
trnL-CAA gene − 93181 93261 81 Locate
ndhB gene − 93833 96040 2208 Locate
rps7 gene − 96311 96778 468 Locate
rps12 gene − 96832 97624 793 Locate
trnV-GAC gene + 99286 99357 72 Locate
rrn16 gene + 99584 101074 1491 Locate
trnI-GAU gene + 101372 102390 1019 Locate
trnA-UGC gene + 102455 103333 879 Locate
rrn23 gene + 103505 106315 2811 Locate
rrn4.5 gene + 106414 106516 103 Locate
rrn5 gene + 106772 106892 121 Locate
trnR-ACG gene + 107136 107209 74 Locate
trnN-GUU gene − 107776 107847 72 Locate
ycf1 gene + 108189 109319 1131 Locate
ndhF gene − 109213 111444 2232 Locate
rpl32 gene + 111920 112090 171 Locate
trnL-UAG gene + 112854 112933 80 Locate
ccsA gene + 113022 113993 972 Locate
ndhD gene − 114225 115754 1530 Locate
psaC gene − 115845 116090 246 Locate
ndhE gene − 116346 116651 306 Locate
ndhG gene − 116866 117396 531 Locate
ndhI gene − 117755 118261 507 Locate
ndhA gene − 118342 120463 2122 Locate
ndhH gene − 120465 121646 1182 Locate
rps15 gene − 121761 122033 273 Locate
ycf1 gene − 122463 127985 5523 Locate
trnN-GUU gene + 128327 128398 72 Locate
trnR-ACG gene − 128965 129038 74 Locate
rrn5 gene − 129282 129402 121 Locate
rrn4.5 gene − 129658 129760 103 Locate
rrn23 gene − 129859 132669 2811 Locate
trnA-UGC gene − 132841 133719 879 Locate
trnI-GAU gene − 133784 134802 1019 Locate
rrn16 gene − 135100 136590 1491 Locate
trnV-GAC gene − 136817 136888 72 Locate
rps12 gene + 138550 139342 793 Locate
rps7 gene + 139396 139863 468 Locate
ndhB gene + 140134 142341 2208 Locate
trnL-CAA gene + 142913 142993 81 Locate
ycf15 gene − 143254 143403 150 Locate
ycf2 gene − 143593 150423 6831 Locate
trnI-CAU gene + 150518 150591 74 Locate
rpl23 gene + 150757 151038 282 Locate
rpl2 gene + 151057 152535 1479 Locate
Status Available
Accession NC_067651.1
Length 152,645 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources