Coordinate-aware organelle record

Isodon calcicola chloroplast genome

Available NC_067652.1 152,594 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4263	2581
matK	gene	other	−	2002	3523	1521
OOC38_pgp086	gene	other	−	4789	5929	1140
trnQ-UUG	gene	translation-rna	−	6867	6939	72
psbK	gene	photosystem-ii	+	7332	7518	186
psbI	gene	photosystem-ii	+	7904	8015	111
trnS-GCU	gene	translation-rna	−	8169	8257	88
trnG-UCC	gene	translation-rna	+	9018	9779	761
trnR-UCU	gene	translation-rna	+	9969	10041	72
atpA	gene	atp-synthase	−	10144	11668	1524
atpF	gene	atp-synthase	−	11769	13014	1245
atpH	gene	atp-synthase	−	13305	13551	246
atpI	gene	atp-synthase	−	14551	15295	744
rps2	gene	ribosomal-protein	−	15520	16231	711
rpoC2	gene	rna-polymerase	−	16445	20627	4182
rpoC1	gene	rna-polymerase	−	20791	23625	2834
rpoB	gene	rna-polymerase	−	23651	26864	3213
trnC-GCA	gene	translation-rna	+	28053	28124	71
petN	gene	cytochrome	+	28286	28376	90
psbM	gene	photosystem-ii	−	29350	29455	105
trnD-GUC	gene	translation-rna	−	29938	30012	74
trnY-GUA	gene	translation-rna	−	30122	30206	84
trnE-UUC	gene	translation-rna	−	30283	30356	73
trnT-GGU	gene	translation-rna	+	30965	31037	72
psbD	gene	photosystem-ii	+	32354	33416	1062
psbC	gene	photosystem-ii	+	33363	34785	1422
trnS-UGA	gene	translation-rna	−	35020	35113	93
psbZ	gene	photosystem-ii	+	35453	35642	189
trnG-GCC	gene	translation-rna	+	35886	35957	71
trnfM-CAU	gene	translation-rna	−	36145	36219	74
rps14	gene	ribosomal-protein	−	36364	36667	303
psaB	gene	photosystem-i	−	36789	38994	2205
psaA	gene	photosystem-i	−	39019	41272	2253
ycf3	gene	other	−	42045	43993	1948
trnS-GGA	gene	translation-rna	+	44856	44943	87
rps4	gene	ribosomal-protein	−	45239	45845	606
trnT-UGU	gene	translation-rna	−	46269	46342	73
trnL-UAA	gene	translation-rna	+	47041	47585	544
trnF-GAA	gene	translation-rna	+	47878	47951	73
ndhJ	gene	nad-dehydrogenase	−	48618	49095	477
ndhK	gene	nad-dehydrogenase	−	49205	49883	678
ndhC	gene	nad-dehydrogenase	−	49934	50297	363
trnV-UAC	gene	translation-rna	−	51253	51909	656
trnM-CAU	gene	translation-rna	+	52089	52162	73
atpE	gene	atp-synthase	−	52362	52764	402
atpB	gene	atp-synthase	−	52760	54257	1497
rbcL	gene	other	+	55048	56482	1434
accD	gene	other	+	57186	58668	1482
psaI	gene	photosystem-i	+	59368	59479	111
ycf4	gene	other	+	59925	60480	555
cemA	gene	other	+	61070	61760	690
petA	gene	cytochrome	+	61974	62937	963
psbJ	gene	photosystem-ii	−	63975	64098	123
psbL	gene	photosystem-ii	−	64232	64349	117
psbF	gene	photosystem-ii	−	64372	64492	120
psbE	gene	photosystem-ii	−	64506	64758	252
petL	gene	cytochrome	+	65650	65746	96
petG	gene	cytochrome	+	65920	66034	114
trnW-CCA	gene	translation-rna	−	66156	66230	74
trnP-UGG	gene	translation-rna	−	66398	66472	74
psaJ	gene	photosystem-i	+	66753	66888	135
rpl33	gene	ribosomal-protein	+	67350	67551	201
rps18	gene	ribosomal-protein	+	67717	68023	306
rpl20	gene	ribosomal-protein	−	68257	68644	387
rps12	gene	ribosomal-protein	−	69379	97582	28203
rps12	gene	ribosomal-protein	+	69379	139291	69912
clpP	gene	other	−	69611	71529	1918
psbB	gene	photosystem-ii	+	72001	73528	1527
psbT	gene	photosystem-ii	+	73711	73813	102
psbN	gene	photosystem-ii	−	73878	74010	132
psbH	gene	photosystem-ii	+	74115	74334	219
petB	gene	cytochrome	+	74459	75828	1369
petD	gene	cytochrome	+	76016	77209	1193
rpoA	gene	rna-polymerase	−	77385	78393	1008
rps11	gene	ribosomal-protein	−	78464	78881	417
rpl36	gene	ribosomal-protein	−	78996	79110	114
infA	gene	other	−	79205	79439	234
rps8	gene	ribosomal-protein	−	79565	79970	405
rpl14	gene	ribosomal-protein	−	80152	80521	369
rpl16	gene	ribosomal-protein	−	80654	81922	1268
rps3	gene	ribosomal-protein	−	82065	82728	663
rpl22	gene	ribosomal-protein	−	82712	83186	474
rps19	gene	ribosomal-protein	−	83250	83529	279
rpl2	gene	ribosomal-protein	−	83596	85075	1479
rpl23	gene	ribosomal-protein	−	85093	85375	282
trnI-CAU	gene	translation-rna	−	85540	85614	74
ycf2	gene	other	+	85708	92539	6831
ycf15	gene	other	+	92728	92878	150
trnL-CAA	gene	translation-rna	−	93138	93219	81
ndhB	gene	nad-dehydrogenase	−	93790	95998	2208
rps7	gene	ribosomal-protein	−	96268	96736	468
trnV-GAC	gene	translation-rna	+	99238	99310	72
rrn16	gene	ribosomal-rna	+	99536	101027	1491
trnI-GAU	gene	translation-rna	+	101324	102343	1019
trnA-UGC	gene	translation-rna	+	102407	103286	879
rrn23	gene	ribosomal-rna	+	103457	106268	2811
rrn4.5	gene	ribosomal-rna	+	106366	106469	103
rrn5	gene	ribosomal-rna	+	106724	106845	121
trnR-ACG	gene	translation-rna	+	107088	107162	74
trnN-GUU	gene	translation-rna	−	107728	107800	72
ycf1	gene	other	+	108141	109272	1131
ndhF	gene	nad-dehydrogenase	−	109165	111397	2232
rpl32	gene	ribosomal-protein	+	111865	112036	171
trnL-UAG	gene	translation-rna	+	112799	112879	80
ccsA	gene	other	+	112967	113939	972
ndhD	gene	nad-dehydrogenase	−	114170	115700	1530
psaC	gene	photosystem-i	−	115790	116036	246
ndhE	gene	nad-dehydrogenase	−	116291	116597	306
ndhG	gene	nad-dehydrogenase	−	116811	117342	531
ndhI	gene	nad-dehydrogenase	−	117700	118207	507
ndhA	gene	nad-dehydrogenase	−	118287	120411	2124
ndhH	gene	nad-dehydrogenase	−	120412	121594	1182
rps15	gene	ribosomal-protein	−	121708	121981	273
ycf1	gene	other	−	122410	127939	5529
trnN-GUU	gene	translation-rna	+	128280	128352	72
trnR-ACG	gene	translation-rna	−	128918	128992	74
rrn5	gene	ribosomal-rna	−	129235	129356	121
rrn4.5	gene	ribosomal-rna	−	129611	129714	103
rrn23	gene	ribosomal-rna	−	129812	132623	2811
trnA-UGC	gene	translation-rna	−	132794	133673	879
trnI-GAU	gene	translation-rna	−	133737	134756	1019
rrn16	gene	ribosomal-rna	−	135053	136544	1491
trnV-GAC	gene	translation-rna	−	136770	136842	72
rps7	gene	ribosomal-protein	+	139344	139812	468
ndhB	gene	nad-dehydrogenase	+	140082	142290	2208
trnL-CAA	gene	translation-rna	+	142861	142942	81
ycf15	gene	other	−	143202	143352	150
ycf2	gene	other	−	143541	150372	6831
trnI-CAU	gene	translation-rna	+	150466	150540	74
rpl23	gene	ribosomal-protein	+	150705	150987	282
rpl2	gene	ribosomal-protein	+	151005	152484	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067652.1DNA · accDNC_067652DNA · atpBNC_067652DNA · matKNC_067652DNA · ndhFNC_067652DNA · psbANC_067652DNA · rbcLNC_067652DNA · rps12NC_067652DNA · ycf1NC_067652